ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence 196 4e-47
2gb|AY105873.1| Zea mays PCO094136 mRNA sequence 196 4e-47
3ref|NM_189191.1| Oryza sativa (japonica cultivar-group), predic... 168 1e-38
4dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
6dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
7dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
8gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9,... 42 1.5
9gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosom... 42 1.5
10gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete se... 42 1.5
11gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome... 42 1.5
12emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chr... 42 1.5
13ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-co... 40 6.1
14gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, com... 40 6.1
15gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, comp... 40 6.1
16gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, co... 40 6.1
17gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete s... 40 6.1
18emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chr... 40 6.1
19emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 ... 40 6.1
20emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in... 40 6.1
21gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, comp... 40 6.1
22ref|XM_684436.1| PREDICTED: Danio rerio similar to apoptosis-ind... 40 6.1
23ref|XM_680044.1| PREDICTED: Danio rerio similar to apoptosis-ind... 40 6.1
24gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 40 6.1
25gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome... 40 6.1
26gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, comp... 40 6.1
27emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 ... 40 6.1
28emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in... 40 6.1
29gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 6.1
30gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.64... 40 6.1
31emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 6.1 
>gb|BT018899.1| Zea mays clone EL01T0207E03.d mRNA sequence
          Length = 1585

 Score =  196 bits (99), Expect = 4e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                        
Query: 186  ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 245
            |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 1389 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 1330

                                                                        
Query: 246  gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 305
            | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 1329 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 1270

                                                                        
Query: 306  ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagttcctgtt 365
             || ||| |||||||||||||||||||| || |||||||| ||||||||||||||||| |
Sbjct: 1269 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcagttcctgct 1210

                                                       
Query: 366  tgtgatgccgctcttcagttttatatttaagaggaccaacatg 408
            | ||||| ||||| |||||||||||||| || |||||||||||
Sbjct: 1209 tttgatgacgctcctcagttttatatttgaggggaccaacatg 1167
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>gb|AY105873.1| Zea mays PCO094136 mRNA sequence
          Length = 809

 Score =  196 bits (99), Expect = 4e-47
 Identities = 192/223 (86%)
 Strand = Plus / Minus

                                                                       
Query: 186 ctctctttctcaatattgtcttccgtggttcctttctgctcggtgtgtttcctgaactta 245
           |||||||||| |||||  |||| ||||| |||||| || ||||||   | |||||||  |
Sbjct: 575 ctctctttcttaatatattcttgcgtggctcctttttggtcggtgccatccctgaaccca 516

                                                                       
Query: 246 gggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactgatcacga 305
           | |||||||| ||||||||||||||||| ||||| || |||||||||||||||||||| |
Sbjct: 515 gagaagtcatccctacagcgctctggtataagtcatttaaccttggcatactgatcacca 456

                                                                       
Query: 306 ctgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagttcctgtt 365
            || ||| |||||||||||||||||||| || |||||||| ||||||||||||||||| |
Sbjct: 455 gtgcaaccacagaaactccaacaataagcggaaaaactggtgctggggtcagttcctgct 396

                                                      
Query: 366 tgtgatgccgctcttcagttttatatttaagaggaccaacatg 408
           | ||||| ||||| |||||||||||||| || |||||||||||
Sbjct: 395 tttgatgacgctcctcagttttatatttgaggggaccaacatg 353
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>ref|NM_189191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3582

 Score =  168 bits (85), Expect = 1e-38
 Identities = 172/201 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 298
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 3524 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 3465

                                                                        
Query: 299  atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagt 358
            || || | || ||  || |||||||| ||||||||||| || || |||||||| || | |
Sbjct: 3464 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctggagttaat 3405

                                                                        
Query: 359  tcctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggt 418
            |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3404 tcctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggt 3345

                                 
Query: 419  tgctcttctaggtcaacttca 439
            ||||  || | ||||||||||
Sbjct: 3344 tgcttgtccaagtcaacttca 3324
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>dbj|AK058273.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B11, full
            insert sequence
          Length = 1629

 Score =  168 bits (85), Expect = 1e-38
 Identities = 172/201 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  gaacttagggaagtcattcctacagcgctctggtacaagtccttcaaccttggcatactg 298
            |||| ||||| ||||||||| ||||| || ||||||||||| || | ||||||||| |||
Sbjct: 1183 gaacctagggtagtcattcccacagcactttggtacaagtcttttagccttggcatgctg 1124

                                                                        
Query: 299  atcacgactgtaacaacagaaactccaacaataagaggtaaaactggggctggggtcagt 358
            || || | || ||  || |||||||| ||||||||||| || || |||||||| || | |
Sbjct: 1123 atgaccaatgcaatcacggaaactccgacaataagaggaaatacaggggctggagttaat 1064

                                                                        
Query: 359  tcctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggt 418
            |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1063 tcctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggt 1004

                                 
Query: 419  tgctcttctaggtcaacttca 439
            ||||  || | ||||||||||
Sbjct: 1003 tgcttgtccaagtcaacttca 983
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                            
Query: 360      cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 419
                ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11024477 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 11024536

                                    
Query: 420      gctcttctaggtcaacttca 439
                |||  || | ||||||||||
Sbjct: 11024537 gcttgtccaagtcaacttca 11024556



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 239      gaacttagggaagtcattcctacagcgctctggtacaagtc 279
                |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 11023970 gaacctagggtagtcattcccacagcactttggtacaagtc 11024010



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 284      aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 343
                ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 11024109 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 11024168

                        
Query: 344      ggggctgg 351
                ||||||||
Sbjct: 11024169 ggggctgg 11024176
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>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0682B08
          Length = 138376

 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                         
Query: 360   cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 419
             ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 53359 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 53418

                                 
Query: 420   gctcttctaggtcaacttca 439
             |||  || | ||||||||||
Sbjct: 53419 gcttgtccaagtcaacttca 53438



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 239   gaacttagggaagtcattcctacagcgctctggtacaagtc 279
             |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 52852 gaacctagggtagtcattcccacagcactttggtacaagtc 52892



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 284   aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 343
             ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 52991 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 53050

                     
Query: 344   ggggctgg 351
             ||||||||
Sbjct: 53051 ggggctgg 53058
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>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0487H02
          Length = 145491

 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                          
Query: 360    cctgtttgtgatgccgctcttcagttttatatttaagaggaccaacatgaatctgaggtt 419
              ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 127319 cctgtttgtgatgtcgctcttcggttttatatttaagaggaccaacatgaatctgaggtt 127378

                                  
Query: 420    gctcttctaggtcaacttca 439
              |||  || | ||||||||||
Sbjct: 127379 gcttgtccaagtcaacttca 127398



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 239    gaacttagggaagtcattcctacagcgctctggtacaagtc 279
              |||| ||||| ||||||||| ||||| || |||||||||||
Sbjct: 126812 gaacctagggtagtcattcccacagcactttggtacaagtc 126852



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                          
Query: 284    aaccttggcatactgatcacgactgtaacaacagaaactccaacaataagaggtaaaact 343
              ||||||||||| ||||| || | || ||  || |||||||| ||||||||||| || || 
Sbjct: 126951 aaccttggcatgctgatgaccaatgcaatcacggaaactccgacaataagaggaaataca 127010

                      
Query: 344    ggggctgg 351
              ||||||||
Sbjct: 127011 ggggctgg 127018
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>gb|U92838.1|MMSALH06 Mus musculus sialoadhesin gene, exons 8, 9, and 10
          Length = 1772

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 221 ctgctcggtgtgtttcctgaa 241
           |||||||||||||||||||||
Sbjct: 22  ctgctcggtgtgtttcctgaa 42
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>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence
          Length = 187416

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    taacaacagaaactccaacaa 329
              |||||||||||||||||||||
Sbjct: 153736 taacaacagaaactccaacaa 153756
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>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 38     aaatattagtcaacaatggtacaaa 62
              |||||||||||||||||| ||||||
Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319
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>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence
          Length = 200505

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 309    taacaacagaaactccaacaa 329
              |||||||||||||||||||||
Sbjct: 170731 taacaacagaaactccaacaa 170711
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>emb|AL831736.15| Mouse DNA sequence from clone RP23-32L15 on chromosome 2, complete
             sequence
          Length = 126358

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   ctgctcggtgtgtttcctgaa 241
             |||||||||||||||||||||
Sbjct: 11160 ctgctcggtgtgtttcctgaa 11140
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>ref|XM_642090.1| Dictyostelium discoideum SNF2-related domain-containing protein
            (DDB0220518), partial mRNA
          Length = 9210

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  actgtaacaacagaaactccaaca 328
            ||||||||||||| ||||||||||
Sbjct: 8839 actgtaacaacagtaactccaaca 8862
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>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ctttctcaatattgtcttcc 209
             ||||||||||||||||||||
Sbjct: 12002 ctttctcaatattgtcttcc 11983
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>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence
          Length = 203478

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    ctttctcaatattgtcttcc 209
              ||||||||||||||||||||
Sbjct: 195772 ctttctcaatattgtcttcc 195753
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>gb|AC137123.7| Mus musculus chromosome 15, clone RP23-401L15, complete sequence
          Length = 232054

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 411   tctgaggttgctcttctaggtcaa 434
             |||| |||||||||||||||||||
Sbjct: 75421 tctgtggttgctcttctaggtcaa 75398
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>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence
          Length = 114996

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   atatttaagaggaccaacatgaat 411
             ||||||||||||||||| ||||||
Sbjct: 34798 atatttaagaggaccaaaatgaat 34821
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>emb|AL158091.31| Human DNA sequence from clone RP5-824A14 on chromosome 20 Contains the
             5' end of the BTBD4 gene for BTB (POZ) domain containing
             4, part of a gene for a tissue plasminogen activator
             protein and two CpG islands, complete sequence
          Length = 41932

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   cctttctgctcggtgtgttt 235
             ||||||||||||||||||||
Sbjct: 12460 cctttctgctcggtgtgttt 12441
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>emb|BX890581.13| Zebrafish DNA sequence from clone CH211-222O19 in linkage group 21,
             complete sequence
          Length = 205143

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gtgatgccgctcttcagttt 386
             ||||||||||||||||||||
Sbjct: 50891 gtgatgccgctcttcagttt 50910
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>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18,
              complete sequence
          Length = 164758

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    tgtttcaggctctctttctc 196
              ||||||||||||||||||||
Sbjct: 128434 tgtttcaggctctctttctc 128415
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>gb|AC094099.3| Homo sapiens chromosome 5 clone RP11-153B10, complete sequence
          Length = 68440

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   tatgtttcaggctctctttc 194
             ||||||||||||||||||||
Sbjct: 64829 tatgtttcaggctctctttc 64810
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>ref|XM_684436.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like
           isoform 1 (LOC561033), partial mRNA
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 gtgatgccgctcttcagttt 386
           ||||||||||||||||||||
Sbjct: 848 gtgatgccgctcttcagttt 829
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>ref|XM_680044.1| PREDICTED: Danio rerio similar to apoptosis-inducing factor like
           isoform 2 (LOC557064), mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 gtgatgccgctcttcagttt 386
           ||||||||||||||||||||
Sbjct: 917 gtgatgccgctcttcagttt 898
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>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    gtcagttcctgtttgtgatg 372
              ||||||||||||||||||||
Sbjct: 106996 gtcagttcctgtttgtgatg 106977
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>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tacaaaatattagtcaacaa 53
              ||||||||||||||||||||
Sbjct: 131842 tacaaaatattagtcaacaa 131823
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>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  tatgtttcaggctctctttc 194
            ||||||||||||||||||||
Sbjct: 2684 tatgtttcaggctctctttc 2665
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>emb|AL929193.19| Zebrafish DNA sequence from clone CH211-274P24 in linkage group 20,
              complete sequence
          Length = 159094

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    gtgatgccgctcttcagttt 386
              ||||||||||||||||||||
Sbjct: 136435 gtgatgccgctcttcagttt 136416
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>emb|CR450838.5| Zebrafish DNA sequence from clone DKEY-283N16 in linkage group 18,
             complete sequence
          Length = 145250

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tgtttcaggctctctttctc 196
             ||||||||||||||||||||
Sbjct: 91226 tgtttcaggctctctttctc 91207
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      acaaaatattagtcaacaat 54
               ||||||||||||||||||||
Sbjct: 2555987 acaaaatattagtcaacaat 2555968
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>gb|AC005245.1|AC005245 Homo sapiens chromosome 17, clone hRPK.642_C_21, complete sequence
          Length = 172084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   cagttttatatttaagagga 400
             ||||||||||||||||||||
Sbjct: 26662 cagttttatatttaagagga 26643
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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aaatattagtcaacaatggt 57
             ||||||||||||||||||||
Sbjct: 59691 aaatattagtcaacaatggt 59710


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,728,433
Number of Sequences: 3902068
Number of extensions: 4728433
Number of successful extensions: 81651
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81554
Number of HSP's gapped (non-prelim): 95
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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