ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197653.1| Oryza sativa (japonica cultivar-group) unknown ... 256 5e-65
2gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 geno... 256 5e-65
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 256 5e-65
4dbj|AK065729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 256 5e-65
6gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
7gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, co... 42 1.4
8gb|AC123051.4| Mus musculus BAC clone RP24-366E4 from chromosome... 42 1.4
9gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Can... 42 1.4
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
11gb|AC161885.3| Gallus gallus BAC clone CH261-15B19 from chromoso... 42 1.4
12ref|XM_471647.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
13gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, par... 40 5.5
14emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chr... 40 5.5
15emb|AL935184.16| Zebrafish DNA sequence from clone DKEY-30K22 in... 40 5.5
16emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
17dbj|AB051418.1| Carabus insulicola DNA, microsatellite Cins26 40 5.5
18ref|XM_689716.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 5.5
19emb|BX005365.16| Zebrafish DNA sequence from clone DKEY-237I1 in... 40 5.5
20dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
22gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 40 5.5
23dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
24gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosom... 40 5.5
25gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome... 40 5.5
26emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chr... 40 5.5 
>ref|NM_197653.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0082M15.1), mRNA
          Length = 3576

 Score =  256 bits (129), Expect = 5e-65
 Identities = 303/361 (83%)
 Strand = Plus / Minus

                                                                        
Query: 12   tctgatcagagtttcaaatccacaaatcgaaaacagcctcatcgataagttcgtctaaca 71
            ||||||||||  |||||||||||||||| ||||| |||||||| || | ||| |||||||
Sbjct: 3107 tctgatcagaacttcaaatccacaaatcaaaaaccgcctcatctatcaattcatctaaca 3048

                                                                        
Query: 72   caaactcccatatctccacaacgatcccttcagtcttcgaccgaatgtccatccatgtcc 131
            ||||||||||||||||||| || || ||||| ||||| || | |||||||||||||| | 
Sbjct: 3047 caaactcccatatctccacgacaattccttctgtctttgatctaatgtccatccatgcct 2988

                                                                        
Query: 132  gaacttccaaatcctttttgatcgtatgatctaatgtactcggaaaactatgtcggaggt 191
            |||| ||||||||| |||| ||  | || || |||||||| || ||||||     ||| |
Sbjct: 2987 gaacctccaaatcccttttaattatctgttccaatgtacttgggaaactacacttgagat 2928

                                                                        
Query: 192  aatcatcaacatatttgtcaacttctgcgacgaggtcttctccaattgggggtggcctta 251
            || |||||||||||||||||||||||| || ||| | |||||| |  || |||| || ||
Sbjct: 2927 aaccatcaacatatttgtcaacttctgagatgagtttttctcctaccggaggtgtccgta 2868

                                                                        
Query: 252  tgtcgtgtttgagaaacgataaccaagaagagagtctaaaatatctctcctggatctctg 311
            |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2867 tgtcatgtttgacaaaagataaccaagaagagagtctaaaatatctctcttggatctctg 2808

                                                                        
Query: 312  ttagagcttcgcagatacagtcaaacagaattttcagatcatctatttgatcaccttgat 371
            |||| ||||| ||||| || ||||||| ||| |||| |||||||||| | || |||||||
Sbjct: 2807 ttagtgcttcacagatgcaatcaaacaaaatcttcatatcatctattcggtccccttgat 2748

             
Query: 372  t 372
            |
Sbjct: 2747 t 2747
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>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
             sequence
          Length = 158550

 Score =  256 bits (129), Expect = 5e-65
 Identities = 303/361 (83%)
 Strand = Plus / Plus

                                                                         
Query: 12    tctgatcagagtttcaaatccacaaatcgaaaacagcctcatcgataagttcgtctaaca 71
             ||||||||||  |||||||||||||||| ||||| |||||||| || | ||| |||||||
Sbjct: 20668 tctgatcagaacttcaaatccacaaatcaaaaaccgcctcatctatcaattcatctaaca 20727

                                                                         
Query: 72    caaactcccatatctccacaacgatcccttcagtcttcgaccgaatgtccatccatgtcc 131
             ||||||||||||||||||| || || ||||| ||||| || | |||||||||||||| | 
Sbjct: 20728 caaactcccatatctccacgacaattccttctgtctttgatctaatgtccatccatgcct 20787

                                                                         
Query: 132   gaacttccaaatcctttttgatcgtatgatctaatgtactcggaaaactatgtcggaggt 191
             |||| ||||||||| |||| ||  | || || |||||||| || ||||||     ||| |
Sbjct: 20788 gaacctccaaatcccttttaattatctgttccaatgtacttgggaaactacacttgagat 20847

                                                                         
Query: 192   aatcatcaacatatttgtcaacttctgcgacgaggtcttctccaattgggggtggcctta 251
             || |||||||||||||||||||||||| || ||| | |||||| |  || |||| || ||
Sbjct: 20848 aaccatcaacatatttgtcaacttctgagatgagtttttctcctaccggaggtgtccgta 20907

                                                                         
Query: 252   tgtcgtgtttgagaaacgataaccaagaagagagtctaaaatatctctcctggatctctg 311
             |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20908 tgtcatgtttgacaaaagataaccaagaagagagtctaaaatatctctcttggatctctg 20967

                                                                         
Query: 312   ttagagcttcgcagatacagtcaaacagaattttcagatcatctatttgatcaccttgat 371
             |||| ||||| ||||| || ||||||| ||| |||| |||||||||| | || |||||||
Sbjct: 20968 ttagtgcttcacagatgcaatcaaacaaaatcttcatatcatctattcggtccccttgat 21027

              
Query: 372   t 372
             |
Sbjct: 21028 t 21028
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  256 bits (129), Expect = 5e-65
 Identities = 303/361 (83%)
 Strand = Plus / Minus

                                                                            
Query: 12       tctgatcagagtttcaaatccacaaatcgaaaacagcctcatcgataagttcgtctaaca 71
                ||||||||||  |||||||||||||||| ||||| |||||||| || | ||| |||||||
Sbjct: 21043723 tctgatcagaacttcaaatccacaaatcaaaaaccgcctcatctatcaattcatctaaca 21043664

                                                                            
Query: 72       caaactcccatatctccacaacgatcccttcagtcttcgaccgaatgtccatccatgtcc 131
                ||||||||||||||||||| || || ||||| ||||| || | |||||||||||||| | 
Sbjct: 21043663 caaactcccatatctccacgacaattccttctgtctttgatctaatgtccatccatgcct 21043604

                                                                            
Query: 132      gaacttccaaatcctttttgatcgtatgatctaatgtactcggaaaactatgtcggaggt 191
                |||| ||||||||| |||| ||  | || || |||||||| || ||||||     ||| |
Sbjct: 21043603 gaacctccaaatcccttttaattatctgttccaatgtacttgggaaactacacttgagat 21043544

                                                                            
Query: 192      aatcatcaacatatttgtcaacttctgcgacgaggtcttctccaattgggggtggcctta 251
                || |||||||||||||||||||||||| || ||| | |||||| |  || |||| || ||
Sbjct: 21043543 aaccatcaacatatttgtcaacttctgagatgagtttttctcctaccggaggtgtccgta 21043484

                                                                            
Query: 252      tgtcgtgtttgagaaacgataaccaagaagagagtctaaaatatctctcctggatctctg 311
                |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21043483 tgtcatgtttgacaaaagataaccaagaagagagtctaaaatatctctcttggatctctg 21043424

                                                                            
Query: 312      ttagagcttcgcagatacagtcaaacagaattttcagatcatctatttgatcaccttgat 371
                |||| ||||| ||||| || ||||||| ||| |||| |||||||||| | || |||||||
Sbjct: 21043423 ttagtgcttcacagatgcaatcaaacaaaatcttcatatcatctattcggtccccttgat 21043364

                 
Query: 372      t 372
                |
Sbjct: 21043363 t 21043363
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>dbj|AK065729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035P21, full
            insert sequence
          Length = 3674

 Score =  256 bits (129), Expect = 5e-65
 Identities = 303/361 (83%)
 Strand = Plus / Minus

                                                                        
Query: 12   tctgatcagagtttcaaatccacaaatcgaaaacagcctcatcgataagttcgtctaaca 71
            ||||||||||  |||||||||||||||| ||||| |||||||| || | ||| |||||||
Sbjct: 3188 tctgatcagaacttcaaatccacaaatcaaaaaccgcctcatctatcaattcatctaaca 3129

                                                                        
Query: 72   caaactcccatatctccacaacgatcccttcagtcttcgaccgaatgtccatccatgtcc 131
            ||||||||||||||||||| || || ||||| ||||| || | |||||||||||||| | 
Sbjct: 3128 caaactcccatatctccacgacaattccttctgtctttgatctaatgtccatccatgcct 3069

                                                                        
Query: 132  gaacttccaaatcctttttgatcgtatgatctaatgtactcggaaaactatgtcggaggt 191
            |||| ||||||||| |||| ||  | || || |||||||| || ||||||     ||| |
Sbjct: 3068 gaacctccaaatcccttttaattatctgttccaatgtacttgggaaactacacttgagat 3009

                                                                        
Query: 192  aatcatcaacatatttgtcaacttctgcgacgaggtcttctccaattgggggtggcctta 251
            || |||||||||||||||||||||||| || ||| | |||||| |  || |||| || ||
Sbjct: 3008 aaccatcaacatatttgtcaacttctgagatgagtttttctcctaccggaggtgtccgta 2949

                                                                        
Query: 252  tgtcgtgtttgagaaacgataaccaagaagagagtctaaaatatctctcctggatctctg 311
            |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2948 tgtcatgtttgacaaaagataaccaagaagagagtctaaaatatctctcttggatctctg 2889

                                                                        
Query: 312  ttagagcttcgcagatacagtcaaacagaattttcagatcatctatttgatcaccttgat 371
            |||| ||||| ||||| || ||||||| ||| |||| |||||||||| | || |||||||
Sbjct: 2888 ttagtgcttcacagatgcaatcaaacaaaatcttcatatcatctattcggtccccttgat 2829

             
Query: 372  t 372
            |
Sbjct: 2828 t 2828
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  256 bits (129), Expect = 5e-65
 Identities = 303/361 (83%)
 Strand = Plus / Minus

                                                                            
Query: 12       tctgatcagagtttcaaatccacaaatcgaaaacagcctcatcgataagttcgtctaaca 71
                ||||||||||  |||||||||||||||| ||||| |||||||| || | ||| |||||||
Sbjct: 21054987 tctgatcagaacttcaaatccacaaatcaaaaaccgcctcatctatcaattcatctaaca 21054928

                                                                            
Query: 72       caaactcccatatctccacaacgatcccttcagtcttcgaccgaatgtccatccatgtcc 131
                ||||||||||||||||||| || || ||||| ||||| || | |||||||||||||| | 
Sbjct: 21054927 caaactcccatatctccacgacaattccttctgtctttgatctaatgtccatccatgcct 21054868

                                                                            
Query: 132      gaacttccaaatcctttttgatcgtatgatctaatgtactcggaaaactatgtcggaggt 191
                |||| ||||||||| |||| ||  | || || |||||||| || ||||||     ||| |
Sbjct: 21054867 gaacctccaaatcccttttaattatctgttccaatgtacttgggaaactacacttgagat 21054808

                                                                            
Query: 192      aatcatcaacatatttgtcaacttctgcgacgaggtcttctccaattgggggtggcctta 251
                || |||||||||||||||||||||||| || ||| | |||||| |  || |||| || ||
Sbjct: 21054807 aaccatcaacatatttgtcaacttctgagatgagtttttctcctaccggaggtgtccgta 21054748

                                                                            
Query: 252      tgtcgtgtttgagaaacgataaccaagaagagagtctaaaatatctctcctggatctctg 311
                |||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21054747 tgtcatgtttgacaaaagataaccaagaagagagtctaaaatatctctcttggatctctg 21054688

                                                                            
Query: 312      ttagagcttcgcagatacagtcaaacagaattttcagatcatctatttgatcaccttgat 371
                |||| ||||| ||||| || ||||||| ||| |||| |||||||||| | || |||||||
Sbjct: 21054687 ttagtgcttcacagatgcaatcaaacaaaatcttcatatcatctattcggtccccttgat 21054628

                 
Query: 372      t 372
                |
Sbjct: 21054627 t 21054627
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>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092G21, complete sequence
          Length = 151267

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   aattttcagatcatctatttg 360
             |||||||||||||||||||||
Sbjct: 69156 aattttcagatcatctatttg 69136
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>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    ctgatcagagtttcaaatcca 33
             |||||||||||||||||||||
Sbjct: 31969 ctgatcagagtttcaaatcca 31989
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>gb|AC123051.4| Mus musculus BAC clone RP24-366E4 from chromosome 6, complete sequence
          Length = 143909

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctgatcagagtttcaaatcca 33
              |||||||||||||||||||||
Sbjct: 116393 ctgatcagagtttcaaatcca 116373
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>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 155235

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 376   taggtcttccacagggcaggg 396
             |||||||||||||||||||||
Sbjct: 59057 taggtcttccacagggcaggg 59037
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 340      aattttcagatcatctatttg 360
                |||||||||||||||||||||
Sbjct: 19147258 aattttcagatcatctatttg 19147238
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>gb|AC161885.3| Gallus gallus BAC clone CH261-15B19 from chromosome ul, complete
             sequence
          Length = 195749

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    ctgatcagagtttcaaatcca 33
             |||||||||||||||||||||
Sbjct: 82020 ctgatcagagtttcaaatcca 82000
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>ref|XM_471647.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  acatatttgtcaacttctgc 219
            ||||||||||||||||||||
Sbjct: 1814 acatatttgtcaacttctgc 1795
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>gb|DQ158856.1| Bigelowiella natans nucleomorph chromosome 1, partial sequence
          Length = 140590

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ggaggtaatcatcaacatat 205
             ||||||||||||||||||||
Sbjct: 79036 ggaggtaatcatcaacatat 79017
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>emb|AL365179.30| Human DNA sequence from clone RP13-34C21 on chromosome Xq24-25 Contains
             a chromobox homolog 1 (HP1 beta homolog Drosophila) (CBX1)
             pseudogene and a CpG island, complete sequence
          Length = 180851

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   aagagagtctaaaatatctc 298
             ||||||||||||||||||||
Sbjct: 39886 aagagagtctaaaatatctc 39905
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>emb|AL935184.16| Zebrafish DNA sequence from clone DKEY-30K22 in linkage group 1, complete
              sequence
          Length = 255909

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    atctctcctggatctctgtt 313
              ||||||||||||||||||||
Sbjct: 130067 atctctcctggatctctgtt 130048
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>emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0068N06,
             complete sequence
          Length = 172895

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acatatttgtcaacttctgc 219
             ||||||||||||||||||||
Sbjct: 79408 acatatttgtcaacttctgc 79389
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>dbj|AB051418.1| Carabus insulicola DNA, microsatellite Cins26
          Length = 367

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 atacagtcaaacagaatttt 345
           ||||||||||||||||||||
Sbjct: 142 atacagtcaaacagaatttt 123
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>ref|XM_689716.1| PREDICTED: Danio rerio hypothetical protein LOC553239 (LOC553239),
            mRNA
          Length = 7164

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  atctctcctggatctctgtt 313
            ||||||||||||||||||||
Sbjct: 1820 atctctcctggatctctgtt 1801
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>emb|BX005365.16| Zebrafish DNA sequence from clone DKEY-237I1 in linkage group 1,
            complete sequence
          Length = 175252

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  atctctcctggatctctgtt 313
            ||||||||||||||||||||
Sbjct: 7387 atctctcctggatctctgtt 7368
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      acatatttgtcaacttctgc 219
                ||||||||||||||||||||
Sbjct: 12931149 acatatttgtcaacttctgc 12931130
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      acatatttgtcaacttctgc 219
                ||||||||||||||||||||
Sbjct: 18588032 acatatttgtcaacttctgc 18588013
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>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    aacttccaaatcctttttga 152
              ||||||||||||||||||||
Sbjct: 156244 aacttccaaatcctttttga 156263
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>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1756_G07
          Length = 149457

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acatatttgtcaacttctgc 219
             ||||||||||||||||||||
Sbjct: 15302 acatatttgtcaacttctgc 15283
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>gb|AC158166.2| Mus musculus BAC clone RP23-339K21 from chromosome 16, complete
             sequence
          Length = 194274

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aaccaagaagagagtctaaa 291
             ||||||||||||||||||||
Sbjct: 94344 aaccaagaagagagtctaaa 94325
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>gb|AC164566.3| Mus musculus BAC clone RP23-94P17 from chromosome 16, complete sequence
          Length = 203314

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    aaccaagaagagagtctaaa 291
              ||||||||||||||||||||
Sbjct: 164354 aaccaagaagagagtctaaa 164373
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>emb|AL844898.5| Mouse DNA sequence from clone RP23-346M17 on chromosome 2, complete
              sequence
          Length = 164288

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    atacagtcaaacagaatttt 345
              ||||||||||||||||||||
Sbjct: 108566 atacagtcaaacagaatttt 108547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,342,742
Number of Sequences: 3902068
Number of extensions: 3342742
Number of successful extensions: 58917
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58805
Number of HSP's gapped (non-prelim): 112
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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