>dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine:
            L-methionine S-methyltransferase, complete cds
          Length = 3543

 Score =  533 bits (269), Expect = e-148
 Identities = 307/322 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 3423

                                                                        
Query: 61   gcnnnnnnngataagagttggttccccttcaggttttacagttttttcacccacttgacc 120
            ||       ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3422 gcaaagaaagataagagttggttccccttcaggttttacagtttcttcacccacttgacc 3363

                                                                        
Query: 121  cacccaacaacccctagttgctaccattcaccttagcaccgccaccaaggaccagctccc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 cacccaacaacccctagttgctaccattcaccttagcaccgccaccaaggaccagctccc 3303

                                                                        
Query: 181  tgaatcgggcgatgcactccatggcccggtcgaagtcgccgttctccaaagcaaagctga 240
            |||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 3302 tgaaccgggcgatgcactccatggcccggtcgaagtcgccgctctccagagcaaagctga 3243

                                                                        
Query: 241  agcggcagtagtccggcacccctgtccacccgttgttgttaatgcacagcccgggggacc 300
            |||||||||||||||||||||||||||||||| || || ||||||||||||||| |||||
Sbjct: 3242 agcggcagtagtccggcacccctgtccacccgctgctgctaatgcacagcccggtggacc 3183

                                  
Query: 301  tcaggagggcttccctcatgtt 322
            ||||||||||||||||||||||
Sbjct: 3182 tcaggagggcttccctcatgtt 3161

>gb|AF144079.1|AF144079 Zea mays S-adenosyl-L-methionine:L-methionine S-methyltransferase
            mRNA, complete cds
          Length = 3527

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 223  tctccaaagcaaagctgaagcggcagtagtccggcacccctgtccacccgttgttgttaa 282
            |||||| |||||||||||| ||||||||| | || | ||| |||||   | || |||| |
Sbjct: 3196 tctccagagcaaagctgaaccggcagtagccagggatccccgtccaggagctgctgttta 3137

                                             
Query: 283  tgcacagcccgggggacctcaggagggcttccc 315
            |||||||||| | || |||||||| ||||||||
Sbjct: 3136 tgcacagcccagtggccctcaggatggcttccc 3104

>gb|AY109558.1| Zea mays CL1511_1 mRNA sequence
          Length = 3458

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 223  tctccaaagcaaagctgaagcggcagtagtccggcacccctgtccacccgttgttgttaa 282
            |||||| |||||||||||| ||||||||| | || | ||| |||||   | || |||| |
Sbjct: 3196 tctccagagcaaagctgaaccggcagtagccagggatccccgtccaggagctgctgttta 3137

                                             
Query: 283  tgcacagcccgggggacctcaggagggcttccc 315
            |||||||||| | || |||||||| ||||||||
Sbjct: 3136 tgcacagcccagtggccctcaggatggcttccc 3104

>ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G01520 transcript variant
           AT5G01520.1 mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837

>ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion binding AT5G01520
           transcript variant AT5G01520.2 mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837

>gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N21, complete sequence
          Length = 80752

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 42201 attcaacgtttttattcctttttt 42224

>gb|AC159413.1| Trypanosoma brucei chromosome 7 clone RPCI93-22O10, complete sequence
          Length = 156548

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                             
Query: 257    cacccctgtccacc--cgttgttgttaatgc 285
              ||||||||||||||  |||||||||||||||
Sbjct: 137779 cacccctgtccaccgccgttgttgttaatgc 137749

>gb|AC159408.1| Trypanosoma brucei chromosome 7 clone RPCI93-13M20, complete sequence
          Length = 162223

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                             
Query: 257    cacccctgtccacc--cgttgttgttaatgc 285
              ||||||||||||||  |||||||||||||||
Sbjct: 160317 cacccctgtccaccgccgttgttgttaatgc 160347

>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                             
Query: 257    cacccctgtccacc--cgttgttgttaatgc 285
              ||||||||||||||  |||||||||||||||
Sbjct: 683320 cacccctgtccaccgccgttgttgttaatgc 683290

>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 38552 attcaacgtttttattcctttttt 38529

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     ggcccggtcgaagtcgccgt 222
               ||||||||||||||||||||
Sbjct: 2648636 ggcccggtcgaagtcgccgt 2648617

>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence
          Length = 197482

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cttttattccttttttgatt 38
             ||||||||||||||||||||
Sbjct: 66041 cttttattccttttttgatt 66022

>gb|AC121546.13| Mus musculus chromosome 6, clone RP24-537N12, complete sequence
          Length = 207556

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    gccgttctccaaagcaaagctgaa 241
              ||||||||||||||||||| ||||
Sbjct: 117915 gccgttctccaaagcaaagatgaa 117938

>gb|AC123051.4| Mus musculus BAC clone RP24-366E4 from chromosome 6, complete sequence
          Length = 143909

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   gccgttctccaaagcaaagctgaa 241
             ||||||||||||||||||| ||||
Sbjct: 30447 gccgttctccaaagcaaagatgaa 30424

>emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, complete sequence
          Length = 30182

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ttttattccttttttgattc 39
             ||||||||||||||||||||
Sbjct: 29284 ttttattccttttttgattc 29265

>gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472

>gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 550

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472

>gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837

>gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1327

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837

>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
          Length = 86690

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    gattcgaaacaaagttgttc 54
             ||||||||||||||||||||
Sbjct: 15695 gattcgaaacaaagttgttc 15714

>ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, complete cds
          Length = 2356

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttttattccttttttgattc 39
            ||||||||||||||||||||
Sbjct: 2225 ttttattccttttttgattc 2244

>gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (At5g01520) mRNA,
           complete cds
          Length = 729

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472

>emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1047D15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183418

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ataagagttggttccccttc 90
             ||||||||||||||||||||
Sbjct: 28958 ataagagttggttccccttc 28939

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      taagagttggttccccttca 91
               ||||||||||||||||||||
Sbjct: 1761075 taagagttggttccccttca 1761056

>emb|BX004845.5| Zebrafish DNA sequence from clone CH211-67O1, complete sequence
          Length = 165089

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     aggttttacagttttttcac 110
              ||||||||||||||||||||
Sbjct: 106236 aggttttacagttttttcac 106217


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,471,722
Number of Sequences: 3902068
Number of extensions: 2471722
Number of successful extensions: 53834
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 53752
Number of HSP's gapped (non-prelim): 80
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)