ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CD59_AOTTR (P51447) CD59 glycoprotein precursor (Membrane attack... 30 2.3

>CD59_AOTTR (P51447) CD59 glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 128

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +2

Query: 8   QCTRNLNCDSSIDYPMLAGNTGQIKMFCKQYKKGALTKRV*RVNNQLSLGFMKF 169
           QCT   NC S++D  ++A    ++   C +++    +    RV+NQLS   +K+
Sbjct: 37  QCTMTTNCTSNLDSCLIAKAGSRVYYRCWKFEDCTFS----RVSNQLSENELKY 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,242,033
Number of Sequences: 219361
Number of extensions: 328409
Number of successful extensions: 650
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 80,573,946
effective HSP length: 34
effective length of database: 73,115,672
effective search space used: 1754776128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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