ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl33b07 |
|---|---|
| Clone Library Name | barley_pub |
>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) (Hv-MMT1) Length = 1088 Score = 115 bits (287), Expect = 4e-26 Identities = 53/58 (91%), Positives = 57/58 (98%) Frame = -1 Query: 322 NMREALLRSPGLCINNNGWTGVPDYCRFSFALENGDFDRAMECIARFRELVLGGGAKV 149 NMREALLRS GLCI+++GWTGVPDYCRFSFALE+GDFDRAMECIARFRELVLGGGAKV Sbjct: 1027 NMREALLRSTGLCISSSGWTGVPDYCRFSFALESGDFDRAMECIARFRELVLGGGAKV 1084
>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1091 Score = 93.6 bits (231), Expect = 1e-19 Identities = 40/54 (74%), Positives = 49/54 (90%) Frame = -1 Query: 322 NMREALLRSPGLCINNNGWTGVPDYCRFSFALENGDFDRAMECIARFRELVLGG 161 N+REA+LR+ GLCIN++ WTG+P YCRFSFALE G+F+RAM CIARF+ELVLGG Sbjct: 1032 NIREAILRATGLCINSSSWTGIPGYCRFSFALERGEFERAMGCIARFKELVLGG 1085
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 86.7 bits (213), Expect = 1e-17 Identities = 35/51 (68%), Positives = 45/51 (88%) Frame = -1 Query: 322 NMREALLRSPGLCINNNGWTGVPDYCRFSFALENGDFDRAMECIARFRELV 170 N+REA+LR+ GLCIN WTG+PDYCRF+FALE+GDFDRA++CI +F +LV Sbjct: 1037 NIREAMLRATGLCINGPSWTGIPDYCRFTFALEDGDFDRALDCIVKFNQLV 1087
>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1071 Score = 70.1 bits (170), Expect = 1e-12 Identities = 27/51 (52%), Positives = 40/51 (78%) Frame = -1 Query: 322 NMREALLRSPGLCINNNGWTGVPDYCRFSFALENGDFDRAMECIARFRELV 170 NMR+ L G+C+N+ WTG+P YCRFSFALE+ +FD+A+E IA+F+ ++ Sbjct: 1019 NMRDVFLSHTGVCLNSGSWTGIPGYCRFSFALEDSEFDKAIESIAQFKSVL 1069
>GMEB1_HUMAN (Q9Y692) Glucocorticoid modulatory element-binding protein 1| (GMEB-1) (Parvovirus initiation factor p96) (PIF p96) (DNA-binding protein p96PIF) Length = 573 Score = 33.9 bits (76), Expect = 0.11 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = +2 Query: 65 KKIRVGSPSGFTVFSPT*PTQQPLVATIHLSTATKDQLPESGDALHGPVEVAVLQSKAEA 244 K+ R+ P+ TV SP+ P QQP I T T PV + Sbjct: 378 KRPRLQRPASTTVLSPSPPVQQPQFTVISPITIT-------------PVGQSFSMGNIPV 424 Query: 245 AVVRHPCPPVVVNAQPGGPQ 304 A + PV V+ P GPQ Sbjct: 425 ATLSQGSSPVTVHTLPSGPQ 444
>LCMT1_ASPFU (Q4WS57) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein| phosphatase methyltransferase 1) Length = 398 Score = 32.7 bits (73), Expect = 0.23 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Frame = +2 Query: 134 LVATIHLSTATKDQLPESGDALHG------PVEVAVLQSKAEAAVVRHPCPP-VVVNAQP 292 L T+ L +A +P+SGDALH PV++ L + A R P P QP Sbjct: 169 LQRTLGLGSAQNVAIPDSGDALHSPTYHLHPVDLRTLAASGSATTSRSPSSPNPAEKDQP 228 Query: 293 GGPQEG 310 P +G Sbjct: 229 PCPLQG 234
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = +2 Query: 110 PT*PTQQPLVATIHLSTATKDQLPESGDALHGPVEVAVLQSKAEAAVVRHPCPPVVVNAQ 289 P P P V T ++TAT +P D+ P + + A P P+V N Sbjct: 350 PAPPPTTPTVTTPTVATATTAGIPHIPDSAPTPSPAPIAPPTTDNASAMTPIAPMVANGP 409 Query: 290 PGGP 301 P P Sbjct: 410 PASP 413
>KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)| Length = 1826 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +2 Query: 152 LSTAT-KDQLPESGDALHGPVEVAVLQSKAEAAVVRHPCPPVVVNA-QPGGPQE 307 +STAT D L DA P + A + HP PP V A +P GPQ+ Sbjct: 1573 VSTATLSDALGPGLDAAAPPGSMPTAPEAEPEAPISHPPPPTAVPAEEPPGPQQ 1626
>TAF2_YEAST (P23255) Transcription initiation factor TFIID subunit 2| (TBP-associated factor 2) (TBP-associated factor 150 kDa) (TAFII-150) (TSM-1) Length = 1407 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 Query: 256 PDYCRFSFALENGDFDRAMECIARFRELVLGGGAK 152 PDY S ++GD + +E I + ++V+ GG K Sbjct: 860 PDYMFSSQLRQDGDIEAQLEAIRYYEDVVVNGGVK 894
>GPR27_HUMAN (Q9NS67) Probable G-protein coupled receptor 27 (Super conserved| receptor expressed in brain 1) Length = 375 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +2 Query: 200 HGPVEVAVLQSKAEAAVVRHPCPPVVVNAQPGGPQEG 310 HGP + A R P PP +V +P GP G Sbjct: 230 HGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRG 266
>GPR27_MOUSE (O54897) Probable G-protein coupled receptor 27 (Super conserved| receptor expressed in brain 1) Length = 379 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +2 Query: 200 HGPVEVAVLQSKAEAAVVRHPCPPVVVNAQPGGPQEG 310 HGP + A R P PP +V +P GP G Sbjct: 234 HGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRG 270
>GPR27_RAT (Q9JJH3) Probable G-protein coupled receptor 27 (Super conserved| receptor expressed in brain 1) Length = 377 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +2 Query: 200 HGPVEVAVLQSKAEAAVVRHPCPPVVVNAQPGGPQEG 310 HGP + A R P PP +V +P GP G Sbjct: 232 HGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRG 268
>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21| Length = 1447 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 179 PESGDALHGPVEVAVLQSKAE----AAVVRHPCPPVVVNAQPGGPQEGFP 316 P+ +GP ++ AE A + HP P +V +++ EGFP Sbjct: 636 PKDSPCKNGPQSATMVSPPAELGNDAMEISHPTPDLVPSSEEDSVSEGFP 685
>COBB_BRUSU (Q8G020) Cobyrinic acid A,C-diamide synthase| Length = 436 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 254 GLLPLQLCFGERRLRPGHGVHRPIQGAGPW 165 GLLPL+ F R+L G+ + P+ G PW Sbjct: 349 GLLPLETSFARRKLHLGYRLLEPLGGL-PW 377
>COBB_BRUME (Q8YHU1) Cobyrinic acid A,C-diamide synthase| Length = 436 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 254 GLLPLQLCFGERRLRPGHGVHRPIQGAGPW 165 GLLPL+ F R+L G+ + P+ G PW Sbjct: 349 GLLPLETSFARRKLHLGYRLLEPLGGL-PW 377
>WDR6_HUMAN (Q9NNW5) WD-repeat protein 6| Length = 1121 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -2 Query: 267 GQGCRTTAASALLWRTATSTGPWSASPDSGSWSLVAV 157 G+G R SAL +++ + G A +GSW L+AV Sbjct: 329 GRGYRGLGVSALCFKSRSRPGTLKAVTLAGSWRLLAV 365
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +1 Query: 112 HLTHPTTPSCYHSP*HRHQGPAP*IGRCTPWPGRSRRSPKQS*SGSSPAPLS 267 H HP P + P P G P +R P SGS+PAP S Sbjct: 120 HHHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSS 171
>ALG10_KLULA (Q6CN27) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4.1.-)| (Alpha-2-glucosyltransferase ALG10) (Dolichyl-phosphoglucose-dependent glucosyltransferase ALG10) (Asparagine-linked glycosylation protein 10) Length = 533 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +3 Query: 12 FNAFIPFLIRNKVVQTGKKR*ELVPLQVLQFFH 110 F F+ FL+ N+ + G K + L ++QFF+ Sbjct: 285 FGLFLAFLLYNRSITLGDKSNHVAGLHIVQFFY 317
>TAT_HV2SB (P12453) TAT protein (Transactivating regulatory protein)| Length = 130 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%) Frame = +1 Query: 184 IGRCTPWPGRSRRSPKQS*SGSSPA---PLSTR 273 +G C GR RRSPK++ + SSPA +STR Sbjct: 72 LGICYDRKGRRRRSPKKTKAHSSPASDKSISTR 104
>PEP3_SCHPO (O74925) Vacuolar membrane protein pep3 (Vacuolar protein sorting| 18) Length = 900 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = -1 Query: 229 LENGDFDRAMEC--IARFRELVLGGGAK 152 LE GDF++A+EC A+ R VL G A+ Sbjct: 384 LEKGDFEKALECANTAKVRNTVLVGYAE 411
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -2 Query: 279 TTTGGQGCRTTAASALLWRTATSTGPWSASPDSGSWSL 166 TTT +GC+ T++++ + + T T P S+ P S S+ Sbjct: 822 TTTDAEGCKKTSSTSKI--STTPTSPTSSKPTPTSTSM 857
>HYSA_PROAC (Q59634) Hyaluronate lyase precursor (EC 4.2.2.1) (Hyaluronidase)| (HYase) Length = 813 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = -2 Query: 228 WRTATSTGPWSASPDSGSWSLVA 160 W T T WS SGSWS A Sbjct: 503 WAAKTPTNEWSGGLASGSWSAAA 525
>TYRP1_AMBME (P55027) 5,6-dihydroxyindole-2-carboxylic acid oxidase precursor| (EC 1.14.18.-) (DHICA oxidase) (Tyrosinase-related protein 1) (TRP-1) (TRP1) Length = 534 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 242 AAVVRHPCPPVVVNAQPGGPQEGFPH 319 A+V R C P+ V+A+P GPQ +PH Sbjct: 58 ASVGRGRCAPLQVDARPHGPQ--YPH 81
>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1) (P125Nap1)| (NAP of plants) Length = 1359 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 10/50 (20%) Frame = -1 Query: 280 NNNGWTGVPDYCRFSFA----------LENGDFDRAMECIARFRELVLGG 161 N+N WT +P C A + G F + C+AR V+GG Sbjct: 1087 NDNSWTLLPYLCAAFMASNMWSTTAYDVNTGGFSNNLHCLARCVSAVVGG 1136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,426,259 Number of Sequences: 219361 Number of extensions: 1018122 Number of successful extensions: 3148 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 3004 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3146 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
