Clone Name | rbastl33d02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 375 acctgcaactaaaactgcgagttgctgaggaatgtgaccatgcatcgtgcgctctgaaac 434 |||||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 25928211 acctgctactaaaactgtgagttgctgaggaatgtaaccatgcatcgtgcactctgaaac 25928152 Query: 435 attttgtcgatcttctgcca 454 | |||||| ||||||||||| Sbjct: 25928151 actttgtctatcttctgcca 25928132 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 12739476 gtatgcattgatttccgagatttg 12739453
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 375 acctgcaactaaaactgcgagttgctgaggaatgtgaccatgcatcgtgcgctctgaaac 434 |||||| |||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 83309 acctgctactaaaactgtgagttgctgaggaatgtaaccatgcatcgtgcactctgaaac 83250 Query: 435 attttgtcgatcttctgcca 454 | |||||| ||||||||||| Sbjct: 83249 actttgtctatcttctgcca 83230
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||||||||||||| Sbjct: 11043587 gtatgcattgatttcagagatttg 11043564 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||||| |||||| Sbjct: 13393010 gtatgcattgatttcagggatttg 13392987
>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_C03 Length = 112383 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||||||||||||| Sbjct: 69394 gtatgcattgatttcagagatttg 69371
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||||||||||||| Sbjct: 2394 gtatgcattgatttcagagatttg 2371
>gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, complete sequence Length = 156840 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cagaatggtacaacagccaca 339 ||||||||||||||||||||| Sbjct: 156011 cagaatggtacaacagccaca 155991
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aaaacccccaaagatgaacacagag 80 |||||||||||||| |||||||||| Sbjct: 152717 aaaacccccaaagaagaacacagag 152693
>emb|CR753866.9| Zebrafish DNA sequence from clone DKEYP-110C7 in linkage group 5, complete sequence Length = 72925 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tcattatagtaaaatgctgaa 106 ||||||||||||||||||||| Sbjct: 38492 tcattatagtaaaatgctgaa 38512
>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5, complete sequence Length = 198695 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tcattatagtaaaatgctgaa 106 ||||||||||||||||||||| Sbjct: 177336 tcattatagtaaaatgctgaa 177356
>gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complete sequence Length = 147091 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gaattgaagggattttagaat 53 ||||||||||||||||||||| Sbjct: 38664 gaattgaagggattttagaat 38644
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete sequence Length = 224461 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gggattttagaattcaaaacc 61 ||||||||||||||||||||| Sbjct: 189723 gggattttagaattcaaaacc 189703
>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence Length = 226568 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 aaaacccccaaagatgaacacagag 80 |||||||||||||| |||||||||| Sbjct: 48962 aaaacccccaaagaagaacacagag 48938
>emb|CR405701.20| Zebrafish DNA sequence from clone CH211-45M20 in linkage group 5, complete sequence Length = 125284 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 tcattatagtaaaatgctgaa 106 ||||||||||||||||||||| Sbjct: 19986 tcattatagtaaaatgctgaa 19966
>ref|XM_475025.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3498 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 1492 tgcattgatttcagagattt 1511
>ref|XM_471288.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1914 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 1039 tgcattgatttcagagattt 1058
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 92593 gtatgcattgattttagagatttg 92616
>gb|BC077893.1| Xenopus laevis MGC80709 protein, mRNA (cDNA clone MGC:80709 IMAGE:5511725), complete cds Length = 2037 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tacaggaacaaaactgcaaa 216 |||||||||||||||||||| Sbjct: 1405 tacaggaacaaaactgcaaa 1424
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 98120 tgcattgatttcagagattt 98139
>gb|BC046275.1| Mus musculus myotubularin related protein 9, mRNA (cDNA clone MGC:54783 IMAGE:6307469), complete cds Length = 2457 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 2043 tgtgaacatgaattgaaggg 2024
>gb|AC120788.7| Mus musculus chromosome 14, clone RP23-279B13, complete sequence Length = 215810 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 60517 tgtgaacatgaattgaaggg 60536
>emb|CR954964.4| Mouse DNA sequence from clone RP24-201A22 on chromosome X, complete sequence Length = 59913 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 30204 atgctgaagaagcattctag 30185
>ref|XM_733144.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302353.00.0) partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ttacaaaagaatacaggaacaaaa 209 |||||||| ||||||||||||||| Sbjct: 403 ttacaaaataatacaggaacaaaa 426
>ref|XM_738904.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000132.02.0) partial mRNA Length = 702 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ttacaaaagaatacaggaacaaaa 209 |||||||| ||||||||||||||| Sbjct: 403 ttacaaaataatacaggaacaaaa 426
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 31765 gtatgcattgatttccgagatttg 31788
>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 53816 tgcattgatttcagagattt 53797
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 125691 tgcattgatttcagagattt 125672
>dbj|AK152320.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830061M19 product:myotubularin related protein 9, full insert sequence Length = 2188 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 1829 tgtgaacatgaattgaaggg 1810
>emb|CR406732.1| Gallus gallus finished cDNA, clone ChEST989n3 Length = 1029 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 aacaaaactgcaaaactgtt 222 |||||||||||||||||||| Sbjct: 326 aacaaaactgcaaaactgtt 345
>emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chromosome X, complete sequence Length = 233474 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 90641 atgctgaagaagcattctag 90660
>dbj|AK035026.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430075G12 product:PUTATIVE MYOTUBULARIN RELATED PROTEIN 8 homolog [Homo sapiens], full insert sequence Length = 2556 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 2058 tgtgaacatgaattgaaggg 2039
>dbj|AK044957.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130015P11 product:PUTATIVE MYOTUBULARIN RELATED PROTEIN 8 homolog [Homo sapiens], full insert sequence Length = 2432 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 2073 tgtgaacatgaattgaaggg 2054
>emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chromosome X, complete sequence Length = 184662 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 136057 atgctgaagaagcattctag 136076 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 5258 atgctgaagaagcattctag 5277
>emb|BX936348.7| Mouse DNA sequence from clone RP23-348D19 on chromosome X, complete sequence Length = 62362 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 39005 atgctgaagaagcattctag 39024
>emb|BX936354.6| Mouse DNA sequence from clone RP23-354D7 on chromosome X, complete sequence Length = 72633 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 29710 atgctgaagaagcattctag 29729
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 9527573 tgcattgatttcagagattt 9527554 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 8869507 tgcattgatttcagagattt 8869488 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 1372741 gtatgcattgatttccgagatttg 1372764
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 20217016 gtatgcattgattttagagatttg 20217039 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 17259748 gtatgcattgattttagagatttg 17259771 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 14369110 tgcattgatttcagagattt 14369129
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 11521195 gtatgcattgattttagagatttg 11521172
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 19970451 gtatgcattgatttccgagatttg 19970428 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 10700471 gtatgcattgattttagagatttg 10700494 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 4868539 gtatgcattgattttagagatttg 4868516 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 2728045 tgcattgatttcagagattt 2728026 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 1963986 tgcattgatttcagagattt 1964005
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 16128614 gtatgcattgattttagagatttg 16128591 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 15756890 gtatgcattgattttagagatttg 15756913
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 14018043 tgcattgatttcagagattt 14018062
>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12, complete sequence Length = 130499 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 75534 gtatgcattgatttccgagatttg 75557
>gb|AC010663.6| Drosophila melanogaster 3L BAC RP98-17M18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193914 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgtgaccatgcatcgtgcgc 426 |||||||||||||||||||| Sbjct: 107456 tgtgaccatgcatcgtgcgc 107475
>gb|AC117276.7| Drosophila melanogaster 3 BAC RP98-29A7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 146426 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tgtgaccatgcatcgtgcgc 426 |||||||||||||||||||| Sbjct: 133052 tgtgaccatgcatcgtgcgc 133033
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tcaaaacccccaaagatgaa 73 |||||||||||||||||||| Sbjct: 99996 tcaaaacccccaaagatgaa 99977
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 98947 gtatgcattgattttagagatttg 98924
>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0433E10 Length = 144643 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 138629 gtatgcattgatttccgagatttg 138606
>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470H09 Length = 141257 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 106326 tgcattgatttcagagattt 106307
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 92997 gtatgcattgatttccgagatttg 92974
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 40253 gtatgcattgatttccgagatttg 40230
>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0075N02 Length = 186945 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 154747 gtatgcattgattttagagatttg 154770
>emb|BX664729.3| Mouse DNA sequence from clone RP24-251C18 on chromosome X, complete sequence Length = 52210 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 51731 atgctgaagaagcattctag 51750
>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025E03 Length = 156806 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||||| |||||| Sbjct: 64354 gtatgcattgatttcagggatttg 64331
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 89184 tgcattgatttcagagattt 89203
>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0509D04 Length = 140666 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 113021 tgcattgatttcagagattt 113040
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 27793 gtatgcattgattttagagatttg 27770
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 73333 gtatgcattgattttagagatttg 73310
>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete sequence Length = 181910 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 1521 atgctgaagaagcattctag 1540
>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0477F03 Length = 176120 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 ||||||||||||||| |||||||| Sbjct: 42302 gtatgcattgatttccgagatttg 42279
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 128111 gtatgcattgattttagagatttg 128134
>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence Length = 168468 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagcagcacaatctctgtgg 252 |||||||||||||||||||| Sbjct: 138094 cagcagcacaatctctgtgg 138075
>gb|AE002786.2| Drosophila melanogaster chromosome 3L, section 81 of 83 of the complete sequence Length = 100825 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tgtgaccatgcatcgtgcgc 426 |||||||||||||||||||| Sbjct: 27436 tgtgaccatgcatcgtgcgc 27455
>gb|AF073881.1|AF073881 Mus musculus myotubularin homologous protein 3 mRNA, partial cds Length = 940 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 565 tgtgaacatgaattgaaggg 546
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 11600384 gtatgcattgattttagagatttg 11600361
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 20143230 gtatgcattgattttagagatttg 20143253 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 17214119 gtatgcattgattttagagatttg 17214142 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 14323392 tgcattgatttcagagattt 14323411
>emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chromosome 2, complete sequence Length = 197462 Score = 40.1 bits (20), Expect = 6.1 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 46 tttagaattcaaaacccccaaagatgaacaca 77 ||||||||||| ||||||||||| |||||||| Sbjct: 164045 tttagaattcagaacccccaaag-tgaacaca 164015
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09, complete sequence Length = 160462 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 9679 tgcattgatttcagagattt 9660
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgcattgatttcagagattt 372 |||||||||||||||||||| Sbjct: 76314 tgcattgatttcagagattt 76333
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 81250 gtatgcattgattttagagatttg 81273
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154826 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtatgcattgatttcagagatttg 373 |||||||||||||| ||||||||| Sbjct: 143621 gtatgcattgattttagagatttg 143598
>emb|CR354601.14| Mouse DNA sequence from clone RP23-395J7 on chromosome X, complete sequence Length = 96754 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 33114 atgctgaagaagcattctag 33133
>emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chromosome X, complete sequence Length = 240890 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 174603 atgctgaagaagcattctag 174622 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 83600 atgctgaagaagcattctag 83619
>emb|CR954961.8| Mouse DNA sequence from clone RP23-145L13 on chromosome X, complete sequence Length = 59596 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 50209 atgctgaagaagcattctag 50228
>ref|NM_177594.1| Mus musculus myotubularin related protein 9 (Mtmr9), mRNA Length = 2457 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tgtgaacatgaattgaaggg 43 |||||||||||||||||||| Sbjct: 2043 tgtgaacatgaattgaaggg 2024
>emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on chromosome X, complete sequence Length = 204157 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 122455 atgctgaagaagcattctag 122436 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 32871 atgctgaagaagcattctag 32852
>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 136807 atgctgaagaagcattctag 136826
>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete sequence Length = 174151 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 169811 atgctgaagaagcattctag 169830 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 atgctgaagaagcattctag 118 |||||||||||||||||||| Sbjct: 53778 atgctgaagaagcattctag 53797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,691,042 Number of Sequences: 3902068 Number of extensions: 4691042 Number of successful extensions: 92418 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 91608 Number of HSP's gapped (non-prelim): 811 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)