ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl33b02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 153 bits (387), Expect = 2e-37 Identities = 75/80 (93%), Positives = 75/80 (93%), Gaps = 5/80 (6%) Frame = -2 Query: 465 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----D 301 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS D Sbjct: 857 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 916 Query: 300 GDPTDEKMVMEMGIPNSISI 241 GDPTDEKMVMEMGIPNSISI Sbjct: 917 GDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 110 bits (275), Expect = 2e-24 Identities = 49/75 (65%), Positives = 61/75 (81%) Frame = -2 Query: 465 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 286 EPAW +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D Sbjct: 858 EPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMD 917 Query: 285 EKMVMEMGIPNSISI 241 K VMEMGIPNSISI Sbjct: 918 AKTVMEMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 63.9 bits (154), Expect = 2e-10 Identities = 34/75 (45%), Positives = 45/75 (60%) Frame = -2 Query: 465 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 286 EPAW + ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL+ P Sbjct: 827 EPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFS 881 Query: 285 EKMVMEMGIPNSISI 241 E V GIPNSISI Sbjct: 882 EPGVTGRGIPNSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 58.2 bits (139), Expect = 1e-08 Identities = 29/75 (38%), Positives = 42/75 (56%) Frame = -2 Query: 465 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 286 + AWT D A EF R+ E+++ N DP R+NR GAG++PY L+ PS G Sbjct: 830 DEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-- 887 Query: 285 EKMVMEMGIPNSISI 241 + G+PNS++I Sbjct: 888 ---ITCRGVPNSVTI 899
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 57.8 bits (138), Expect = 1e-08 Identities = 34/75 (45%), Positives = 43/75 (57%) Frame = -2 Query: 465 EPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD 286 E +W + VIN AFE FK + + +DE N + KNR GAG+V Y LL+ PT Sbjct: 827 EASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTS 881 Query: 285 EKMVMEMGIPNSISI 241 E V MG+P SISI Sbjct: 882 EHGVTGMGVPYSISI 896
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D AF+ F I ++ + N + KNR+G +PY+LL P+ D T E Sbjct: 802 PEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKE 861 Query: 282 K--MVMEMGIPNSISI 241 K + MGIPNSISI Sbjct: 862 KGQGLTAMGIPNSISI 877
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 54.7 bits (130), Expect = 1e-07 Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 1/75 (1%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTD 286 P WT D +AF+ F +I +V N DP RKNR G PY LL P+ D D Sbjct: 796 PEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD 855 Query: 285 EKMVMEMGIPNSISI 241 + GIPNSISI Sbjct: 856 AAGLSARGIPNSISI 870
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 54.7 bits (130), Expect = 1e-07 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 WT D V +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ Sbjct: 800 WTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEG 854 Query: 276 VMEMGIPNSISI 241 + GIPNSISI Sbjct: 855 LTCRGIPNSISI 866
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 53.9 bits (128), Expect = 2e-07 Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 PAWT D +AF F + +I +V N D KNR+G PY+LL P+ D T Sbjct: 792 PAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGA 851 Query: 282 KM-VMEMGIPNSISI 241 + GIPNSISI Sbjct: 852 AAGITAKGIPNSISI 866
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 53.1 bits (126), Expect = 3e-07 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D Sbjct: 788 PEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGA 847 Query: 282 KM-VMEMGIPNSISI 241 + GIPNSISI Sbjct: 848 AAGLTAKGIPNSISI 862
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 52.8 bits (125), Expect = 4e-07 Identities = 30/72 (41%), Positives = 40/72 (55%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 W + +AFE+F E ++I + +DE N+D KNR G +PY LL PS E Sbjct: 793 WAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGG 847 Query: 276 VMEMGIPNSISI 241 V GIPNS+SI Sbjct: 848 VTGRGIPNSVSI 859
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 52.4 bits (124), Expect = 6e-07 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPTD 286 P WT D QAF++F ++I E++ NNDP + NR G +PY LL PS Sbjct: 770 PHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----S 824 Query: 285 EKMVMEMGIPNSISI 241 E+ + GIPNSISI Sbjct: 825 EEGLTFRGIPNSISI 839
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 52.0 bits (123), Expect = 8e-07 Identities = 29/74 (39%), Positives = 42/74 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D +AF++F +I +++ + NND +NRHG +PY LL PS + Sbjct: 793 PNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SK 847 Query: 282 KMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 848 EGLTFRGIPNSISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 52.0 bits (123), Expect = 8e-07 Identities = 30/74 (40%), Positives = 38/74 (51%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D QAF++F ++I E++ NND NR G +PY LL P+ T Sbjct: 798 PHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR 857 Query: 282 KMVMEMGIPNSISI 241 GIPNSISI Sbjct: 858 ------GIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/74 (39%), Positives = 39/74 (52%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D QAF++F +I ++ NNDP +R G +PY LL PS + Sbjct: 796 PHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SK 850 Query: 282 KMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 851 EGLTFRGIPNSISI 864
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 W D + A++ F ++I +D N D KNR GAG++PY L++ P + Sbjct: 858 WNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSG 912 Query: 276 VMEMGIPNSISI 241 V MGIPNS SI Sbjct: 913 VTGMGIPNSTSI 924
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/74 (39%), Positives = 39/74 (52%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D +AF+ F +I ++ E NND +NR G +PY LL PS + Sbjct: 789 PNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SK 843 Query: 282 KMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 844 EGLTFRGIPNSISI 857
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 49.3 bits (116), Expect = 5e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 WT D +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEG 841 Query: 276 VMEMGIPNSISI 241 + GIPNSISI Sbjct: 842 LTFRGIPNSISI 853
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEK 280 W D + A+ F ++I +D N D KNR GAG++PY L++P SD T Sbjct: 875 WNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG-- 932 Query: 279 MVMEMGIPNSISI 241 MGIPNS SI Sbjct: 933 ----MGIPNSTSI 941
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 49.3 bits (116), Expect = 5e-06 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD- 286 P WT D +AF+ F +I +V N DP KNR G PY L+ P+ D Sbjct: 789 PEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGA 848 Query: 285 EKMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 849 AEGITARGIPNSISI 863
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 48.9 bits (115), Expect = 6e-06 Identities = 30/72 (41%), Positives = 36/72 (50%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 WT D A F R+ E ++ N D RKNR GAG++PY LL PS Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPG 906 Query: 276 VMEMGIPNSISI 241 V G+PNSISI Sbjct: 907 VTCRGVPNSISI 918
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/74 (35%), Positives = 42/74 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT + QAF+ F + ++I E++ N D +NR+G +PY +L P+ ++ Sbjct: 793 PNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CED 848 Query: 282 KMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 849 EGLTFRGIPNSISI 862
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 47.0 bits (110), Expect = 2e-05 Identities = 28/74 (37%), Positives = 38/74 (51%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WT D +AF+ F I +++ N+DP +NR G +PY LL S E Sbjct: 796 PNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SE 850 Query: 282 KMVMEMGIPNSISI 241 + + GIPNSISI Sbjct: 851 EGLTFKGIPNSISI 864
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 45.8 bits (107), Expect = 5e-05 Identities = 29/74 (39%), Positives = 36/74 (48%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WTKD AF+ F + I +Q+ + N D NR G PY LL PT E Sbjct: 793 PEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSE 847 Query: 282 KMVMEMGIPNSISI 241 + GIPNS+SI Sbjct: 848 GGLTGKGIPNSVSI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/72 (40%), Positives = 36/72 (50%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM 277 WTKD AFE F + I ++ N+ KNR G VPY LL PT E+ Sbjct: 793 WTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEG 847 Query: 276 VMEMGIPNSISI 241 + GIPNS+SI Sbjct: 848 LTGKGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/74 (39%), Positives = 35/74 (47%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDE 283 P WTKD AFE F I +Q+ + N + NR G PY LL PT E Sbjct: 792 PEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSE 846 Query: 282 KMVMEMGIPNSISI 241 + GIPNS+SI Sbjct: 847 GGLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 40.0 bits (92), Expect = 0.003 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = -2 Query: 456 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 304 WT D +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -1 Query: 394 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 236 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -2 Query: 453 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 331 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 30.4 bits (67), Expect = 2.3 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = -2 Query: 453 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 331 T+ G+I F+E + RK++ + W D + K R +G+ Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 326 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 442 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>MUTS_NEIMB (Q9JX94) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -2 Query: 465 EPA-WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 331 EP+ W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIMA (Q9JWT7) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -2 Query: 465 EPA-WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 331 EP+ W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>MUTS_NEIG1 (Q5F5J4) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -2 Query: 465 EPA-WTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 331 EP+ W KDG VIN F + R+I DE+ D + K R G+ Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGL 454
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 6.8 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -2 Query: 384 VDEWNNDPDRKNRHGAGMVPYV 319 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>PURA_STAAR (Q6GKS8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAN (P99099) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAM (P65884) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAW (Q8NYX6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAS (Q6GD73) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAC (Q5HJX8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -2 Query: 462 PAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 367 P WT+D + EE E+ RK +E++ E N Sbjct: 374 PGWTEDVTNVRTLEELPENARKYLERISELCN 405
>YK86_CAEEL (P34352) Hypothetical protein C30A5.6| Length = 362 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = +2 Query: 20 LI*CTVERLSNLALFM*YLVTLERDYLVQHIYISSCPLII---IWCSFPLYPPPGQETED 190 L+ C++ L +L F+ L TL+ +QH+ IS ++ ++ S PL P +T D Sbjct: 212 LLSCSLIALLSLLSFIFALATLKHSQSLQHLMISILAILFETALYVSLPLIP---YKTRD 268 Query: 191 TLI 199 T++ Sbjct: 269 TVM 271
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -1 Query: 361 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 257 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,523,876 Number of Sequences: 219361 Number of extensions: 1493479 Number of successful extensions: 4208 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4014 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4183 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
