Clone Name | rbastl33c04 |
---|---|
Clone Library Name | barley_pub |
>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)| (Fragment) Length = 232 Score = 30.8 bits (68), Expect = 0.80 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 107 PP PSP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 166 PPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 209
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -1 Query: 268 RPPLPSPMIQDP-PPQSSQPLAD*KKIPALSFF 173 +PP PSP P PP S P K IPA+ FF Sbjct: 97 KPPAPSPKPSPPKPPAPSPPKPQNKTIPAVFFF 129
>ELT2_CAEEL (Q10655) Transcription factor elt-2| Length = 433 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 322 EGLICSSCRNTCCASGRATGEGSTQCNA 405 +GL+CS+C T R EG CNA Sbjct: 233 QGLVCSNCNGTNTTLWRRNAEGDPVCNA 260
>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor| Length = 674 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -3 Query: 407 LALHCVDPSPVARPEAQQVLRQLEQIRP 324 LA+ C P RP ++V++QLE+ RP Sbjct: 627 LAMGCCAPVTTVRPSMEEVVKQLEENRP 654
>ERBB2_MOUSE (P70424) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1256 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +1 Query: 319 IEGLICSSCRNTCCASGRATGEGSTQC 399 +EGL+C N+ CA G G G TQC Sbjct: 507 LEGLVC----NSLCARGHCWGPGPTQC 529
>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic| protein 2d) (PIP2d) Length = 286 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 241 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 116 QDPPP+ PL D ++ SF+R LI+ + LY+ + Sbjct: 18 QDPPPE---PLFDATELGKWSFYRALIAEFIATLLFLYVTIM 56
>Y9128_RHOBA (Q7UM18) UPF0314 protein RB9128| Length = 201 Score = 28.9 bits (63), Expect = 3.0 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 108 REFWCPCHSFIPKFICIWQKHS 43 R FWC C S++P IW H+ Sbjct: 44 RRFWCECGSWVPWSWDIWTAHN 65
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -3 Query: 407 LALHCVDPSPVARPEAQQVLRQLEQIRPS 321 +AL CVD P RP QV+ L ++R S Sbjct: 1104 IALRCVDDFPSKRPNMLQVVASLRELRGS 1132
>TRMB_NITOC (Q3JCB2) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 236 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 107 ESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLF 3 ESF R I SF+ GR TP +K + WP + Sbjct: 12 ESFQPRPITSFVRR--EGRMTPAQKKALEHLWPRY 44
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/52 (40%), Positives = 24/52 (46%) Frame = -1 Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEG 110 PP P P PPP P A K ALSF + RLQ L +E L+G Sbjct: 360 PPPPPPPPPPPPPPPPPPPASTKPPQALSFAK----RLQQL-----VEVLKG 402
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 407 LALHCVDPSPVARPEAQQVLRQLEQIRPSIAVTATSS 297 + L C++P P RP ++V+ LE I+ V SS Sbjct: 343 ITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVPNRSS 379
>ATU2_YEAST (P38995) Copper-transporting ATPase (EC 3.6.3.4) (Cu(2+)-ATPase)| Length = 1004 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 310 VTAIEGLICSSCRNTCCASGRATGEGSTQCNAS 408 + A+ G+ CS+C NT RA +G T+C+ S Sbjct: 5 ILAVHGMTCSACTNTINTQLRAL-KGVTKCDIS 36
>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 421 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -1 Query: 265 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 107 PP SP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 355 PPPASPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 398
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 24.3 bits (51), Expect(2) = 7.2 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = -1 Query: 265 PPLPSPMIQDPPPQSSQP 212 P LP P Q PPPQ P Sbjct: 2487 PSLPQPPPQAPPPQCPLP 2504 Score = 21.6 bits (44), Expect(2) = 7.2 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -3 Query: 371 RPEAQQVLRQLEQ 333 +PE QQ L QLEQ Sbjct: 2460 KPEMQQQLEQLEQ 2472
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 Query: 268 RPPLPSPMIQDPPPQSSQP 212 +PP P P Q PPP QP Sbjct: 1666 QPPPPQPQQQPPPPPQQQP 1684
>MT_ARIAR (P55946) Metallothionein (MT)| Length = 66 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 6/35 (17%) Frame = +1 Query: 322 EGLICSSCRNTCCASG------RATGEGSTQCNAS 408 EG C+SC+ C S TG S +CN+S Sbjct: 28 EGCACASCKTCNCTSDGCKCGKECTGAASCKCNSS 62
>MTA1_SORMA (O42837) Mating type protein SmtA-1| Length = 306 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -1 Query: 277 ILLRPPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLF 140 + + PP P P+ Q P P S P A KK+ FR S L S F Sbjct: 27 LAMMPPGPGPVRQIPEPVSQAP-APKKKVNGFMGFRSYYSPLFSQF 71
>MRP_AQUAE (O66946) Protein mrp homolog| Length = 364 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 241 QDPPPQSSQPLAD*KKIPAL 182 Q PPPQ+ QP+ KK+P + Sbjct: 92 QTPPPQTQQPMFTRKKVPGV 111
>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)| (PIP2a) Length = 287 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 241 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 116 QDPPP P D ++ SF+R +I+ + LYI L Sbjct: 19 QDPPPA---PFIDGAELKKWSFYRAVIAEFVATLLFLYITVL 57
>NELL2_RAT (Q62918) Protein kinase C-binding protein NELL2 precursor (NEL-like| protein 2) Length = 816 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = +1 Query: 319 IEGLICSSCRNTCCASGRA--TGEGSTQCNAS 408 ++G C C++TC GR+ GE ST +AS Sbjct: 322 VDGKCCKECKSTCQFQGRSYFEGERSTVFSAS 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,220,323 Number of Sequences: 219361 Number of extensions: 630805 Number of successful extensions: 3664 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3631 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)