ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.... 31 0.80
2APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 31 0.80
3ELT2_CAEEL (Q10655) Transcription factor elt-2 30 1.4
4TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor 30 1.8
5ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 pre... 30 1.8
6PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane ... 29 2.3
7Y9128_RHOBA (Q7UM18) UPF0314 protein RB9128 29 3.0
8BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 29 3.0
9TRMB_NITOC (Q3JCB2) tRNA (guanine-N(7)-)-methyltransferase (EC 2... 28 5.2
10ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: ... 28 5.2
11CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx3... 28 5.2
12ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(... 28 5.2
13ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: ... 28 6.8
14ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ... 24 7.2
15MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48)... 27 8.9
16MT_ARIAR (P55946) Metallothionein (MT) 27 8.9
17MTA1_SORMA (O42837) Mating type protein SmtA-1 27 8.9
18MRP_AQUAE (O66946) Protein mrp homolog 27 8.9
19PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic... 27 8.9
20NELL2_RAT (Q62918) Protein kinase C-binding protein NELL2 precur... 27 8.9

>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)|
           (Fragment)
          Length = 232

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 22/53 (41%), Positives = 26/53 (49%)
 Frame = -1

Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 107
           PP PSP+   PPP    P +  K    LSF +    RLQ L     IE L+GK
Sbjct: 166 PPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 209



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 268 RPPLPSPMIQDP-PPQSSQPLAD*KKIPALSFF 173
           +PP PSP    P PP  S P    K IPA+ FF
Sbjct: 97  KPPAPSPKPSPPKPPAPSPPKPQNKTIPAVFFF 129



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>ELT2_CAEEL (Q10655) Transcription factor elt-2|
          Length = 433

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 322 EGLICSSCRNTCCASGRATGEGSTQCNA 405
           +GL+CS+C  T     R   EG   CNA
Sbjct: 233 QGLVCSNCNGTNTTLWRRNAEGDPVCNA 260



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>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor|
          Length = 674

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 407 LALHCVDPSPVARPEAQQVLRQLEQIRP 324
           LA+ C  P    RP  ++V++QLE+ RP
Sbjct: 627 LAMGCCAPVTTVRPSMEEVVKQLEENRP 654



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>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC|
           2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene)
          Length = 1256

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 319 IEGLICSSCRNTCCASGRATGEGSTQC 399
           +EGL+C    N+ CA G   G G TQC
Sbjct: 507 LEGLVC----NSLCARGHCWGPGPTQC 529



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>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic|
           protein 2d) (PIP2d)
          Length = 286

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 241 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 116
           QDPPP+   PL D  ++   SF+R LI+   +    LY+  +
Sbjct: 18  QDPPPE---PLFDATELGKWSFYRALIAEFIATLLFLYVTIM 56



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>Y9128_RHOBA (Q7UM18) UPF0314 protein RB9128|
          Length = 201

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 108 REFWCPCHSFIPKFICIWQKHS 43
           R FWC C S++P    IW  H+
Sbjct: 44  RRFWCECGSWVPWSWDIWTAHN 65



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
            2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
            (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 407  LALHCVDPSPVARPEAQQVLRQLEQIRPS 321
            +AL CVD  P  RP   QV+  L ++R S
Sbjct: 1104 IALRCVDDFPSKRPNMLQVVASLRELRGS 1132



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>TRMB_NITOC (Q3JCB2) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)|
           (tRNA(m7G46)-methyltransferase)
          Length = 236

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 107 ESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLF 3
           ESF  R I SF+     GR TP  +K +   WP +
Sbjct: 12  ESFQPRPITSFVRR--EGRMTPAQKKALEHLWPRY 44



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>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 431

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 21/52 (40%), Positives = 24/52 (46%)
 Frame = -1

Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEG 110
           PP P P    PPP    P A  K   ALSF +    RLQ L     +E L+G
Sbjct: 360 PPPPPPPPPPPPPPPPPPPASTKPPQALSFAK----RLQQL-----VEVLKG 402



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>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast|
           precursor (EC 2.7.11.1)
          Length = 419

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 407 LALHCVDPSPVARPEAQQVLRQLEQIRPSIAVTATSS 297
           + L C++P P  RP  ++V+  LE I+    V   SS
Sbjct: 343 ITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVPNRSS 379



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>ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(2+)-ATPase)|
          Length = 1004

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 310 VTAIEGLICSSCRNTCCASGRATGEGSTQCNAS 408
           + A+ G+ CS+C NT     RA  +G T+C+ S
Sbjct: 5   ILAVHGMTCSACTNTINTQLRAL-KGVTKCDIS 36



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>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 421

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = -1

Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 107
           PP  SP+   PPP    P +  K    LSF +    RLQ L     IE L+GK
Sbjct: 355 PPPASPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 398



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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 24.3 bits (51), Expect(2) = 7.2
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 265  PPLPSPMIQDPPPQSSQP 212
            P LP P  Q PPPQ   P
Sbjct: 2487 PSLPQPPPQAPPPQCPLP 2504



 Score = 21.6 bits (44), Expect(2) = 7.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 371  RPEAQQVLRQLEQ 333
            +PE QQ L QLEQ
Sbjct: 2460 KPEMQQQLEQLEQ 2472



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>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Monocytic leukemia zinc finger protein) (Monocytic
            leukemia zinc finger homolog)
          Length = 1998

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 268  RPPLPSPMIQDPPPQSSQP 212
            +PP P P  Q PPP   QP
Sbjct: 1666 QPPPPQPQQQPPPPPQQQP 1684



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>MT_ARIAR (P55946) Metallothionein (MT)|
          Length = 66

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
 Frame = +1

Query: 322 EGLICSSCRNTCCASG------RATGEGSTQCNAS 408
           EG  C+SC+   C S         TG  S +CN+S
Sbjct: 28  EGCACASCKTCNCTSDGCKCGKECTGAASCKCNSS 62



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>MTA1_SORMA (O42837) Mating type protein SmtA-1|
          Length = 306

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -1

Query: 277 ILLRPPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLF 140
           + + PP P P+ Q P P S  P A  KK+     FR   S L S F
Sbjct: 27  LAMMPPGPGPVRQIPEPVSQAP-APKKKVNGFMGFRSYYSPLFSQF 71



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>MRP_AQUAE (O66946) Protein mrp homolog|
          Length = 364

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 241 QDPPPQSSQPLAD*KKIPAL 182
           Q PPPQ+ QP+   KK+P +
Sbjct: 92  QTPPPQTQQPMFTRKKVPGV 111



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>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)|
           (PIP2a)
          Length = 287

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 241 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 116
           QDPPP    P  D  ++   SF+R +I+   +    LYI  L
Sbjct: 19  QDPPPA---PFIDGAELKKWSFYRAVIAEFVATLLFLYITVL 57



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>NELL2_RAT (Q62918) Protein kinase C-binding protein NELL2 precursor (NEL-like|
           protein 2)
          Length = 816

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 319 IEGLICSSCRNTCCASGRA--TGEGSTQCNAS 408
           ++G  C  C++TC   GR+   GE ST  +AS
Sbjct: 322 VDGKCCKECKSTCQFQGRSYFEGERSTVFSAS 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,220,323
Number of Sequences: 219361
Number of extensions: 630805
Number of successful extensions: 3664
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3631
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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