Clone Name | rbastl33d05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC151366.3| Aotus nancymaae clone CH258-105B22, complete sequence Length = 188026 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcactcatctatggaaacaa 155 |||||||||||||||||||| Sbjct: 132499 tcactcatctatggaaacaa 132518
>gb|AY625267.1| Mus musculus l-arginine:glycine amidinotransferase mRNA, partial cds Length = 718 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 274 gacaacagcacccaagccca 293
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aacaactgacacaacaatgt 173 |||||||||||||||||||| Sbjct: 196678 aacaactgacacaacaatgt 196659
>gb|AC148207.4| Callicebus moloch clone LB5-404B3, complete sequence Length = 175081 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcactcatctatggaaacaa 155 |||||||||||||||||||| Sbjct: 78186 tcactcatctatggaaacaa 78205
>gb|AC131786.3| Mus musculus BAC clone RP24-397H7 from chromosome 5, complete sequence Length = 176338 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 aaaccaaaatatactcctta 37 |||||||||||||||||||| Sbjct: 127179 aaaccaaaatatactcctta 127160
>gb|AC146757.19| Medicago truncatula clone mth2-16n21, complete sequence Length = 135915 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcatctatggaaacaacaac 159 |||||||||||||||||||| Sbjct: 107134 tcatctatggaaacaacaac 107115
>gb|AC147536.12| Medicago truncatula clone mth2-9l3, complete sequence Length = 111486 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tcatctatggaaacaacaac 159 |||||||||||||||||||| Sbjct: 82702 tcatctatggaaacaacaac 82683
>emb|AL390718.11| Human DNA sequence from clone RP11-502H18 on chromosome 1 Contains the 3' end of a novel gene, a novel gene, the QSCN6 gene for quiescin Q6 and a CpG island, complete sequence Length = 176123 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 aaaaagggaatatcacaacatgta 87 |||||| ||||||||||||||||| Sbjct: 14823 aaaaagagaatatcacaacatgta 14800
>emb|AL009029.1|HS164C20 Human DNA sequence from clone RP1-164C20 on chromosome 6q16.1-22.1, complete sequence Length = 161475 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttaccaacagtacaacatat 54 |||||||||||||||||||| Sbjct: 32446 ttaccaacagtacaacatat 32427
>gb|BC003879.1| Mus musculus glycine amidinotransferase (L-arginine:glycine amidinotransferase), mRNA (cDNA clone MGC:6646 IMAGE:3495871), complete cds Length = 2419 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 696 gacaacagcacccaagccca 715
>gb|AC093549.1| Drosophila melanogaster 3L BAC RP98-14L10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180633 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 143 tctatggaaacaacaactgacacaacaa 170 ||||||| ||||||||||| |||||||| Sbjct: 69006 tctatggcaacaacaactgccacaacaa 69033
>ref|NM_025961.2| Mus musculus glycine amidinotransferase (L-arginine:glycine amidinotransferase) (Gatm), mRNA Length = 2419 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 696 gacaacagcacccaagccca 715
>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14, complete sequence Length = 197865 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaaaacaagtctcaaaccaa 24 |||||||||||||||||||| Sbjct: 176119 aaaaacaagtctcaaaccaa 176138
>gb|AC012123.8| Homo sapiens chromosome 18, clone RP11-57G22, complete sequence Length = 193486 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 aaaaacaagtctcaaaccaaaata 28 ||||||||||||||| |||||||| Sbjct: 189818 aaaaacaagtctcaagccaaaata 189795
>dbj|AK152069.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047A18 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 2351 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 692 gacaacagcacccaagccca 711
>dbj|AK146111.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530030O12 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 2358 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 692 gacaacagcacccaagccca 711
>dbj|AK146052.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530026P04 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 2357 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 690 gacaacagcacccaagccca 709
>dbj|AK145914.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530014H16 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 2362 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 693 gacaacagcacccaagccca 712
>dbj|AK145862.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530009G08 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 2353 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 693 gacaacagcacccaagccca 712
>dbj|AK151313.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830027P09 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 690 gacaacagcacccaagccca 709
>dbj|AK153450.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830162M15 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 1937 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 676 gacaacagcacccaagccca 695
>dbj|AK007325.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810003P21 product:glycine amidinotransferase (L-arginine:glycine amidinotransferase), full insert sequence Length = 1955 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 691 gacaacagcacccaagccca 710
>gb|AC025887.4|AC025887 Homo sapiens chromosome , clone RP11-386P4, complete sequence Length = 150655 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 aaaaacaagtctcaaaccaaaata 28 ||||||||||||||| |||||||| Sbjct: 109433 aaaaacaagtctcaagccaaaata 109456
>gb|AC068919.4| Homo sapiens BAC clone RP11-340I19 from 2, complete sequence Length = 164350 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 agattttccaggagtaaaac 331 |||||||||||||||||||| Sbjct: 135664 agattttccaggagtaaaac 135645
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 aacaagtctcaaaccaaaatatac 31 |||||||| ||||||||||||||| Sbjct: 1593583 aacaagtcacaaaccaaaatatac 1593560
>emb|BX293537.10| Mouse DNA sequence from clone RP23-240M8 on chromosome X, complete sequence Length = 163726 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 atgaaatgttcaatgtcttc 271 |||||||||||||||||||| Sbjct: 17395 atgaaatgttcaatgtcttc 17376
>gb|AE003561.3| Drosophila melanogaster chromosome 3L, section 24 of 83 of the complete sequence Length = 274289 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 143 tctatggaaacaacaactgacacaacaa 170 ||||||| ||||||||||| |||||||| Sbjct: 218175 tctatggcaacaacaactgccacaacaa 218202
>gb|AC169088.2| Gallus gallus BAC clone CH261-100B3 from chromosome ul, complete sequence Length = 214859 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tctatggaaacaacaactga 162 |||||||||||||||||||| Sbjct: 181935 tctatggaaacaacaactga 181954
>gb|AC004715.1|AC004715 Drosophila melanogaster DNA sequence (P1 DS00374 (D264)), complete sequence Length = 72732 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 143 tctatggaaacaacaactgacacaacaa 170 ||||||| ||||||||||| |||||||| Sbjct: 60079 tctatggcaacaacaactgccacaacaa 60106
>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete sequence Length = 118199 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 actgacattcatataaacga 119 |||||||||||||||||||| Sbjct: 29722 actgacattcatataaacga 29703
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 tcactcatctatggaaacaa 155 |||||||||||||||||||| Sbjct: 2008108 tcactcatctatggaaacaa 2008127
>emb|AL772253.12| Mouse DNA sequence from clone RP23-101F14 on chromosome 2, complete sequence Length = 156657 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gacaacagcacccaagccca 244 |||||||||||||||||||| Sbjct: 38246 gacaacagcacccaagccca 38227 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,288,200 Number of Sequences: 3902068 Number of extensions: 4288200 Number of successful extensions: 89560 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89485 Number of HSP's gapped (non-prelim): 75 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)