>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence
          Length = 117437

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 218   gcaagcagcacagcacagcaca 239
             ||||||||||||||||||||||
Sbjct: 27034 gcaagcagcacagcacagcaca 27055

>gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, complete sequence
          Length = 193777

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    aggaccttgcaagcagcacag 230
              |||||||||||||||||||||
Sbjct: 184822 aggaccttgcaagcagcacag 184802

>gb|AC167707.2| Reniera sp. JGI-2005 clone JGIBAYC-9L12, complete sequence
          Length = 40570

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 281   caaaaccaaccaaaagccaca 301
             |||||||||||||||||||||
Sbjct: 12679 caaaaccaaccaaaagccaca 12659

>gb|AC123616.11| Mus musculus chromosome 8, clone RP23-4F1, complete sequence
          Length = 228851

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    aggaccttgcaagcagcacag 230
              |||||||||||||||||||||
Sbjct: 108739 aggaccttgcaagcagcacag 108759

>gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosome 8, complete sequence
          Length = 204342

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    aggaccttgcaagcagcacag 230
              |||||||||||||||||||||
Sbjct: 202779 aggaccttgcaagcagcacag 202799

>emb|AL157882.5| Human DNA sequence from clone RP11-202I11 on chromosome 9q21.32-22.2
             Contains the 5' end of the AGTPBP1 gene for  ATP/GTP
             binding protein 1 (NNA1, KIAA1035), a novel gene, the 5'
             end of a pseudogene similar to part of a novel protein
             (DKFZp434D0917) and a CpG island, complete sequence
          Length = 172903

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 363   gtaaaaacaagcacatatgattgat 387
             ||||||||||| |||||||||||||
Sbjct: 63249 gtaaaaacaagtacatatgattgat 63273

>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166083

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 367    aaacaagcacatatgattgat 387
              |||||||||||||||||||||
Sbjct: 146682 aaacaagcacatatgattgat 146662

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 220      aagcagcacagcacagcacac 240
                |||||||||||||||||||||
Sbjct: 20452453 aagcagcacagcacagcacac 20452473



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      aagcagcacagcacagcaca 239
                ||||||||||||||||||||
Sbjct: 21854019 aagcagcacagcacagcaca 21854038

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 377      atatgattgattgatctcattctgc 401
                ||||||||||||||||| |||||||
Sbjct: 28255741 atatgattgattgatctgattctgc 28255717

>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 377   atatgattgattgatctcattctgc 401
             ||||||||||||||||| |||||||
Sbjct: 53770 atatgattgattgatctgattctgc 53746

>emb|BX005215.13| Mouse DNA sequence from clone RP23-280F9 on chromosome X, complete
              sequence
          Length = 189900

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     tccaagttgtttcagcaatct 35
              |||||||||||||||||||||
Sbjct: 105790 tccaagttgtttcagcaatct 105770

>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 220   aagcagcacagcacagcacac 240
             |||||||||||||||||||||
Sbjct: 83083 aagcagcacagcacagcacac 83103

>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence
          Length = 156084

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   agcagcacagcacagcacac 240
             ||||||||||||||||||||
Sbjct: 32602 agcagcacagcacagcacac 32583

>ref|XM_592663.2| PREDICTED: Bos taurus similar to transmembrane protein 17
           (LOC514758), mRNA
          Length = 1849

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 12  ctttccaagttgtttcagca 31
           ||||||||||||||||||||
Sbjct: 611 ctttccaagttgtttcagca 630

>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aagcagcacagcacagcaca 239
              ||||||||||||||||||||
Sbjct: 185816 aagcagcacagcacagcaca 185835

>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence
          Length = 213163

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    gagaaaaaccatacacatat 179
              ||||||||||||||||||||
Sbjct: 195026 gagaaaaaccatacacatat 195045

>gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 map 1, complete sequence
          Length = 197679

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ccttccaaaacatacccagg 125
              ||||||||||||||||||||
Sbjct: 172430 ccttccaaaacatacccagg 172411

>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence
          Length = 139125

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   aagcagcacagcacagcaca 239
             ||||||||||||||||||||
Sbjct: 91892 aagcagcacagcacagcaca 91873

>gb|AC122248.5| Mus musculus BAC clone RP23-156N18 from 7, complete sequence
          Length = 198901

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ctctttccaagttgtttcag 29
              ||||||||||||||||||||
Sbjct: 122637 ctctttccaagttgtttcag 122618

>gb|AC091708.2| Gallus gallus clone XXbac-68C5, complete sequence
          Length = 124309

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   ctagacatataggtaacatataat 71
            ||||||||||||| ||||||||||
Sbjct: 5808 ctagacatataggaaacatataat 5831

>emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in linkage group 17,
              complete sequence
          Length = 185139

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 352    tgatgagaggggtaaaaaca 371
              ||||||||||||||||||||
Sbjct: 117439 tgatgagaggggtaaaaaca 117420

>gb|AC163701.4| Gallus gallus BAC clone CH261-117C7 from chromosome unknown, complete
              sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 48     ctagacatataggtaacatataat 71
              ||||||||||||| ||||||||||
Sbjct: 214468 ctagacatataggaaacatataat 214445

>dbj|AK030732.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730424L04 product:hypothetical
           Ubiquitin carboxyl-terminal hydrolase family 2
           containing protein, full insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 ccttccaaaacatacccagg 125
           ||||||||||||||||||||
Sbjct: 213 ccttccaaaacatacccagg 194

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 223      cagcacagcacagcacactc 242
                ||||||||||||||||||||
Sbjct: 29562271 cagcacagcacagcacactc 29562252

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     agcagcacagcacagcacac 240
               ||||||||||||||||||||
Sbjct: 5079827 agcagcacagcacagcacac 5079808

>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   agcagcacagcacagcacac 240
             ||||||||||||||||||||
Sbjct: 40325 agcagcacagcacagcacac 40306

>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   cagcacagcacagcacactc 242
             ||||||||||||||||||||
Sbjct: 88943 cagcacagcacagcacactc 88924

>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    aagcagcacagcacagcaca 239
              ||||||||||||||||||||
Sbjct: 133602 aagcagcacagcacagcaca 133621

>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   aagcagcacagcacagcaca 239
             ||||||||||||||||||||
Sbjct: 54688 aagcagcacagcacagcaca 54707

>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    acaaacgaaagaatgaccta 271
              ||||||||||||||||||||
Sbjct: 113991 acaaacgaaagaatgaccta 113972

>emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in linkage group 22,
             complete sequence
          Length = 123466

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   agcagcacagcacagcacac 240
             ||||||||||||||||||||
Sbjct: 90010 agcagcacagcacagcacac 90029

>gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complete sequence
          Length = 176698

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   aagcagcacagcacagcaca 239
             ||||||||||||||||||||
Sbjct: 51600 aagcagcacagcacagcaca 51581

>dbj|AP006391.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09E08, TM0265,
             complete sequence
          Length = 100864

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    gttgtttcagcaatcttcaa 39
             ||||||||||||||||||||
Sbjct: 88351 gttgtttcagcaatcttcaa 88370

>dbj|AB066524.1| Macaca fascicularis brain cDNA clone:QmoA-11085, full insert
           sequence
          Length = 1776

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 aaccgagaaaaaccatacac 175
           ||||||||||||||||||||
Sbjct: 129 aaccgagaaaaaccatacac 110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,796,330
Number of Sequences: 3902068
Number of extensions: 3796330
Number of successful extensions: 82165
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82005
Number of HSP's gapped (non-prelim): 160
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)