>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)|
           (DEAD box protein 27)
          Length = 760

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 18  FENKAS*FARSITHSRQINLELSSSRSTEKNSLIEETSVSKQERIFYNSNTS**PFVK 191
           FE +     R  +H RQ  L   S+  T++   +   S+    RIF NSNT   PF++
Sbjct: 347 FEEQMKEIIRMCSHHRQTML--FSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLR 402

>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)|
           (DEAD box protein 27)
          Length = 796

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 18  FENKAS*FARSITHSRQINLELSSSRSTEKNSLIEETSVSKQERIFYNSNTS**PFVK 191
           FE +     R  +H RQ  L   S+  T++   +   S+    RIF NSNT   PF++
Sbjct: 381 FEEQMKEIIRMCSHHRQTML--FSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLR 436

>GCN5_SCHPO (Q9UUK2) Histone acetyltransferase gcn5 (EC 2.3.1.48)|
          Length = 454

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +3

Query: 69  INLELSSSRSTEKNSLIEETSVSKQERIFYNSNTS 173
           ++ ++SS R TEK S++EE S   Q R+  N +T+
Sbjct: 95  VDFDISSVRVTEKPSVLEEKSGVIQFRVVSNDDTA 129

>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 199  PMSSWFYC*DFCTPGCEKDPWYV 267
            P+S+  +C D C  GCE DP ++
Sbjct: 1574 PISTTQHCSDKCVEGCECDPGFI 1596

>NRAM_IAUDO (P03483) Neuraminidase (EC 3.2.1.18)|
          Length = 469

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 304 TSVVSSRLAGFL*RTTDLSHNRACRNPNS 218
           +S V S L G   R  D S N  CRNPN+
Sbjct: 314 SSYVCSGLVGDTPRNNDRSSNSYCRNPNN 342

>RRPL_UUK (P33453) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2103

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +3

Query: 9   HDTFENKAS*FARSITHSRQINLELSSSRSTEKNSLIE--ETSVSKQERIFYNSNTS 173
           +DTF++    F        ++ +E +++RS ++ SLI    T V K E   +N +T+
Sbjct: 102 NDTFDHWTPDFISQRLDGSKVVVEFTTNRSDQEQSLISAFNTKVGKYEVALHNRSTT 158

>PEL5_ARATH (Q9FXD8) Probable pectate lyase 5 precursor (EC 4.2.2.2)|
          Length = 408

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +2

Query: 71  QPRIVIQ*INRKKLANRRNIGI 136
           +P +V+Q +N K  A+RRN+G+
Sbjct: 32  EPELVVQEVNEKINASRRNLGV 53

>NRAM_IATOK (P06820) Neuraminidase (EC 3.2.1.18)|
          Length = 469

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 304 TSVVSSRLAGFL*RTTDLSHNRACRNPNS 218
           +S V S L G   R  D S N  CRNPN+
Sbjct: 314 SSYVCSGLVGDTPRNDDRSSNSNCRNPNN 342

>NRAM_IANT6 (P03473) Neuraminidase (EC 3.2.1.18)|
          Length = 469

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -1

Query: 304 TSVVSSRLAGFL*RTTDLSHNRACRNPNS 218
           +S V S L G   R  D S N  CRNPN+
Sbjct: 314 SSYVCSGLVGDTPRNDDRSSNSNCRNPNN 342

>COAT_CACV4 (O72120) Capsid protein precursor (Coat protein) (VP1)|
          Length = 691

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 128 IGIETGTNILQFKHVLV 178
           I  E GTN+LQF HVLV
Sbjct: 275 ISTEGGTNLLQFPHVLV 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,045,674
Number of Sequences: 219361
Number of extensions: 676486
Number of successful extensions: 1715
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)