>emb|BX470133.27| Zebrafish DNA sequence from clone DKEY-169N7 in linkage group 9,
             complete sequence
          Length = 178929

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 79    tgttgcctaaaaaacagaaaatg 101
             |||||||||||||||||||||||
Sbjct: 72744 tgttgcctaaaaaacagaaaatg 72766

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Plus

                                                                      
Query: 40      aaaaagaatttacagaaagaatagct-tgcagtgcaattctgttgcctaaaaaac 93
               |||||||||||||| ||||||||||| ||  ||||| ||||||| ||||||||||
Sbjct: 7688129 aaaaagaatttaca-aaagaatagctctggggtgcacttctgttacctaaaaaac 7688182

>dbj|AK068944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170G22, full
            insert sequence
          Length = 4400

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Minus

                                                                   
Query: 40   aaaaagaatttacagaaagaatagct-tgcagtgcaattctgttgcctaaaaaac 93
            |||||||||||||| ||||||||||| ||  ||||| ||||||| ||||||||||
Sbjct: 4260 aaaaagaatttaca-aaagaatagctctggggtgcacttctgttacctaaaaaac 4207

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Plus

                                                                      
Query: 40      aaaaagaatttacagaaagaatagct-tgcagtgcaattctgttgcctaaaaaac 93
               |||||||||||||| ||||||||||| ||  ||||| ||||||| ||||||||||
Sbjct: 7688010 aaaaagaatttaca-aaagaatagctctggggtgcacttctgttacctaaaaaac 7688063

>emb|AL732646.5|CNS08C9L Oryza sativa chromosome 12, . BAC OSJNBb0001P17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151024

 Score = 46.1 bits (23), Expect = 0.042
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Plus

                                                                    
Query: 40    aaaaagaatttacagaaagaatagct-tgcagtgcaattctgttgcctaaaaaac 93
             |||||||||||||| ||||||||||| ||  ||||| ||||||| ||||||||||
Sbjct: 75522 aaaaagaatttaca-aaagaatagctctggggtgcacttctgttacctaaaaaac 75575

>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete
             sequence
          Length = 175796

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 86    taaaaaacagaaaatgcacta 106
             |||||||||||||||||||||
Sbjct: 50293 taaaaaacagaaaatgcacta 50273

>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete
              Sequence, complete sequence
          Length = 220143

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     taaaaaacagaaaatgcacta 106
              |||||||||||||||||||||
Sbjct: 179704 taaaaaacagaaaatgcacta 179724

>ref|NM_001017296.3| Xenopus tropicalis ring finger and FYVE like domain containing
           protein (rffl), mRNA
          Length = 4524

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  accacatgaaatttcacagag 37
           |||||||||||||||||||||
Sbjct: 144 accacatgaaatttcacagag 164

>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence
          Length = 165247

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    ggaaaaagaatttacagaaag 58
             |||||||||||||||||||||
Sbjct: 31597 ggaaaaagaatttacagaaag 31617

>emb|BX547939.11| Zebrafish DNA sequence from clone CH211-201M19 in linkage group 19,
             complete sequence
          Length = 215708

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    aattctgttgcctaaaaaaca 94
             |||||||||||||||||||||
Sbjct: 41474 aattctgttgcctaaaaaaca 41494

>emb|CR855622.2| Xenopus tropicalis finished cDNA, clone TGas006p10
          Length = 2083

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  accacatgaaatttcacagag 37
           |||||||||||||||||||||
Sbjct: 173 accacatgaaatttcacagag 193

>gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete sequence
          Length = 269739

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     aaaagaatttacagaaagaat 61
              |||||||||||||||||||||
Sbjct: 106651 aaaagaatttacagaaagaat 106671

>gb|BC090590.1| Xenopus tropicalis ring finger and FYVE like domain containing
           protein, mRNA (cDNA clone MGC:69470 IMAGE:5336090),
           complete cds
          Length = 4524

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 17  accacatgaaatttcacagag 37
           |||||||||||||||||||||
Sbjct: 144 accacatgaaatttcacagag 164

>emb|X85232.1|HSCH3ALU H.sapiens chromosome 3 sequences
          Length = 2868

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 34   agagggaaaaagaatttacag 54
            |||||||||||||||||||||
Sbjct: 2518 agagggaaaaagaatttacag 2538

>gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, complete sequence
          Length = 156357

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    tgcctaaaaaacagaaaatgcact 105
             |||||| |||||||||||||||||
Sbjct: 37308 tgcctacaaaacagaaaatgcact 37331

>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence
          Length = 180692

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaagaatagcttgcagtgca 74
              ||||||||||||||||||||
Sbjct: 129532 aaagaatagcttgcagtgca 129513

>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1,
             complete sequence
          Length = 208746

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gaccacatgaaatttcacag 35
             ||||||||||||||||||||
Sbjct: 15543 gaccacatgaaatttcacag 15524

>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete
            sequence
          Length = 223306

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   aaagaatagcttgcagtgca 74
            ||||||||||||||||||||
Sbjct: 7022 aaagaatagcttgcagtgca 7003

>emb|CR293531.11| Zebrafish DNA sequence from clone DKEY-125H23 in linkage group 21,
             complete sequence
          Length = 116173

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    tttcacagagggaaaaagaa 47
             ||||||||||||||||||||
Sbjct: 38681 tttcacagagggaaaaagaa 38700

>emb|CR692557.2|CNS0FXBT Tetraodon nigroviridis full-length cDNA
          Length = 1672

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   aaccgcagtggaccacatga 25
           ||||||||||||||||||||
Sbjct: 789 aaccgcagtggaccacatga 808

>emb|Z82217.1|HS78B3 Human DNA sequence from clone RP1-78B3 on chromosome 22, complete
             sequence
          Length = 73031

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ggaaaaagaatttacagaaa 57
             ||||||||||||||||||||
Sbjct: 31777 ggaaaaagaatttacagaaa 31758

>emb|AL161533.2|ATCHRIV33 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 33
          Length = 190026

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     aaaaagaatttacagaaaga 59
              ||||||||||||||||||||
Sbjct: 132373 aaaaagaatttacagaaaga 132392

>emb|AL080318.1|ATT4C9 Arabidopsis thaliana DNA chromosome 4, BAC clone T4C9 (ESSA project)
          Length = 85356

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   aaaaagaatttacagaaaga 59
            ||||||||||||||||||||
Sbjct: 9318 aaaaagaatttacagaaaga 9337

>gb|AC146695.39| Pan troglodytes clone rp43-48d2, complete sequence
          Length = 175208

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     ggaaaaagaatttacagaaa 57
              ||||||||||||||||||||
Sbjct: 164633 ggaaaaagaatttacagaaa 164614

>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence
          Length = 193989

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    cttgcagtgcaattctgttg 83
             ||||||||||||||||||||
Sbjct: 46403 cttgcagtgcaattctgttg 46384

>gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ve013, complete
             sequence
          Length = 106716

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    agtgcaattctgttgcctaa 88
             ||||||||||||||||||||
Sbjct: 62458 agtgcaattctgttgcctaa 62477

>gb|AC022033.10| Homo sapiens chromosome 8, clone RP11-214C21, complete sequence
          Length = 175298

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ttgcagtgcaattctgttgc 84
              ||||||||||||||||||||
Sbjct: 114841 ttgcagtgcaattctgttgc 114822

>gb|AF335470.1|AF335470 Mus musculus myosin light chain kinase (Mylk) gene, partial cds
          Length = 180102

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tttcacagagggaaaaagaa 47
             ||||||||||||||||||||
Sbjct: 19151 tttcacagagggaaaaagaa 19132

>gb|AC011005.7|AC011005 Homo sapiens chromosome 7 clone RP11-286H14, complete sequence
          Length = 217615

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     gaaaaagaatttacagaaag 58
              ||||||||||||||||||||
Sbjct: 158437 gaaaaagaatttacagaaag 158418

>gb|AC019195.10| Homo sapiens BAC clone RP11-355K7 from 2, complete sequence
          Length = 143823

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   cctaaaaaacagaaaatgca 103
            ||||||||||||||||||||
Sbjct: 4186 cctaaaaaacagaaaatgca 4167

>gb|AC083866.2|AC083866 Homo sapiens chromosome 7 clone RP11-702D16, complete sequence
          Length = 170528

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gaaaaagaatttacagaaag 58
             ||||||||||||||||||||
Sbjct: 81518 gaaaaagaatttacagaaag 81499

>gb|AC154813.2| Mus musculus BAC clone RP24-532J13 from 16, complete sequence
          Length = 175991

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tttcacagagggaaaaagaa 47
              ||||||||||||||||||||
Sbjct: 117018 tttcacagagggaaaaagaa 117037

>emb|CT030683.6| Mouse DNA sequence from clone RP23-22O8 on chromosome 9, complete
             sequence
          Length = 126280

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    aaaagaatttacagaaagaatagc 64
             ||||| ||||||||||||||||||
Sbjct: 72612 aaaagcatttacagaaagaatagc 72635

>gb|AC002109.1|AC002109 Genomic sequence from Mouse 9, complete sequence
          Length = 160048

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    aaaagaatttacagaaagaatagc 64
             ||||| ||||||||||||||||||
Sbjct: 81886 aaaagcatttacagaaagaatagc 81863

>dbj|AP001206.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1396H2
          Length = 162392

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttgcagtgcaattctgttgc 84
             ||||||||||||||||||||
Sbjct: 55547 ttgcagtgcaattctgttgc 55566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,486,282
Number of Sequences: 3902068
Number of extensions: 2486282
Number of successful extensions: 181113
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 180906
Number of HSP's gapped (non-prelim): 239
length of query: 205
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 183
effective length of database: 17,147,199,772
effective search space: 3137937558276
effective search space used: 3137937558276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)