ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mR... 270 4e-69
2dbj|AK059433.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
4dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
5gb|BT024103.1| Zea mays clone EL01N0522A02 mRNA sequence 159 1e-35
6gb|BT016446.1| Zea mays clone Contig279 mRNA sequence 153 6e-34
7gb|AY109485.1| Zea mays CL580_1 mRNA sequence 151 2e-33
8dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge... 68 3e-08
9gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete se... 44 0.40
10ref|XM_626103.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 1.6
11ref|XM_214620.3| PREDICTED: Rattus norvegicus similar to Retinob... 42 1.6
12ref|XM_573473.1| PREDICTED: Rattus norvegicus similar to Rbbp8 p... 42 1.6
13emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone ... 42 1.6
14gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
15gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
16gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 6.3
17gb|BC077873.1| Xenopus laevis MGC80621 protein, mRNA (cDNA clone... 40 6.3
18gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 40 6.3
19gb|AE006598.1| Streptococcus pyogenes M1 GAS, section 127 of 167... 40 6.3
20gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 6.3
21gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 6.3
22gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 6.3
23gb|AC102676.16| Mus musculus chromosome 14, clone RP23-266L19, c... 40 6.3
24gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, compl... 40 6.3
25ref|XM_724397.1| Plasmodium yoelii yoelii str. 17XNL acetyl-CoA ... 40 6.3
26ref|XM_732501.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.3
27emb|CT009502.2| Human DNA sequence from clone DAMC-27I8 on chrom... 40 6.3
28gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 6.3
29emb|AL157786.13| Human DNA sequence from clone RP11-324O2 on chr... 40 6.3
30gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.3
31gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, com... 40 6.3
32emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) com... 40 6.3
33emb|BX511062.12| Zebrafish DNA sequence from clone CH211-266M11 ... 40 6.3
34gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, co... 40 6.3
35gb|AC087750.9| Homo sapiens chromosome 11, clone RP11-26I24, com... 40 6.3
36gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Canc... 40 6.3
37gb|AE010080.1| Streptococcus pyogenes strain MGAS8232, section 1... 40 6.3
38gb|AF067944.1| Caenorhabditis elegans cosmid K10C9, complete seq... 40 6.3
39dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
41gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 40 6.3
42gb|AC104563.14| Homo sapiens chromosome 11, clone RP11-587D21, c... 40 6.3
43gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, com... 40 6.3
44dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 40 6.3
45dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
46gb|AC113980.29| Mus musculus chromosome 5, clone RP24-63G23, com... 40 6.3
47dbj|AP002495.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.3
48gb|BC084924.1| Xenopus laevis hypothetical LOC495415, mRNA (cDNA... 40 6.3
49gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone ... 40 6.3
50emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chr... 40 6.3
51gb|AC144914.18| Mus musculus chromosome 5, clone RP24-210D14, co... 40 6.3
52emb|AL832906.1|HSM804217 Homo sapiens mRNA; cDNA DKFZp762A0914 (... 40 6.3 
>gb|AF040700.1|AF040700 Oryza sativa methionyl-tRNA synthetase mRNA, complete cds
          Length = 2850

 Score =  270 bits (136), Expect = 4e-69
 Identities = 242/276 (87%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                        
Query: 194  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
            |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 2458 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 2399

                                                                        
Query: 254  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
             || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 2398 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 2339

                                                                        
Query: 314  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
            |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 2338 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 2279

                                                                        
Query: 374  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 433
            |||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 2278 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacctttgtatg 2219

                                                
Query: 434  gtcctcatttgatgccgcca-aaccatagcatgtga 468
            ||||||||||||||| |||| |||||| ||||||||
Sbjct: 2218 gtcctcatttgatgcagccagaaccattgcatgtga 2183
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>dbj|AK059433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F07, full
           insert sequence
          Length = 376

 Score =  264 bits (133), Expect = 2e-67
 Identities = 239/273 (87%), Gaps = 1/273 (0%)
 Strand = Plus / Minus

                                                                       
Query: 194 ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
           |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 273 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 214

                                                                       
Query: 254 tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
            || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 213 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 154

                                                                       
Query: 314 ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
           |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 153 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 94

                                                                       
Query: 374 ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 433
           |||||||||||||||||| || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 93  ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacctttgtatg 34

                                            
Query: 434 gtcctcatttgatgccgcca-aaccatagcatg 465
           ||||||||||||||| |||| |||||| |||||
Sbjct: 33  gtcctcatttgatgcagccagaaccattgcatg 1
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  216 bits (109), Expect = 5e-53
 Identities = 202/233 (86%)
 Strand = Plus / Plus

                                                                            
Query: 194      ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
                |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 17927753 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 17927812

                                                                            
Query: 254      tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
                 || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 17927813 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 17927872

                                                                            
Query: 314      ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
                |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 17927873 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 17927932

                                                                     
Query: 374      ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacct 426
                |||||||||||||||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 17927933 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacct 17927985



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                               
Query: 423      acctttgtatggtcctcatttgatgccgcca-aaccatagcatgtga 468
                |||||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 17928075 acctttgtatggtcctcatttgatgcagccagaaccattgcatgtga 17928121
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>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0561B08
          Length = 161083

 Score =  216 bits (109), Expect = 5e-53
 Identities = 202/233 (86%)
 Strand = Plus / Plus

                                                                          
Query: 194    ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
              |||||||||  | ||| ||||||||| ||| |||||||| |||||||| |||||||||||
Sbjct: 132942 ctagcgaatttctccactcgctatcgacttcaccttgcaaactccagctgaagttgtgaa 133001

                                                                          
Query: 254    tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
               || ||||| ||||| |||||||| |||||||||||||||||||| || || |||| |||
Sbjct: 133002 gggtacatccttgtagcacgccacgagctcgccgttgctgtgcaggtcagctgatagctt 133061

                                                                          
Query: 314    ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
              |||||| || ||||| || ||||||||||| ||||| ||||| |||||  |||| |||||
Sbjct: 133062 ctcccacgtcttgctctttgcgttgagagacgcctcaggctctccagagtacccagcaaa 133121

                                                                   
Query: 374    ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacct 426
              |||||||||||||||||| || ||||||||||| |||||||||| ||||||||
Sbjct: 133122 ggtcaccctctccccaaccgctgcggattctggtggctcaaccagctcaacct 133174



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                             
Query: 423    acctttgtatggtcctcatttgatgccgcca-aaccatagcatgtga 468
              |||||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 133264 acctttgtatggtcctcatttgatgcagccagaaccattgcatgtga 133310
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>gb|BT024103.1| Zea mays clone EL01N0522A02 mRNA sequence
          Length = 1706

 Score =  159 bits (80), Expect = 1e-35
 Identities = 228/276 (82%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                        
Query: 194  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
            |||||||||| | || |||||||| ||||| ||| |||| ||||||||||| || |||||
Sbjct: 1396 ctagcgaatctctccgttcgctattgtcttcaccctgcagactccagccgaggtagtgaa 1337

                                                                        
Query: 254  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
             || |||||| |||| |||||||| ||||| |||||||||||||  ||||| |  | |||
Sbjct: 1336 gggcacatctctgtagcacgccaccagctcaccgttgctgtgcaactcggcggccagctt 1277

                                                                        
Query: 314  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
            |||||| || ||||| ||| |  |||| || |||||||||||||| |   |||| |||||
Sbjct: 1276 ctcccacgtcttgctcttgccactgagggaagcctcgggctcacccgcgtacccagcaaa 1217

                                                                        
Query: 374  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 433
            ||| || | |||||| |||||||| || |||||||| || |||||||||||||| || ||
Sbjct: 1216 ggtaacacgctcccccacagcagcagactctggaggttccaccaactcaaccttcgtgtg 1157

                                                
Query: 434  gtcctcatttgatgccgcca-aaccatagcatgtga 468
            ||||||||| ||||| |||| |||||| ||||||||
Sbjct: 1156 gtcctcattcgatgcagccagaaccattgcatgtga 1121
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>gb|BT016446.1| Zea mays clone Contig279 mRNA sequence
          Length = 1192

 Score =  153 bits (77), Expect = 6e-34
 Identities = 231/281 (82%), Gaps = 1/281 (0%)
 Strand = Plus / Minus

                                                                       
Query: 189 tgtgcctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagtt 248
           ||||||||||||||| | || || | ||| |||||||||||||| | ||||||||| |||
Sbjct: 978 tgtgcctagcgaatctctccgtttggtattgtcttgaccttgcagattccagccgaggtt 919

                                                                       
Query: 249 gtgaatggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagat 308
           ||||| || ||||||||||| |||||||| ||||| ||||| |||||||| ||||| |  
Sbjct: 918 gtgaagggcacatctttgtagcacgccacgagctcaccgttactgtgcagctcggcgggc 859

                                                                       
Query: 309 aacttctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccg 368
           | ||||||||| || ||||| ||| |  |||| || ||||| ||||| || ||  |||| 
Sbjct: 858 agcttctcccacgtcttgctcttgccactgagggaagcctcaggctcccccgagtaccca 799

                                                                       
Query: 369 gcaaaggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaaccttt 428
           |||||||| || | ||| || || ||||| ||||| || ||||| |||||||||||||| 
Sbjct: 798 gcaaaggtaacacgctcgcccacggcagcagattcgggtggctccaccaactcaaccttc 739

                                                    
Query: 429 gtatggtcctcatttgatgccgcc-aaaccatagcatgtga 468
           || ||||||||||| ||||| ||| ||||||| ||||||||
Sbjct: 738 gtgtggtcctcattcgatgcagccaaaaccattgcatgtga 698
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>gb|AY109485.1| Zea mays CL580_1 mRNA sequence
          Length = 2647

 Score =  151 bits (76), Expect = 2e-33
 Identities = 227/276 (82%), Gaps = 1/276 (0%)
 Strand = Plus / Minus

                                                                        
Query: 194  ctagcgaatcgccccattcgctatcgtcttgaccttgcatactccagccgaagttgtgaa 253
            |||||||||| | || |||||||| ||||| ||| |||| ||||||||||| || |||||
Sbjct: 2355 ctagcgaatctctccgttcgctattgtcttcaccctgcagactccagccgaggtagtgaa 2296

                                                                        
Query: 254  tggaacatctttgtaacacgccactagctcgccgttgctgtgcagatcggcagataactt 313
             || |||||| |||| |||||||| ||||| |||||||||||||  ||||| |  | |||
Sbjct: 2295 gggcacatctctgtagcacgccaccagctcaccgttgctgtgcaactcggcggccagctt 2236

                                                                        
Query: 314  ctcccaggttttgcttttggcgttgagagaggcctcgggctcaccagaaaacccggcaaa 373
            |||||| || ||||| ||| |  |||| || |||||||||||||| |   |||| |||||
Sbjct: 2235 ctcccacgtcttgctcttgccactgagggaagcctcgggctcacccgcgtacccagcaaa 2176

                                                                        
Query: 374  ggtcaccctctccccaacagcagcggattctggaggctcaaccaactcaacctttgtatg 433
            ||| || | ||| || |||||||| || |||||||| || |||||||||||||| || ||
Sbjct: 2175 ggtaacacgctcgcccacagcagcagactctggaggttccaccaactcaaccttcgtgtg 2116

                                                
Query: 434  gtcctcatttgatgccgcca-aaccatagcatgtga 468
            ||||||||| ||||| |||| |||||| ||||||||
Sbjct: 2115 gtcctcattcgatgcagccagaaccattgcatgtga 2080
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>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 1     gaacaaagcctgtaaagccaaccttccctgactgggaaaatgcaccatccggcg 54
             |||| |||||||| ||||||||||||||| |||| ||||||||| |||||||||
Sbjct: 87199 gaacgaagcctgtcaagccaaccttccctcactgcgaaaatgcaacatccggcg 87252



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 56    cacccacttaaacatctcatgagaagaccaatgattacatgaagattg 103
             |||||||||||| ||||||||| |||||||||| ||||| ||||||||
Sbjct: 21268 cacccacttaaatatctcatgacaagaccaatgcttacaggaagattg 21221
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>gb|AC148360.10| Medicago truncatula clone mth2-27i5, complete sequence
          Length = 113746

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 99    gattgtcaaaattttcaaaaaa 120
             ||||||||||||||||||||||
Sbjct: 48770 gattgtcaaaattttcaaaaaa 48791



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 99    gattgtcaaaattttcaaaaaa 120
             ||||||||||||||||||||||
Sbjct: 20542 gattgtcaaaattttcaaaaaa 20563
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>ref|XM_626103.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_1560),
           partial mRNA
          Length = 684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 101 ttgtcaaaattttcaaaaaac 121
           |||||||||||||||||||||
Sbjct: 296 ttgtcaaaattttcaaaaaac 316
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>ref|XM_214620.3| PREDICTED: Rattus norvegicus similar to Retinoblastoma-binding
            protein 8 (RBBP-8) (CtBP interacting protein) (CtIP)
            (Retinoblastoma-interacting protein and myosin-like)
            (RIM) (predicted) (LOC291787), mRNA
          Length = 2840

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 302  ggcagataacttctcccaggt 322
            |||||||||||||||||||||
Sbjct: 2236 ggcagataacttctcccaggt 2256
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>ref|XM_573473.1| PREDICTED: Rattus norvegicus similar to Rbbp8 protein (LOC498249),
           mRNA
          Length = 776

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 302 ggcagataacttctcccaggt 322
           |||||||||||||||||||||
Sbjct: 111 ggcagataacttctcccaggt 131
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>emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone b1dcf1.3.c08
          Length = 38167

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  aattttcaaaaaacagagtaa 128
            |||||||||||||||||||||
Sbjct: 6729 aattttcaaaaaacagagtaa 6709
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>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06,
              complete sequence
          Length = 151656

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     acatctcatgagaagaccaa 86
              ||||||||||||||||||||
Sbjct: 102049 acatctcatgagaagaccaa 102068
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>gb|AC144741.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0086E02, complete sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aaaattttcaaaaaacagag 125
             ||||||||||||||||||||
Sbjct: 92878 aaaattttcaaaaaacagag 92897
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>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1344878 attttaaaaaaacagagtaaatca 1344901
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>gb|BC077873.1| Xenopus laevis MGC80621 protein, mRNA (cDNA clone MGC:80621
           IMAGE:5506197), complete cds
          Length = 3360

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 ttgctgtgcagatcggcaga 307
           ||||||||||||||||||||
Sbjct: 254 ttgctgtgcagatcggcaga 235
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>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1417006 attttaaaaaaacagagtaaatca 1417029
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>gb|AE006598.1| Streptococcus pyogenes M1 GAS, section 127 of 167 of the complete
           genome
          Length = 10335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 attttcaaaaaacagagtaaatca 132
           ||||| ||||||||||||||||||
Sbjct: 74  attttaaaaaaacagagtaaatca 97
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1421990 attttaaaaaaacagagtaaatca 1422013
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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1363322 attttaaaaaaacagagtaaatca 1363345
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>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1339481 attttaaaaaaacagagtaaatca 1339504
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>gb|AC102676.16| Mus musculus chromosome 14, clone RP23-266L19, complete sequence
          Length = 190298

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 134   taattaacttccaatgaaatcaga 157
             |||||||||| |||||||||||||
Sbjct: 32635 taattaactttcaatgaaatcaga 32612
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>gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, complete sequence
          Length = 245784

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   ttgtcaaaattttcaaaaaa 120
             ||||||||||||||||||||
Sbjct: 39828 ttgtcaaaattttcaaaaaa 39809
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>ref|XM_724397.1| Plasmodium yoelii yoelii str. 17XNL acetyl-CoA carboxylase 1
            precursor (PY01695) partial mRNA
          Length = 8736

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  attgtcaaaattttcaaaaa 119
            ||||||||||||||||||||
Sbjct: 6675 attgtcaaaattttcaaaaa 6656
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>ref|XM_732501.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403601.00.0)
           partial mRNA
          Length = 1006

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 aaattttcaaaaaacagagt 126
           ||||||||||||||||||||
Sbjct: 613 aaattttcaaaaaacagagt 632
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>emb|CT009502.2| Human DNA sequence from clone DAMC-27I8 on chromosome 6, complete
             sequence
          Length = 35167

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    gaagattgtcaaaattttcaaaaa 119
             |||||||||||||||||| |||||
Sbjct: 15339 gaagattgtcaaaattttaaaaaa 15362
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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1414535 attttaaaaaaacagagtaaatca 1414558
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>emb|AL157786.13| Human DNA sequence from clone RP11-324O2 on chromosome 10 Contains a
              guanylate cyclase type protein pseudogene, the 5' end of
              the FACL5 for long-chain 5 fatty-acid-Coenzyme A ligase, a
              novel gene, the 3' end of a novel gene and a CpG island,
              complete sequence
          Length = 122591

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    tgaatggaacatctttgtaa 269
              ||||||||||||||||||||
Sbjct: 119134 tgaatggaacatctttgtaa 119153
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 43      caccatccggcggcacccacttaa 66
               ||||||| ||||||||||||||||
Sbjct: 1794326 caccatctggcggcacccacttaa 1794303
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>gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, complete sequence
          Length = 139773

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ttgtcaaaattttcaaaaaa 120
             ||||||||||||||||||||
Sbjct: 38543 ttgtcaaaattttcaaaaaa 38562
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>emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3
          Length = 321250

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     gattgtcaaaattttcaaaa 118
              ||||||||||||||||||||
Sbjct: 237770 gattgtcaaaattttcaaaa 237751
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>emb|BX511062.12| Zebrafish DNA sequence from clone CH211-266M11 in linkage group 17,
              complete sequence
          Length = 131970

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    aaaaaacagagtaaatcagt 134
              ||||||||||||||||||||
Sbjct: 123432 aaaaaacagagtaaatcagt 123451
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>gb|AC022018.10| Homo sapiens chromosome 10 clone RP11-214N15, complete sequence
          Length = 159617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   tgaatggaacatctttgtaa 269
             ||||||||||||||||||||
Sbjct: 14911 tgaatggaacatctttgtaa 14930
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>gb|AC087750.9| Homo sapiens chromosome 11, clone RP11-26I24, complete sequence
          Length = 49705

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    agattgtcaaaattttcaaa 117
             ||||||||||||||||||||
Sbjct: 42977 agattgtcaaaattttcaaa 42958
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>gb|AC069529.22| Homo sapiens 3 BAC RP11-332I3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 173202

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   cagataacttctcccaggtt 323
             ||||||||||||||||||||
Sbjct: 29527 cagataacttctcccaggtt 29508
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>gb|AE010080.1| Streptococcus pyogenes strain MGAS8232, section 128 of 173 of the
           complete genome
          Length = 10336

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 109 attttcaaaaaacagagtaaatca 132
           ||||| ||||||||||||||||||
Sbjct: 74  attttaaaaaaacagagtaaatca 97
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>gb|AF067944.1| Caenorhabditis elegans cosmid K10C9, complete sequence
          Length = 34348

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  attgtcaaaattttcaaaaa 119
            ||||||||||||||||||||
Sbjct: 7841 attgtcaaaattttcaaaaa 7860
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 111     tttcaaaaaacagagtaaat 130
               ||||||||||||||||||||
Sbjct: 3297089 tttcaaaaaacagagtaaat 3297108
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      acatctcatgagaagaccaa 86
               ||||||||||||||||||||
Sbjct: 6154480 acatctcatgagaagaccaa 6154499



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     aaaattttcaaaaaacagag 125
               ||||||||||||||||||||
Sbjct: 4015013 aaaattttcaaaaaacagag 4015032
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>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 109     attttcaaaaaacagagtaaatca 132
               ||||| ||||||||||||||||||
Sbjct: 1453408 attttaaaaaaacagagtaaatca 1453431
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>gb|AC104563.14| Homo sapiens chromosome 11, clone RP11-587D21, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    agattgtcaaaattttcaaa 117
             ||||||||||||||||||||
Sbjct: 31833 agattgtcaaaattttcaaa 31814
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>gb|AC125005.15| Mus musculus chromosome 5, clone RP23-370D2, complete sequence
          Length = 176900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  cccacttaaacatctcatga 77
           ||||||||||||||||||||
Sbjct: 382 cccacttaaacatctcatga 401
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>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    attttcaaaaaacagagtaaatca 132
              ||||| ||||||||||||||||||
Sbjct: 443462 attttaaaaaaacagagtaaatca 443439
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0438H08
          Length = 148626

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tttcaaaaaacagagtaaat 130
             ||||||||||||||||||||
Sbjct: 74656 tttcaaaaaacagagtaaat 74675
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>gb|AC113980.29| Mus musculus chromosome 5, clone RP24-63G23, complete sequence
          Length = 193657

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cccacttaaacatctcatga 77
              ||||||||||||||||||||
Sbjct: 140817 cccacttaaacatctcatga 140836



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cccacttaaacatctcatga 77
             ||||||||||||||||||||
Sbjct: 93539 cccacttaaacatctcatga 93558
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>dbj|AP002495.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2313N18, complete
             sequence
          Length = 131570

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    actgggaaaatgcaccatcc 50
             ||||||||||||||||||||
Sbjct: 68480 actgggaaaatgcaccatcc 68499
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>gb|BC084924.1| Xenopus laevis hypothetical LOC495415, mRNA (cDNA clone MGC:80888
            IMAGE:5515338), complete cds
          Length = 4335

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  ttgctgtgcagatcggcaga 307
            ||||||||||||||||||||
Sbjct: 1029 ttgctgtgcagatcggcaga 1010
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>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete
              sequence
          Length = 202336

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gattctggaggctcaaccaa 418
              ||||||||||||||||||||
Sbjct: 106243 gattctggaggctcaaccaa 106224
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>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete
              sequence
          Length = 187537

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 399    gattctggaggctcaaccaa 418
              ||||||||||||||||||||
Sbjct: 170530 gattctggaggctcaaccaa 170511
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>gb|AC144914.18| Mus musculus chromosome 5, clone RP24-210D14, complete sequence
          Length = 159643

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cccacttaaacatctcatga 77
              ||||||||||||||||||||
Sbjct: 131172 cccacttaaacatctcatga 131191
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>emb|AL832906.1|HSM804217 Homo sapiens mRNA; cDNA DKFZp762A0914 (from clone DKFZp762A0914)
          Length = 2722

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  caccatccggcggcacccac 62
           ||||||||||||||||||||
Sbjct: 720 caccatccggcggcacccac 701


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,284,734
Number of Sequences: 3902068
Number of extensions: 4284734
Number of successful extensions: 85232
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84887
Number of HSP's gapped (non-prelim): 345
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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