ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl33b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, com... 42 1.5
2gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, co... 42 1.5
3gb|AC122734.6| Mus musculus chromosome 10, clone RP24-108E17, co... 42 1.5
4emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in l... 42 1.5
5emb|Z97875.1|HL52ALLER Holcus lanatus mRNA for group V grass pol... 42 1.5
6emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene 42 1.5
7emb|AL807389.7| Zebrafish DNA sequence from clone CH211-237L4 in... 42 1.5
8emb|BX470099.5| Zebrafish DNA sequence from clone DKEY-14P11 in ... 42 1.5
9gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.5
10dbj|AP008983.1| Bacteriophage c-st DNA, complete genome 42 1.5
11emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 i... 42 1.5
12dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.5
13gb|AC091681.44| Mus musculus strain C57BL/6J chromosome 10 clone... 42 1.5
14emb|X95524.1|MMUTROPRO M.musculus utrophin gene (promoter and ex... 42 1.5
15gb|AY838876.1| Homo sapiens glycophorin C (Gerbich blood group) ... 40 6.1
16gb|AC105982.10| Mus musculus chromosome 15, clone RP24-159I1, co... 40 6.1
17gb|BC034918.1| Homo sapiens chromosome 9 open reading frame 45, ... 40 6.1
18gb|BC015678.2| Homo sapiens chromosome 9 open reading frame 45, ... 40 6.1
19gb|AC101757.12| Mus musculus chromosome 8, clone RP24-545I11, co... 40 6.1
20ref|XM_455957.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F19536g ... 40 6.1
21emb|CT009673.10| Zebrafish DNA sequence from clone CH73-334L20 i... 40 6.1
22emb|CR933765.9| Zebrafish DNA sequence from clone DKEY-215B24 in... 40 6.1
23emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in... 40 6.1
24emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 i... 40 6.1
25emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in ... 40 6.1
26emb|AL583860.7| Human DNA sequence from clone RP11-16P8 on chrom... 40 6.1
27emb|AL365338.17| Human DNA sequence from clone RP11-123N4 on chr... 40 6.1
28gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, com... 40 6.1
29emb|AL137140.12| Human DNA sequence from clone RP11-137M6 on chr... 40 6.1
30emb|AL024474.1|HS91J24 Human DNA sequence from clone RP1-91J24 o... 40 6.1
31emb|CR383676.21| Zebrafish DNA sequence from clone CH211-276I12 ... 40 6.1
32emb|BX046481.1|CNS09811 Single read from an extremity of a full-... 40 6.1
33emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.1
34emb|AL808129.8| Zebrafish DNA sequence from clone CH211-255F14 i... 40 6.1
35emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BA... 40 6.1
36emb|CR376845.7| Zebrafish DNA sequence from clone CH211-244C8 in... 40 6.1
37gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park C... 40 6.1
38emb|BX571828.6| Zebrafish DNA sequence from clone DKEY-281I15 in... 40 6.1
39emb|CR749230.1| Homo sapiens mRNA; cDNA DKFZp779O012 (from clone... 40 6.1
40dbj|AK123844.1| Homo sapiens cDNA FLJ41850 fis, clone NT2RI30037... 40 6.1
41gb|AC103581.10| Danio rerio strain AB clone busm1-144f12, comple... 40 6.1
42gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 ma... 40 6.1
43gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete ... 40 6.1
44ref|NM_030814.4| Homo sapiens chromosome 9 open reading frame 45... 40 6.1
45emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, co... 40 6.1
46emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in l... 40 6.1
47emb|BX510996.12| Zebrafish DNA sequence from clone DKEYP-81E1 in... 40 6.1
48emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 i... 40 6.1
49emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in... 40 6.1
50emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in ... 40 6.1
51gb|AC159630.2| Mus musculus BAC clone RP24-173F2 from chromosome... 40 6.1
52dbj|AK032364.1| Mus musculus adult male olfactory brain cDNA, RI... 40 6.1
53ref|NM_001028668.1| Caenorhabditis elegans F25C8.3a (F25C8.3) mR... 40 6.1
54ref|NM_001028669.1| Caenorhabditis elegans F25C8.3b (F25C8.3) mR... 40 6.1
55emb|BX511206.17| Zebrafish DNA sequence from clone CH211-122P23 ... 40 6.1
56gb|AC013474.10| Homo sapiens BAC clone RP11-505O20 from 2, compl... 40 6.1
57gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, com... 40 6.1
58emb|BX323990.6| Zebrafish DNA sequence from clone DKEYP-69B4 in ... 40 6.1
59gb|AC009511.16|AC009511 Homo sapiens 12 BAC RP11-860B13 (Roswell... 40 6.1
60gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, comple... 40 6.1
61emb|BX648949.1|HSM809100 Homo sapiens mRNA; cDNA DKFZp686L1848 (... 40 6.1
62dbj|AK025814.1| Homo sapiens cDNA: FLJ22161 fis, clone HRC00290 40 6.1
63emb|CR759867.5| Zebrafish DNA sequence from clone CH211-233F16 i... 40 6.1
64emb|BX890548.9| Zebrafish DNA sequence from clone CH211-238E22 i... 40 6.1
65emb|BX323595.8| Zebrafish DNA sequence from clone CH211-155O21 i... 40 6.1
66emb|BX284681.4| Zebrafish DNA sequence from clone DKEY-197D18 in... 40 6.1
67gb|AC007172.6|AC007172 Homo sapiens chromosome 9, clone hRPK.538... 40 6.1
68emb|Z81512.1|CEF25C8 Caenorhabditis elegans Cosmid F25C8, comple... 40 6.1
69emb|AL954661.10| Zebrafish DNA sequence from clone CH211-155C19 ... 40 6.1
70gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, comple... 40 6.1
71emb|CT010452.9| Mouse DNA sequence from clone RP23-424B20 on chr... 40 6.1
72emb|AL929130.4| Zebrafish DNA sequence from clone CH211-287M16 i... 40 6.1
73emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, ... 40 6.1
74emb|AL935292.5| Zebrafish DNA sequence from clone CH211-277P15, ... 40 6.1
75emb|X95523.1|HSUTROPRO H.sapiens utrophin gene (promoter DNA and... 40 6.1
76emb|AL627406.15| Mouse DNA sequence from clone RP23-188A12 on ch... 40 6.1 
>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence
          Length = 188138

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     aacaaggaaaagaaaaagaga 104
              |||||||||||||||||||||
Sbjct: 131348 aacaaggaaaagaaaaagaga 131368
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>gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, complete sequence
          Length = 168159

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     aacaaggaaaagaaaaagaga 104
              |||||||||||||||||||||
Sbjct: 163635 aacaaggaaaagaaaaagaga 163655
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>gb|AC122734.6| Mus musculus chromosome 10, clone RP24-108E17, complete sequence
          Length = 178230

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 415    cctcccagcccgcagcagccg 435
              |||||||||||||||||||||
Sbjct: 134642 cctcccagcccgcagcagccg 134662
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>emb|CR388032.9| Zebrafish DNA sequence from clone DKEY-22L9 in linkage group 23,
             complete sequence
          Length = 271754

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   taaatttacaagtcaaattaa 249
             |||||||||||||||||||||
Sbjct: 70506 taaatttacaagtcaaattaa 70486
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>emb|Z97875.1|HL52ALLER Holcus lanatus mRNA for group V grass pollen allergen
          Length = 977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 418 cccagcccgcagcagccgcca 438
           |||||||||||||||||||||
Sbjct: 641 cccagcccgcagcagccgcca 661
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>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 107  aatcagagacaattaacacggatcggagggagt 139
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1585 aatcagcgacaattaatatggatcggagggagt 1553
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>emb|AL807389.7| Zebrafish DNA sequence from clone CH211-237L4 in linkage group 10
             Contains a novel gene similar to human KIAA0346, two novel
             genes, a novel gene similar to human and fugu PCOLCE
             (procollagen C-endopeptidase enhancer), the per1 gene for
             period homolog 1 (Drosophila), a novel gene similar to
             vertebrate VAMP2 (vesicle-associated membrane protein 2,
             synaptobrevin 2) and a novel gene similar to human and
             mouse AP4M1 (adaptor-related protein complex 4, mu 1
             subunit), complete sequence
          Length = 143672

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   taaatttacaagtcaaattaa 249
             |||||||||||||||||||||
Sbjct: 22864 taaatttacaagtcaaattaa 22884
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>emb|BX470099.5| Zebrafish DNA sequence from clone DKEY-14P11 in linkage group 23,
              complete sequence
          Length = 199831

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 229    taaatttacaagtcaaattaa 249
              |||||||||||||||||||||
Sbjct: 113430 taaatttacaagtcaaattaa 113450
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 84      aacaaggaaaagaaaaagaga 104
               |||||||||||||||||||||
Sbjct: 5764617 aacaaggaaaagaaaaagaga 5764637
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>dbj|AP008983.1| Bacteriophage c-st DNA, complete genome
          Length = 185683

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    aaatgcaacaaggaaaagaaa 98
             |||||||||||||||||||||
Sbjct: 99862 aaatgcaacaaggaaaagaaa 99842
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>emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 in linkage group 4,
             complete sequence
          Length = 190574

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   taaatttacaagtcaaattaa 249
             |||||||||||||||||||||
Sbjct: 57305 taaatttacaagtcaaattaa 57285
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>dbj|AB017065.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC16
          Length = 61290

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   caagtcaaattaaccggttgc 257
             |||||||||||||||||||||
Sbjct: 20371 caagtcaaattaaccggttgc 20351
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>gb|AC091681.44| Mus musculus strain C57BL/6J chromosome 10 clone rp23-111d4, complete
              sequence
          Length = 194809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 415    cctcccagcccgcagcagccg 435
              |||||||||||||||||||||
Sbjct: 108523 cctcccagcccgcagcagccg 108543
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>emb|X95524.1|MMUTROPRO M.musculus utrophin gene (promoter and exon 1)
          Length = 1514

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 415 cctcccagcccgcagcagccg 435
           |||||||||||||||||||||
Sbjct: 462 cctcccagcccgcagcagccg 442
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>gb|AY838876.1| Homo sapiens glycophorin C (Gerbich blood group) (GYPC) gene, complete
             cds
          Length = 45079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    acaaggaaaagaaaaagaga 104
             ||||||||||||||||||||
Sbjct: 22255 acaaggaaaagaaaaagaga 22274
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>gb|AC105982.10| Mus musculus chromosome 15, clone RP24-159I1, complete sequence
          Length = 168547

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    aaagaaaaagagagtaatcagaga 115
             ||||||||||| ||||||||||||
Sbjct: 44560 aaagaaaaagaaagtaatcagaga 44583
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>gb|BC034918.1| Homo sapiens chromosome 9 open reading frame 45, mRNA (cDNA clone
           MGC:45613 IMAGE:2989018), complete cds
          Length = 1949

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  aacaaggaaaagaaaaagag 103
           ||||||||||||||||||||
Sbjct: 20  aacaaggaaaagaaaaagag 1
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>gb|BC015678.2| Homo sapiens chromosome 9 open reading frame 45, mRNA (cDNA clone
            IMAGE:4652864)
          Length = 4021

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 2058 aacaaggaaaagaaaaagag 2039
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>gb|AC101757.12| Mus musculus chromosome 8, clone RP24-545I11, complete sequence
          Length = 148875

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    gcatctttgaaatgcagaaa 38
             ||||||||||||||||||||
Sbjct: 28337 gcatctttgaaatgcagaaa 28356
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>ref|XM_455957.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F19536g predicted mRNA
          Length = 3315

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 cagcagccgccaatggcacc 446
           ||||||||||||||||||||
Sbjct: 67  cagcagccgccaatggcacc 86
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>emb|CT009673.10| Zebrafish DNA sequence from clone CH73-334L20 in linkage group 19,
             complete sequence
          Length = 50891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 34675 aaatttacaagtcaaattaa 34656
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>emb|CR933765.9| Zebrafish DNA sequence from clone DKEY-215B24 in linkage group 14,
            complete sequence
          Length = 56046

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  aaatttacaagtcaaattaa 249
            ||||||||||||||||||||
Sbjct: 6742 aaatttacaagtcaaattaa 6761
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>emb|CR388416.6| Zebrafish DNA sequence from clone DKEY-165B20 in linkage group 14,
              complete sequence
          Length = 207245

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 117382 aaatttacaagtcaaattaa 117401
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>emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 in linkage group 24,
             complete sequence
          Length = 143425

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 97636 aaatttacaagtcaaattaa 97617
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>emb|CR361559.12| Zebrafish DNA sequence from clone DKEY-3P10 in linkage group 23,
             complete sequence
          Length = 246041

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 67032 aaatttacaagtcaaattaa 67051
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>emb|AL583860.7| Human DNA sequence from clone RP11-16P8 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 87845

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aaactgtagcacaaatttgc 295
             ||||||||||||||||||||
Sbjct: 50160 aaactgtagcacaaatttgc 50179
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>emb|AL365338.17| Human DNA sequence from clone RP11-123N4 on chromosome 9 Contain the 3'
             end of the gene for rab6 GTPase activating protein (GAP
             and centrosome-associated) (GAPCENA), a pseudogene similar
             to part of thyroid receptor interacting protein 15
             (TRIP15), the 3' end of the STRBP gene for spermatid
             perinuclear RNA binding protein (FLJ11307), a novel gene
             (GL012) and a CpG island, complete sequence
          Length = 150230

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aacaaggaaaagaaaaagag 103
             ||||||||||||||||||||
Sbjct: 56916 aacaaggaaaagaaaaagag 56935
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>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence
          Length = 161803

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaaggaaaagaaaaaga 102
              ||||||||||||||||||||
Sbjct: 144020 caacaaggaaaagaaaaaga 144039
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>emb|AL137140.12| Human DNA sequence from clone RP11-137M6 on chromosome 13q21.33-22.3
              Contains the SCEL gene for sciellin, a novel gene and a CpG
              island, complete sequence
          Length = 193098

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     tctttgaaatgcagaaattt 41
              ||||||||||||||||||||
Sbjct: 174899 tctttgaaatgcagaaattt 174918
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>emb|AL024474.1|HS91J24 Human DNA sequence from clone RP1-91J24 on chromosome 6q24 Contains a
             pseudogene similar to single-stranded DNA-binding protein,
             the 5' end of the UTRN gene for utrophin
             (dystrophin-related protein) (DRP, DRP1, DMDL) and a
             putative novel gene. Contains a CpG island, complete
             sequence
          Length = 95267

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   cctcccagcccgcagcagcc 434
             ||||||||||||||||||||
Sbjct: 29431 cctcccagcccgcagcagcc 29412
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>emb|CR383676.21| Zebrafish DNA sequence from clone CH211-276I12 in linkage group 14,
              complete sequence
          Length = 164241

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 138113 aaatttacaagtcaaattaa 138132
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>emb|BX046481.1|CNS09811 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20AF03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  aacaaggaaaagaaaaagag 103
           ||||||||||||||||||||
Sbjct: 591 aacaaggaaaagaaaaagag 572
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     cagcagccgccaatggcacc 446
               ||||||||||||||||||||
Sbjct: 1808329 cagcagccgccaatggcacc 1808348
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>emb|AL808129.8| Zebrafish DNA sequence from clone CH211-255F14 in linkage group 8
             Contains a novel gene for a protein similar to chicken and
             human RIM binding protein 2 (KIAA0318) and three CpG
             islands, complete sequence
          Length = 157330

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 74561 aaatttacaagtcaaattaa 74542
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>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14
          Length = 107947

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aacaaggaaaagaaaaagag 103
             ||||||||||||||||||||
Sbjct: 76514 aacaaggaaaagaaaaagag 76495
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>emb|CR376845.7| Zebrafish DNA sequence from clone CH211-244C8 in linkage group 10,
             complete sequence
          Length = 166564

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 10932 aaatttacaagtcaaattaa 10951
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>gb|AC007688.15| Homo sapiens 12 BAC RPCI11-392P7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161577

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    aatgtgaactgattcaatca 77
             ||||||||||||||||||||
Sbjct: 21818 aatgtgaactgattcaatca 21799
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>emb|BX571828.6| Zebrafish DNA sequence from clone DKEY-281I15 in linkage group 22,
             complete sequence
          Length = 212429

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 20063 aaatttacaagtcaaattaa 20082
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>emb|CR749230.1| Homo sapiens mRNA; cDNA DKFZp779O012 (from clone DKFZp779O012)
          Length = 6059

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 4073 aacaaggaaaagaaaaagag 4054
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>dbj|AK123844.1| Homo sapiens cDNA FLJ41850 fis, clone NT2RI3003738, highly  similar
            to Homo sapiens GL012 mRNA
          Length = 3709

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 1798 aacaaggaaaagaaaaagag 1779
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>gb|AC103581.10| Danio rerio strain AB clone busm1-144f12, complete sequence
          Length = 101943

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 29718 aaatttacaagtcaaattaa 29737
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>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete
             sequence
          Length = 83796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    acaaggaaaagaaaaagaga 104
             ||||||||||||||||||||
Sbjct: 31668 acaaggaaaagaaaaagaga 31649
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>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence
          Length = 102433

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   caattaacacggatcggagggagt 139
             |||||||| |||||||||||||||
Sbjct: 69098 caattaactcggatcggagggagt 69121
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>ref|NM_030814.4| Homo sapiens chromosome 9 open reading frame 45 (C9orf45), mRNA
          Length = 6059

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 4073 aacaaggaaaagaaaaagag 4054
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>emb|BX293993.10| Zebrafish DNA sequence from clone DKEYP-5G9, complete sequence
          Length = 173227

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 96626 aaatttacaagtcaaattaa 96607
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>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15, complete
              sequence
          Length = 152706

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 148156 aaatttacaagtcaaattaa 148175
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>emb|BX510996.12| Zebrafish DNA sequence from clone DKEYP-81E1 in linkage group 21,
             complete sequence
          Length = 197012

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 66485 aaatttacaagtcaaattaa 66466
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>emb|BX510369.6| Zebrafish DNA sequence from clone CH211-126I22 in linkage group 10,
             complete sequence
          Length = 168142

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 98671 aaatttacaagtcaaattaa 98690
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>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16,
              complete sequence
          Length = 256605

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     catctttgaaatgcagaaat 39
              ||||||||||||||||||||
Sbjct: 166643 catctttgaaatgcagaaat 166662
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>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16,
              complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     catctttgaaatgcagaaat 39
              ||||||||||||||||||||
Sbjct: 171677 catctttgaaatgcagaaat 171696
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>gb|AC159630.2| Mus musculus BAC clone RP24-173F2 from chromosome 12, complete sequence
          Length = 163528

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    aagaaaaagagagtaatcag 112
             ||||||||||||||||||||
Sbjct: 63007 aagaaaaagagagtaatcag 62988
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>dbj|AK032364.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430527E21
            product:unclassifiable, full insert sequence
          Length = 3955

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  cagaaaagagcctcaaatca 332
            ||||||||||||||||||||
Sbjct: 3173 cagaaaagagcctcaaatca 3192
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>ref|NM_001028668.1| Caenorhabditis elegans F25C8.3a (F25C8.3) mRNA, complete cds
          Length = 9555

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 77   aaaatgcaacaaggaaaagaaaaagaga 104
            ||||||||||| | ||||||||||||||
Sbjct: 4921 aaaatgcaacaggaaaaagaaaaagaga 4948
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>ref|NM_001028669.1| Caenorhabditis elegans F25C8.3b (F25C8.3) mRNA, complete cds
          Length = 9687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 77   aaaatgcaacaaggaaaagaaaaagaga 104
            ||||||||||| | ||||||||||||||
Sbjct: 4894 aaaatgcaacaggaaaaagaaaaagaga 4921
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>emb|BX511206.17| Zebrafish DNA sequence from clone CH211-122P23 in linkage group 18,
             complete sequence
          Length = 165585

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 58520 aaatttacaagtcaaattaa 58501
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>gb|AC013474.10| Homo sapiens BAC clone RP11-505O20 from 2, complete sequence
          Length = 198187

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     acaaggaaaagaaaaagaga 104
              ||||||||||||||||||||
Sbjct: 165727 acaaggaaaagaaaaagaga 165746
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>gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, complete sequence
          Length = 171477

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   aaccagaaaagagcctcaaa 329
             ||||||||||||||||||||
Sbjct: 66157 aaccagaaaagagcctcaaa 66176
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>emb|BX323990.6| Zebrafish DNA sequence from clone DKEYP-69B4 in linkage group 1,
             complete sequence
          Length = 199414

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 46946 aaatttacaagtcaaattaa 46927
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>gb|AC009511.16|AC009511 Homo sapiens 12 BAC RP11-860B13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60385

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    gaaaagaaaaagagagtaat 109
             ||||||||||||||||||||
Sbjct: 14558 gaaaagaaaaagagagtaat 14539
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>gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, complete sequence
          Length = 88404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaatgcaacaaggaaaagaa 97
             ||||||||||||||||||||
Sbjct: 79513 aaatgcaacaaggaaaagaa 79494
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>emb|BX648949.1|HSM809100 Homo sapiens mRNA; cDNA DKFZp686L1848 (from clone DKFZp686L1848)
          Length = 5655

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 3715 aacaaggaaaagaaaaagag 3696
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>dbj|AK025814.1| Homo sapiens cDNA: FLJ22161 fis, clone HRC00290
          Length = 3163

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaaggaaaagaaaaagag 103
            ||||||||||||||||||||
Sbjct: 1230 aacaaggaaaagaaaaagag 1211
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>emb|CR759867.5| Zebrafish DNA sequence from clone CH211-233F16 in linkage group 19,
             complete sequence
          Length = 177867

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 30455 aaatttacaagtcaaattaa 30436
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>emb|BX890548.9| Zebrafish DNA sequence from clone CH211-238E22 in linkage group 4,
            complete sequence
          Length = 155985

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  aaatttacaagtcaaattaa 249
            ||||||||||||||||||||
Sbjct: 4742 aaatttacaagtcaaattaa 4761
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>emb|BX323595.8| Zebrafish DNA sequence from clone CH211-155O21 in linkage group 20,
              complete sequence
          Length = 194459

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 133583 aaatttacaagtcaaattaa 133564
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>emb|BX284681.4| Zebrafish DNA sequence from clone DKEY-197D18 in linkage group 20,
             complete sequence
          Length = 96203

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 36088 aaatttacaagtcaaattaa 36069
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>gb|AC007172.6|AC007172 Homo sapiens chromosome 9, clone hRPK.538_E_7, complete sequence
          Length = 168535

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aacaaggaaaagaaaaagag 103
             ||||||||||||||||||||
Sbjct: 99996 aacaaggaaaagaaaaagag 99977
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>emb|Z81512.1|CEF25C8 Caenorhabditis elegans Cosmid F25C8, complete sequence
          Length = 40029

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    aaaatgcaacaaggaaaagaaaaagaga 104
             ||||||||||| | ||||||||||||||
Sbjct: 14762 aaaatgcaacaggaaaaagaaaaagaga 14789
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>emb|AL954661.10| Zebrafish DNA sequence from clone CH211-155C19 in linkage group 14,
             complete sequence
          Length = 65786

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 16622 aaatttacaagtcaaattaa 16641
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>gb|AC133181.2| Mus musculus BAC clone RP24-169F11 from 8, complete sequence
          Length = 140384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gcatctttgaaatgcagaaa 38
              ||||||||||||||||||||
Sbjct: 131720 gcatctttgaaatgcagaaa 131739
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>emb|CT010452.9| Mouse DNA sequence from clone RP23-424B20 on chromosome 12, complete
              sequence
          Length = 199987

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     aagaaaaagagagtaatcag 112
              ||||||||||||||||||||
Sbjct: 191586 aagaaaaagagagtaatcag 191605
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>emb|AL929130.4| Zebrafish DNA sequence from clone CH211-287M16 in linkage group 18,
              complete sequence
          Length = 149702

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 140950 aaatttacaagtcaaattaa 140931
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>emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, complete sequence
          Length = 170231

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aaatttacaagtcaaattaa 249
             ||||||||||||||||||||
Sbjct: 72622 aaatttacaagtcaaattaa 72641
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>emb|AL935292.5| Zebrafish DNA sequence from clone CH211-277P15, complete sequence
          Length = 145728

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    aaatttacaagtcaaattaa 249
              ||||||||||||||||||||
Sbjct: 103280 aaatttacaagtcaaattaa 103261
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>emb|X95523.1|HSUTROPRO H.sapiens utrophin gene (promoter DNA and exon 1)
          Length = 1655

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 415 cctcccagcccgcagcagcc 434
           ||||||||||||||||||||
Sbjct: 460 cctcccagcccgcagcagcc 441
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>emb|AL627406.15| Mouse DNA sequence from clone RP23-188A12 on chromosome 4, complete
             sequence
          Length = 155214

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cagaaaagagcctcaaatca 332
             ||||||||||||||||||||
Sbjct: 72121 cagaaaagagcctcaaatca 72140


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,924,690
Number of Sequences: 3902068
Number of extensions: 4924690
Number of successful extensions: 115866
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115684
Number of HSP's gapped (non-prelim): 182
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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