ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
3dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
4dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
5ref|XM_639146.1| Dictyostelium discoideum hypothetical protein (... 42 1.5
6gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, com... 42 1.5
7gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genom... 42 1.5
8gb|AC113475.12| Mus musculus chromosome 12, clone RP23-304B1, co... 42 1.5
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
10gb|AC113979.8| Mus musculus chromosome 12, clone RP23-478I20, co... 42 1.5
11gb|AF271358.1| Oryza sativa (indica cultivar-group) phospholipas... 42 1.5
12gb|L25598.1| Caenorhabditis elegans cosmid C06G4, complete sequence 42 1.5
13gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete s... 42 1.5
14emb|AL162418.17| Human DNA sequence from clone RP11-335H2 on chr... 42 1.5
15dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 42 1.5
16ref|NM_171886.2| Caenorhabditis elegans CaLPain family member (c... 42 1.5
17ref|NM_066339.3| Caenorhabditis elegans CaLPain family member (c... 42 1.5
18ref|NM_066340.3| Caenorhabditis elegans CaLPain family member (c... 42 1.5
19dbj|AK085840.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 42 1.5
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423... 42 1.5
22gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, com... 42 1.5
23dbj|AK069703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
24gb|AC121256.22| Mus musculus chromosome 1, clone RP24-576N23, co... 42 1.5
25gb|AC073597.20| Homo sapiens Xp BAC RP11-793P1 (Roswell Park Can... 42 1.5
26gb|AC166248.20| Mus musculus BAC RP23-311A8 (Roswell Park Cance... 40 5.9
27ref|XM_639792.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
28ref|XM_635475.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
29ref|XM_631434.1| Dictyostelium discoideum hypothetical protein (... 40 5.9
30gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, co... 40 5.9
31gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome ... 40 5.9
32gb|BC051671.1| Mus musculus prolactin-like protein E, mRNA (cDNA... 40 5.9
33gb|AY333760.1| Salmonella enterica subsp. enterica serovar Typhi... 40 5.9
34gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 40 5.9
35gb|AC124600.5| Mus musculus BAC clone RP23-25H7 from chromosome ... 40 5.9
36gb|AY488172.1| Capsicum annuum Ran protein/TC4 protein mRNA, com... 40 5.9
37emb|Z48621.1|CER07B1 Caenorhabditis elegans Cosmid R07B1, comple... 40 5.9
38emb|BX539321.14| Zebrafish DNA sequence from clone CH211-223F3 i... 40 5.9
39gb|AC055872.23| Homo sapiens chromosome 17, clone RP11-636N17, c... 40 5.9
40ref|NM_008930.1| Mus musculus prolactin-like protein E (Prlpe), ... 40 5.9
41gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete seq... 40 5.9
42emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chr... 40 5.9
43gb|AY318757.1| Oryza sativa (indica cultivar-group) cohesin-like... 40 5.9
44emb|AL031320.6|HS20N2 Human DNA sequence from clone RP1-20N2 on ... 40 5.9
45emb|X99945.1|STPYKFORF S.typhimurium ORF's 32 & 48 & gene pykF 40 5.9
46gb|AE008760.1| Salmonella typhimurium LT2, section 64 of 220 of ... 40 5.9
47emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, stra... 40 5.9
48gb|AC158904.4| Mus musculus chromosome 19, clone RP23-16C24, com... 40 5.9
49emb|AL627271.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 5.9
50emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chro... 40 5.9
51emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in ... 40 5.9
52gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, co... 40 5.9
53gb|AC110056.5| Homo sapiens chromosome 11, clone CTD-2063L20, co... 40 5.9
54gb|AC104040.3| Homo sapiens chromosome 8, clone CTD-2023L15, com... 40 5.9
55dbj|AK146050.1| Mus musculus 11 days pregnant adult female place... 40 5.9
56dbj|AK141309.1| Mus musculus 7 days embryo whole body cDNA, RIKE... 40 5.9
57gb|AC013476.9| Homo sapiens BAC clone RP11-525G12 from 2, comple... 40 5.9
58gb|AC090349.7| Homo sapiens chromosome 18, clone RP11-844N22, co... 40 5.9
59ref|XM_685600.1| PREDICTED: Danio rerio similar to MxG protein (... 40 5.9
60gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, comple... 40 5.9
61dbj|AK049770.1| Mus musculus 12 days embryo spinal cord cDNA, RI... 40 5.9
62dbj|AK028371.1| Mus musculus 18 days pregnant adult female place... 40 5.9
63gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074... 40 5.9
64gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, co... 40 5.9
65gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, co... 40 5.9
66gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, com... 40 5.9
67gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 5.9
68gb|AC154743.2| Mus musculus BAC clone RP24-392N10 from 13, compl... 40 5.9
69emb|BX936311.12| Zebrafish DNA sequence from clone DKEY-53B10 in... 40 5.9
70emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in... 40 5.9
71gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 40 5.9
72gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 5.9
73gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, c... 40 5.9
74dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 5.9
75dbj|AP003172.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.9
76emb|BX537633.1|HSM806421 Homo sapiens mRNA; cDNA DKFZp686J08208 ... 40 5.9
77gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.24... 40 5.9
78emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, c... 40 5.9
79gb|AF011381.1|AF011381 Mus musculus placental PRL-like protein E... 40 5.9
80emb|CT025552.9| Mouse DNA sequence from clone RP24-270A4 on chro... 40 5.9
81gb|AF020525.1|AF020525 Mus musculus prolactin-like protein G pre... 40 5.9
82emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chro... 40 5.9
83emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chr... 40 5.9
84gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome... 40 5.9
85dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco... 40 5.9 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 410      ttcttcgccgtcggtgcggcgacggc 435
                ||||||||||||||||||||| ||||
Sbjct: 15862264 ttcttcgccgtcggtgcggcggcggc 15862239
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 163      tcctcttcctcttctcctgcca 184
                ||||||||||||||||||||||
Sbjct: 27633778 tcctcttcctcttctcctgcca 27633757
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>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0778G11
          Length = 59211

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 163   tcctcttcctcttctcctgcca 184
             ||||||||||||||||||||||
Sbjct: 37961 tcctcttcctcttctcctgcca 37940
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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 410   ttcttcgccgtcggtgcggcgacggc 435
             ||||||||||||||||||||| ||||
Sbjct: 25390 ttcttcgccgtcggtgcggcggcggc 25365
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>ref|XM_639146.1| Dictyostelium discoideum hypothetical protein (DDB0167594), partial
           mRNA
          Length = 1158

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 259 tcaaagttcatcatcatcatc 279
           |||||||||||||||||||||
Sbjct: 45  tcaaagttcatcatcatcatc 65
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>gb|AC111143.10| Mus musculus chromosome 3, clone RP23-372C7, complete sequence
          Length = 147125

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   attcctcttcctcttctcctg 181
             |||||||||||||||||||||
Sbjct: 56288 attcctcttcctcttctcctg 56308
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>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete
             sequence
          Length = 130272

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   ttcctcttcctcttctcctgc 182
             |||||||||||||||||||||
Sbjct: 51824 ttcctcttcctcttctcctgc 51844
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>gb|AC113475.12| Mus musculus chromosome 12, clone RP23-304B1, complete sequence
          Length = 177032

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    caaagttcatcatcatcatca 280
              |||||||||||||||||||||
Sbjct: 168308 caaagttcatcatcatcatca 168288
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 162      ttcctcttcctcttctcctgc 182
                |||||||||||||||||||||
Sbjct: 35050923 ttcctcttcctcttctcctgc 35050943
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>gb|AC113979.8| Mus musculus chromosome 12, clone RP23-478I20, complete sequence
          Length = 172842

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    caaagttcatcatcatcatca 280
              |||||||||||||||||||||
Sbjct: 134941 caaagttcatcatcatcatca 134961
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>gb|AF271358.1| Oryza sativa (indica cultivar-group) phospholipase D (RPLD5) gene,
            complete cds
          Length = 6300

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 162  ttcctcttcctcttctcctgc 182
            |||||||||||||||||||||
Sbjct: 1358 ttcctcttcctcttctcctgc 1338
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>gb|L25598.1| Caenorhabditis elegans cosmid C06G4, complete sequence
          Length = 29122

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  agttcatcatcatcatcagga 283
            |||||||||||||||||||||
Sbjct: 8097 agttcatcatcatcatcagga 8077
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>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   caaagttcatcatcatcatca 280
             |||||||||||||||||||||
Sbjct: 18048 caaagttcatcatcatcatca 18028
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>emb|AL162418.17| Human DNA sequence from clone RP11-335H2 on chromosome 9 Contains part
             of the gene for a novel protein similar to basonuclin
             (BNC) (FLJ34928) and a LSM1 homolog, U6 small nuclear RNA
             associated (S. cerevisiae) pseudogene, complete sequence
          Length = 57850

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   cctgccagacaaaatcttatt 198
             |||||||||||||||||||||
Sbjct: 23427 cctgccagacaaaatcttatt 23447
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 394    gctggccaatgtgcctttctt 414
              |||||||||||||||||||||
Sbjct: 205895 gctggccaatgtgcctttctt 205915
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>ref|NM_171886.2| Caenorhabditis elegans CaLPain family member (clp-1) (clp-1) mRNA,
            complete cds
          Length = 2562

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  agttcatcatcatcatcagga 283
            |||||||||||||||||||||
Sbjct: 1967 agttcatcatcatcatcagga 1947
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>ref|NM_066339.3| Caenorhabditis elegans CaLPain family member (clp-1) (clp-1) mRNA,
            complete cds
          Length = 2570

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  agttcatcatcatcatcagga 283
            |||||||||||||||||||||
Sbjct: 1987 agttcatcatcatcatcagga 1967
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>ref|NM_066340.3| Caenorhabditis elegans CaLPain family member (clp-1) (clp-1) mRNA,
            complete cds
          Length = 2445

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 263  agttcatcatcatcatcagga 283
            |||||||||||||||||||||
Sbjct: 2132 agttcatcatcatcatcagga 2112
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>dbj|AK085840.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830015N20 product:unclassifiable, full
           insert sequence
          Length = 3711

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 161 attcctcttcctcttctcctg 181
           |||||||||||||||||||||
Sbjct: 127 attcctcttcctcttctcctg 147
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 162      ttcctcttcctcttctcctgc 182
                |||||||||||||||||||||
Sbjct: 35140995 ttcctcttcctcttctcctgc 35141015
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>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4,
              complete sequence
          Length = 266544

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 259    tcaaagttcatcatcatcatc 279
              |||||||||||||||||||||
Sbjct: 225179 tcaaagttcatcatcatcatc 225159
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>gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, complete sequence
          Length = 233171

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   gaattcctcttcctcttctcc 179
             |||||||||||||||||||||
Sbjct: 92044 gaattcctcttcctcttctcc 92064
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>dbj|AK069703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027C22, full
           insert sequence
          Length = 2733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 162 ttcctcttcctcttctcctgc 182
           |||||||||||||||||||||
Sbjct: 90  ttcctcttcctcttctcctgc 70
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>gb|AC121256.22| Mus musculus chromosome 1, clone RP24-576N23, complete sequence
          Length = 182551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    gaattcctcttcctcttctcc 179
              |||||||||||||||||||||
Sbjct: 179081 gaattcctcttcctcttctcc 179061
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>gb|AC073597.20| Homo sapiens Xp BAC RP11-793P1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 120000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 162    ttcctcttcctcttctcctgccaga 186
              ||||| |||||||||||||||||||
Sbjct: 100950 ttccttttcctcttctcctgccaga 100926
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>gb|AC166248.20| Mus musculus  BAC RP23-311A8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 182636

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 124    taattagttcttatccacttccta 147
              ||||||||||||| ||||||||||
Sbjct: 170806 taattagttcttacccacttccta 170783
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>ref|XM_639792.1| Dictyostelium discoideum hypothetical protein (DDB0168905), partial
            mRNA
          Length = 13482

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  aaagttcatcatcatcatca 280
            ||||||||||||||||||||
Sbjct: 2003 aaagttcatcatcatcatca 2022
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>ref|XM_635475.1| Dictyostelium discoideum hypothetical protein (DDB0204595), partial
           mRNA
          Length = 1422

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 aaagttcatcatcatcatca 280
           ||||||||||||||||||||
Sbjct: 662 aaagttcatcatcatcatca 681
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>ref|XM_631434.1| Dictyostelium discoideum hypothetical protein (DDB0188114), partial
            mRNA
          Length = 1683

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  aaagttcatcatcatcatca 280
            ||||||||||||||||||||
Sbjct: 1139 aaagttcatcatcatcatca 1158
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>gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, complete sequence
          Length = 173506

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    ttcctcttcctcttctcctg 181
              ||||||||||||||||||||
Sbjct: 105419 ttcctcttcctcttctcctg 105438
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>gb|AC115301.7| Mus musculus BAC clone RP24-83E2 from chromosome 7, complete sequence
          Length = 175603

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   ttcctcttcctcttctcctg 181
             ||||||||||||||||||||
Sbjct: 62889 ttcctcttcctcttctcctg 62870
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>gb|BC051671.1| Mus musculus prolactin-like protein E, mRNA (cDNA clone MGC:60663
           IMAGE:30018275), complete cds
          Length = 959

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 277 aagttcatcatcatcatcag 296
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>gb|AY333760.1| Salmonella enterica subsp. enterica serovar Typhimurium Lpp1 (lpp1)
            and Lpp2 (lpp2) genes, complete cds
          Length = 3897

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 363  gaaccagctcgccggagaccatca 386
            |||||||| |||||||||||||||
Sbjct: 1255 gaaccagcgcgccggagaccatca 1232
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>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    taattagttcttatccacttccta 147
              ||||||||||||| ||||||||||
Sbjct: 209893 taattagttcttacccacttccta 209916
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>gb|AC124600.5| Mus musculus BAC clone RP23-25H7 from chromosome 16, complete sequence
          Length = 225102

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    gagatcatcacagatatatc 230
              ||||||||||||||||||||
Sbjct: 121124 gagatcatcacagatatatc 121143
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>gb|AY488172.1| Capsicum annuum Ran protein/TC4 protein mRNA, complete cds
          Length = 748

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 ttcatcatcatcatcaggaa 284
           ||||||||||||||||||||
Sbjct: 664 ttcatcatcatcatcaggaa 645
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>emb|Z48621.1|CER07B1 Caenorhabditis elegans Cosmid R07B1, complete sequence
          Length = 44209

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  aagttcatcatcatcatcag 281
            ||||||||||||||||||||
Sbjct: 2703 aagttcatcatcatcatcag 2722
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>emb|BX539321.14| Zebrafish DNA sequence from clone CH211-223F3 in linkage group 9,
              complete sequence
          Length = 180633

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aaagttcatcatcatcatca 280
              ||||||||||||||||||||
Sbjct: 143779 aaagttcatcatcatcatca 143798
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>gb|AC055872.23| Homo sapiens chromosome 17, clone RP11-636N17, complete sequence
          Length = 202360

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   cctcttcctcttctcctgcc 183
             ||||||||||||||||||||
Sbjct: 10037 cctcttcctcttctcctgcc 10056
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>ref|NM_008930.1| Mus musculus prolactin-like protein E (Prlpe), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 284 aagttcatcatcatcatcag 303
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>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
          Length = 129204

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tcaaagttcatcatcatcat 278
             ||||||||||||||||||||
Sbjct: 27898 tcaaagttcatcatcatcat 27917
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>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 152898

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcatcatcatcatcaggaat 285
             ||||||||||||||||||||
Sbjct: 78888 tcatcatcatcatcaggaat 78869
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>gb|AY318757.1| Oryza sativa (indica cultivar-group) cohesin-like protein mRNA,
            complete cds
          Length = 3230

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  atcatcatcatcaggaatgc 287
            ||||||||||||||||||||
Sbjct: 1749 atcatcatcatcaggaatgc 1730
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>emb|AL031320.6|HS20N2 Human DNA sequence from clone RP1-20N2 on chromosome 6q24 Contains the
              gene for a novel protein similar to yeast and bacterial
              cytosine deaminase, a novel protein similar to tubulin beta
              polypeptide 4 member Q (TUBB4Q) (probably a pseudogene),
              the PEX3 gene for peroxisomal biogenesis factor 3 (peroxin
              3), a VDAC1 (voltage-dependent anion channel 1
              (Plasmalemmal porin)) pseudogene, the gene for a novel
              protein similar to tissue fucosidase alpha-L-1, a novel
              gene and two CpG islands, complete sequence
          Length = 133574

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     gaacatatctgaatacaaga 45
              ||||||||||||||||||||
Sbjct: 116377 gaacatatctgaatacaaga 116358
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>emb|X99945.1|STPYKFORF S.typhimurium ORF's 32 & 48 & gene pykF
          Length = 4631

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 363  gaaccagctcgccggagaccatca 386
            |||||||| |||||||||||||||
Sbjct: 4290 gaaccagcgcgccggagaccatca 4267
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>gb|AE008760.1| Salmonella typhimurium LT2, section 64 of 220 of the complete genome
          Length = 21723

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 363  gaaccagctcgccggagaccatca 386
            |||||||| |||||||||||||||
Sbjct: 7899 gaaccagcgcgccggagaccatca 7922
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>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11
          Length = 307337

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    tgccactgctgatgagatca 217
              ||||||||||||||||||||
Sbjct: 259863 tgccactgctgatgagatca 259882
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>gb|AC158904.4| Mus musculus chromosome 19, clone RP23-16C24, complete sequence
          Length = 219567

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    tggccaatgtgcctttcttc 415
              ||||||||||||||||||||
Sbjct: 194523 tggccaatgtgcctttcttc 194542
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>emb|AL627271.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 7/20
          Length = 233050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 363   gaaccagctcgccggagaccatca 386
             |||||||| |||||||||||||||
Sbjct: 93483 gaaccagcgcgccggagaccatca 93460
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>emb|AL590522.7| Mouse DNA sequence from clone RP23-117C5 on chromosome 13 Contains the
              Prlpc2, Prlpe and Prlpf genes for prolactin-like proteins
              C2 (1600019F10RIK, Prlpc beta), E (Prlpg) and F (Plp-f),
              and genes 1600032B14RIK, 1600017L04RIK (3830403L08RIK) and
              1600014J19RIK for novel proteins similar to prolactin,
              complete sequence
          Length = 211776

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    aagttcatcatcatcatcag 281
              ||||||||||||||||||||
Sbjct: 168063 aagttcatcatcatcatcag 168044
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>emb|BX530077.4| Zebrafish DNA sequence from clone CH211-22D5 in linkage group 21,
             complete sequence
          Length = 200625

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ttcctaaatacatttctgaa 161
             ||||||||||||||||||||
Sbjct: 49783 ttcctaaatacatttctgaa 49764
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>gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, complete sequence
          Length = 160686

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 147   aaatacatttctgaattcctcttcctct 174
             ||||||||||||||||||| | ||||||
Sbjct: 13002 aaatacatttctgaattccccatcctct 13029
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>gb|AC110056.5| Homo sapiens chromosome 11, clone CTD-2063L20, complete sequence
          Length = 74874

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 147   aaatacatttctgaattcctcttcctct 174
             ||||||||||||||||||| | ||||||
Sbjct: 49426 aaatacatttctgaattccccatcctct 49399
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>gb|AC104040.3| Homo sapiens chromosome 8, clone CTD-2023L15, complete sequence
          Length = 136646

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   aatcaaagttcatcatcatcatca 280
             ||||| ||||||||||||||||||
Sbjct: 62492 aatcacagttcatcatcatcatca 62469
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>dbj|AK146050.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530026M05
           product:prolactin-like protein E, full insert sequence
          Length = 952

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 296 aagttcatcatcatcatcag 315
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>dbj|AK141309.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:C430026D01
           product:prolactin-like protein E, full insert sequence
          Length = 916

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 296 aagttcatcatcatcatcag 315
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>gb|AC013476.9| Homo sapiens BAC clone RP11-525G12 from 2, complete sequence
          Length = 142305

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 266   tcatcatcatcatcaggaatgctc 289
             ||||||||||||||||| ||||||
Sbjct: 96238 tcatcatcatcatcagggatgctc 96261
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>gb|AC090349.7| Homo sapiens chromosome 18, clone RP11-844N22, complete sequence
          Length = 132191

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   catttctgaattcctcttcc 171
             ||||||||||||||||||||
Sbjct: 20903 catttctgaattcctcttcc 20884
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>ref|XM_685600.1| PREDICTED: Danio rerio similar to MxG protein (LOC562203), partial
           mRNA
          Length = 1693

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 ctgatgagatcatcacagat 225
           ||||||||||||||||||||
Sbjct: 437 ctgatgagatcatcacagat 418
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>gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, complete sequence
          Length = 168680

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ttcctcttcctcttctcctg 181
              ||||||||||||||||||||
Sbjct: 142046 ttcctcttcctcttctcctg 142027



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ttcctcttcctcttctcctg 181
              ||||||||||||||||||||
Sbjct: 128494 ttcctcttcctcttctcctg 128475
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>dbj|AK049770.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
           enriched library, clone:C530047L02 product:weakly
           similar to HYPOTHETICAL 51.9 KDA PROTEIN [Macaca
           fascicularis], full insert sequence
          Length = 2205

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 336 tggaaccccaagcaacactgcaga 359
           |||||||||| |||||||||||||
Sbjct: 84  tggaaccccaggcaacactgcaga 61
to top
>dbj|AK028371.1| Mus musculus 18 days pregnant adult female placenta and extra
           embryonic tissue cDNA, RIKEN full-length enriched
           library, clone:3830429G09 product:prolactin-like protein
           E, full insert sequence
          Length = 1284

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 293 aagttcatcatcatcatcag 312
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>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4,
             complete sequence
          Length = 182871

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   aaagttcatcatcatcatca 280
             ||||||||||||||||||||
Sbjct: 58874 aaagttcatcatcatcatca 58893
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>gb|AC087625.12| Homo sapiens chromosome 8, clone RP11-525O22, complete sequence
          Length = 166763

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   aattcctcttcctcttctcctgcc 183
             ||||||||||||||||| ||||||
Sbjct: 23150 aattcctcttcctcttcccctgcc 23173
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>gb|AC140936.1| Gallus gallus chromosome UNK clone TAM31-90P6, complete sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ctctcttactgctggaatac 313
             ||||||||||||||||||||
Sbjct: 13549 ctctcttactgctggaatac 13530
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>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence
          Length = 160835

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   aattcctcttcctcttctcctgcc 183
             ||||||||||||||||| ||||||
Sbjct: 39305 aattcctcttcctcttcccctgcc 39282
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 363     gaaccagctcgccggagaccatca 386
               |||||||| |||||||||||||||
Sbjct: 1552329 gaaccagcgcgccggagaccatca 1552306
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>gb|AC154743.2| Mus musculus BAC clone RP24-392N10 from 13, complete sequence
          Length = 141272

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 162   ttcctcttcctcttctcctgccag 185
             ||||||| ||||||||||||||||
Sbjct: 69456 ttcctctccctcttctcctgccag 69433
to top
>emb|BX936311.12| Zebrafish DNA sequence from clone DKEY-53B10 in linkage group 22,
             complete sequence
          Length = 100387

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   aaagttcatcatcatcatca 280
             ||||||||||||||||||||
Sbjct: 22392 aaagttcatcatcatcatca 22373
to top
>emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in linkage group 4,
             complete sequence
          Length = 166156

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   cttcctaaatacatttctga 160
             ||||||||||||||||||||
Sbjct: 34293 cttcctaaatacatttctga 34274
to top
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 363     gaaccagctcgccggagaccatca 386
               |||||||| |||||||||||||||
Sbjct: 1314648 gaaccagcgcgccggagaccatca 1314671
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 363     gaaccagctcgccggagaccatca 386
               |||||||| |||||||||||||||
Sbjct: 1497711 gaaccagcgcgccggagaccatca 1497734
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>gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, complete sequence
          Length = 227173

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    tggccaatgtgcctttcttc 415
              ||||||||||||||||||||
Sbjct: 102001 tggccaatgtgcctttcttc 101982
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>dbj|AP006303.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-285B2, complete
             sequence
          Length = 167054

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   aattcctcttcctcttctcctgcc 183
             ||||||||||||||||| ||||||
Sbjct: 67537 aattcctcttcctcttcccctgcc 67560
to top
>dbj|AP003172.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822D3, complete
             sequences
          Length = 33994

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ctgaattcctcttcctcttc 176
             ||||||||||||||||||||
Sbjct: 27228 ctgaattcctcttcctcttc 27209
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>emb|BX537633.1|HSM806421 Homo sapiens mRNA; cDNA DKFZp686J08208 (from clone DKFZp686J08208)
          Length = 2770

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   gaacatatctgaatacaaga 45
            ||||||||||||||||||||
Sbjct: 1476 gaacatatctgaatacaaga 1495
to top
>gb|AC005668.1|AC005668 Homo sapiens chromosome 17, clone hRPK.243_K_12, complete sequence
          Length = 152355

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    cctcttcctcttctcctgcc 183
              ||||||||||||||||||||
Sbjct: 143911 cctcttcctcttctcctgcc 143930
to top
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence
          Length = 176982

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   aaagttcatcatcatcatca 280
             ||||||||||||||||||||
Sbjct: 58954 aaagttcatcatcatcatca 58973
to top
>gb|AF011381.1|AF011381 Mus musculus placental PRL-like protein E (PLP-E) mRNA, complete
           cds
          Length = 933

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 284 aagttcatcatcatcatcag 303
to top
>emb|CT025552.9| Mouse DNA sequence from clone RP24-270A4 on chromosome 13, complete
              sequence
          Length = 206266

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    ttcctcttcctcttctcctgccag 185
              ||||||| ||||||||||||||||
Sbjct: 145717 ttcctctccctcttctcctgccag 145740
to top
>gb|AF020525.1|AF020525 Mus musculus prolactin-like protein G precursor, mRNA, complete cds
          Length = 942

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 aagttcatcatcatcatcag 281
           ||||||||||||||||||||
Sbjct: 266 aagttcatcatcatcatcag 285
to top
>emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chromosome 2, complete
             sequence
          Length = 167210

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tattgccactgctgatgaga 214
             ||||||||||||||||||||
Sbjct: 30717 tattgccactgctgatgaga 30698
to top
>emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chromosome 2, complete
              sequence
          Length = 180748

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 289    cttccctctcttactgctgg 308
              ||||||||||||||||||||
Sbjct: 147311 cttccctctcttactgctgg 147292
to top
>gb|AC144795.5| Mus musculus BAC clone RP24-374I3 from chromosome 6, complete sequence
          Length = 184775

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   taattagttcttatccacttccta 147
             ||||||||||||| ||||||||||
Sbjct: 18943 taattagttcttacccacttccta 18966
to top
>dbj|AB020866.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 9/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 160   aattcctcttcctcttctcctgcc 183
             ||||||||||||||||| ||||||
Sbjct: 45886 aattcctcttcctcttcccctgcc 45909


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,202,658
Number of Sequences: 3902068
Number of extensions: 5202658
Number of successful extensions: 273233
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 272626
Number of HSP's gapped (non-prelim): 607
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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