>OMPB3_NEIMB (P30688) Major outer membrane protein P.IB precursor (Protein IB)|
           (PIB) (Porin) (Class 3 protein)
          Length = 331

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -2

Query: 428 DVLQILLRCEQAHRKTIDEKTTASEYDAAPLLPAVRGGSRRKRLSDAADGKGSFDDVVLR 249
           D L   +  +Q   K +++  + +         A R G+   R+S A   KGSFDD  L 
Sbjct: 223 DALHASVAVQQQDAKLVEDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFDDADLS 282

Query: 248 N----A*VTSEYSCTRYISSIPS 192
           N      V +EY  ++  S++ S
Sbjct: 283 NDYDQVVVGAEYDFSKRTSALVS 305


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,976,812
Number of Sequences: 219361
Number of extensions: 785825
Number of successful extensions: 1723
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)