ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl32h08 |
|---|---|
| Clone Library Name | barley_pub |
>E2F_DROME (Q27368) Transcription factor E2f (dE2F)| Length = 805 Score = 34.7 bits (78), Expect = 0.11 Identities = 26/82 (31%), Positives = 35/82 (42%) Frame = +2 Query: 173 HTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTPTNRQ*SSGTVQRPQ 352 H+H Q + + A E ++ AKP++H + PQ QQL SSG R Sbjct: 200 HSHHQLRHDADAELDEDVVERVAKPASHHPFS--LSTPQ-QQLAASVASSSSSGDRNRAD 256 Query: 353 TAGRIA*SKLEDRLQYPPSAEV 418 T+ I K D LQ P V Sbjct: 257 TSLGILTKKFVDLLQESPDGVV 278
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 34.3 bits (77), Expect = 0.15 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 1/120 (0%) Frame = +2 Query: 65 PAKVRYIYNCYYKATKATPNSIQSASTTASDI-SLPAHTHEQRNNPSQASTQESFLQEQA 241 P++ + Y + ++ P +QS+ S S P H PSQ ST + Q Q Sbjct: 490 PSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQP 549 Query: 242 KPSTHQRIAPRREMPQLQQLPTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSAEVS 421 S Q +P ++ Q P+ ++Q PQ + + + ++PP E+S Sbjct: 550 PYSQPQAQSPYQQQQPQQPAPSTLSQQ-----AAYPQPQSQQSQQTAYSQQRFPPPQELS 604
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 33.5 bits (75), Expect = 0.25 Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 11/115 (9%) Frame = +2 Query: 101 KATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI----- 265 K T+A P Q D S +H Q ++P + Q+ A P QR Sbjct: 413 KMTQALPRQPQR------DASPGRGSHSQSSSPGALTLGRQTSQQPAGPPAQQRPPPQGG 466 Query: 266 ------APRREMPQLQQLPTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSA 412 P+R+ P LQQ P P +Q SG G A S L RL P +A Sbjct: 467 PPQPGPGPQRQGPPLQQRPPPQGQQHLSG-------LGPPAGSPLPQRLPSPTAA 514
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 32.7 bits (73), Expect = 0.43 Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 11/96 (11%) Frame = +2 Query: 155 DISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI-----------APRREMPQLQQL 301 D S +H Q +P Q+ A P QR P+R+ P LQQ Sbjct: 425 DASPGRGSHSQTPSPGALPLGRQISQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR 484 Query: 302 PTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPS 409 PTP +Q SG G A S L RL P S Sbjct: 485 PTPQGQQHLSG-------LGPPAGSPLPQRLPSPTS 513
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 32.3 bits (72), Expect = 0.56 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +2 Query: 110 KATPNS-IQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMP 286 K P S +S S + + P+HT +R + S++ + + +PS +R +PRR P Sbjct: 273 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP----RRRPSPRRRPSPRRRTP 328 Query: 287 QLQQLPTPTNRQ*SSGTVQRPQTAGRIA 370 + P P +R+ S +R +++ ++ Sbjct: 329 PRRMPPPPRHRRSRSPVRRRRRSSASLS 356
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 32.3 bits (72), Expect = 0.56 Identities = 16/33 (48%), Positives = 17/33 (51%) Frame = -1 Query: 440 AAPSGPLTPPRTAGTGAGPRASTRRSGQPSVVS 342 AAP P PP+T G G ASTRR S S Sbjct: 336 AAPGKPPAPPQTGGPAPGRNASTRRRSSSSSAS 368
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 32.3 bits (72), Expect = 0.56 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +2 Query: 110 KATPNS-IQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMP 286 K P S +S S + + P+HT +R + S++ + + +PS +R +PRR P Sbjct: 273 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP----RRRPSPRRRPSPRRRTP 328 Query: 287 QLQQLPTPTNRQ*SSGTVQRPQTAGRIA 370 + P P +R+ S +R +++ ++ Sbjct: 329 PRRMPPPPRHRRSRSPVRRRRRSSASLS 356
>ANCA_CLOTM (Q06848) Cellulosome-anchoring protein precursor| Length = 447 Score = 31.6 bits (70), Expect = 0.95 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -1 Query: 443 SAAPSGPLTPPRTAGTGAGPRASTRRSGQPS 351 ++AP TP TAG+GAG + SGQPS Sbjct: 175 ASAPEATPTPGSTAGSGAGGGTGSSGSGQPS 205
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 31.6 bits (70), Expect = 0.95 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +2 Query: 110 KATPNS-IQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMP 286 K P S +S S + + P+HT +R + S++ + + +PS +R +PRR P Sbjct: 271 KTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP----RRRPSPRRRPSPRRRTP 326 Query: 287 QLQQLPTPTNRQ*SSGTVQRPQTAGRIA 370 + P P +R+ S +R +++ ++ Sbjct: 327 PRRMPPPPRHRRSRSPGRRRRRSSASLS 354
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 31.6 bits (70), Expect = 0.95 Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 11/108 (10%) Frame = +2 Query: 122 NSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI-----------A 268 N + A D S +H Q +P Q+ A P QR Sbjct: 412 NKMTQALPRQRDASPGRGSHSQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPG 471 Query: 269 PRREMPQLQQLPTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSA 412 P+R+ P LQQ P P +Q SG G A S L RL P +A Sbjct: 472 PQRQGPPLQQRPPPQGQQHLSG-------LGPPAGSPLPQRLPSPTAA 512
>HCN1_MOUSE (O88704) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 (Brain cyclic nucleotide gated channel 1) (BCNG-1) (Hyperpolarization-activated cation channel 2) (HAC-2) Length = 910 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/75 (29%), Positives = 34/75 (45%) Frame = +2 Query: 137 ASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTPTN 316 AS TAS +SL +Q Q+ Q++ Q Q + Q+ +++ Q QQ Sbjct: 709 ASPTASQLSLMQQPQQQL---PQSQVQQTQTQTQQQQQQQQQQQQQQQQQQQQQQQQQQQ 765 Query: 317 RQ*SSGTVQRPQTAG 361 +Q Q+PQT G Sbjct: 766 QQQQQQQQQQPQTPG 780
>CDC16_YEAST (P09798) Anaphase-promoting complex subunit CDC16 (Cell division| control protein 16) Length = 840 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/74 (29%), Positives = 32/74 (43%) Frame = +2 Query: 95 YYKATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPR 274 YYK++KAT N S + P+ H Q N+ AS F+ + T Q + Sbjct: 21 YYKSSKATSNLKSSNRVLMRNPMSPSEQHSQHNSTLAAS---PFVSNVSAARTQQSLPTD 77 Query: 275 REMPQLQQLPTPTN 316 + +LQQ TN Sbjct: 78 AQNDRLQQPWNRTN 91
>UL11_HCMVA (P16721) Protein UL11 precursor| Length = 275 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/67 (22%), Positives = 32/67 (47%) Frame = +2 Query: 107 TKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMP 286 TK T + + +TT + + + TH + +NP +++T ++ ++ P + P Sbjct: 164 TKKTTTTSTTTTTTTTKKTTTSTTHHRHSNPKESTTPKTHVELHVGLGATAAETPLQPSP 223 Query: 287 QLQQLPT 307 Q Q + T Sbjct: 224 QYQHVAT 230
>STP2_MOUSE (P11378) Nuclear transition protein 2 (TP-2) (TP2)| Length = 117 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 190 EQPKPSLHSRILPTRASQAKHPPKNR 267 + PKPS+HSR P R S PKNR Sbjct: 60 KHPKPSVHSRHSPARPSHRGSCPKNR 85
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 30.4 bits (67), Expect = 2.1 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 10/113 (8%) Frame = +2 Query: 107 TKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMP 286 T +P+ +A+ T + +S P Q+ P A+ S L Q +P+ AP +P Sbjct: 519 TTPSPSPTAAAAPTTTTLSPPP---TQQQPPQSAAPAPSPLLPQQQPTPSAAPAPSPLLP 575 Query: 287 QLQQLPT--------PTNRQ*SSGTVQRPQTAGRIA*S--KLEDRLQYPPSAE 415 Q Q P+ P +Q P A ++ S LE +PP+A+ Sbjct: 576 QQQPPPSAARAPSPLPPQQQPLPSATPAPPPAQQLPPSATTLEPEKNHPPAAD 628
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/80 (23%), Positives = 40/80 (50%) Frame = +2 Query: 131 QSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTP 310 +S S + S P+H+ +R + S++ + +PS +R +PRR P + P P Sbjct: 282 RSKSRSRSRSRSPSHSRPRRRHRSRS---------RRRPSPRRRPSPRRRTPPRRMPPPP 332 Query: 311 TNRQ*SSGTVQRPQTAGRIA 370 +R+ S +R +++ ++ Sbjct: 333 RHRRSRSPVRRRRRSSASLS 352
>DPEP2_MOUSE (Q8C255) Dipeptidase 2 precursor (EC 3.4.13.19) (Membrane-bound| dipeptidase 2) (MBD-2) Length = 478 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = +1 Query: 163 SPCTHT*AEEQPKPSLHSRILPTRASQAKHPPKNRTQTRDASTAAITHSNQSAIIV 330 SP EEQ + HS + P Q +HP KN+ +T + +HS S IV Sbjct: 413 SPLEDMIPEEQLDSACHSALRP----QKQHPEKNQPETPEYHILKFSHSKSSPHIV 464
>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)| Length = 705 Score = 30.4 bits (67), Expect = 2.1 Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 11/97 (11%) Frame = +2 Query: 155 DISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI-----------APRREMPQLQQL 301 D S +H Q +P Q+ A P QR P+R+ P LQQ Sbjct: 425 DASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR 484 Query: 302 PTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSA 412 P P +Q SG G A S L RL P SA Sbjct: 485 PPPQGQQHLSG-------LGPPAGSPLPQRLPSPTSA 514
>MUTS_SILPO (Q5LWH0) DNA mismatch repair protein mutS| Length = 877 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 Query: 201 AKPPLKNPSYKSKPSQAPTKESHPD 275 A PPL P+ K+ P+ A KE HPD Sbjct: 834 AAPPLPPPAPKTSPADAMLKEIHPD 858
>HCN1_RAT (Q9JKB0) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 Length = 910 Score = 30.4 bits (67), Expect = 2.1 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 4/79 (5%) Frame = +2 Query: 137 ASTTASDISLPAHTHEQ----RNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLP 304 AS TAS +SL Q + +Q TQ+ Q+Q +P Q P+++ Q QQ Sbjct: 709 ASPTASQLSLMQQPQPQLQQSQVQQTQTQTQQQQQQQQPQPQPQQ---PQQQQQQQQQQQ 765 Query: 305 TPTNRQ*SSGTVQRPQTAG 361 +Q Q+PQT G Sbjct: 766 QQQQQQ----QQQQPQTPG 780
>BOC_HUMAN (Q9BWV1) Brother of CDO precursor (Protein BOC)| Length = 1114 Score = 30.0 bits (66), Expect = 2.8 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Frame = +2 Query: 101 KATKATPNSIQSASTTASDI-------SLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQ 259 K + P +Q S T+S + +H+ P + + SFL STHQ Sbjct: 951 KPQQHCPGELQQQSDTSSLLRQTHLGNGYDPQSHQITRGPKSSPDEGSFLYTLPDDSTHQ 1010 Query: 260 RIAPRREMPQLQQLPTPTNRQ*SSGTVQRPQT 355 + P + Q Q+ P + SG + P + Sbjct: 1011 LLQPHHDCCQRQEQPAAVGQ---SGVRRAPDS 1039
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%) Frame = +2 Query: 101 KATKATPNSIQSASTTAS-----DISLPAHTHEQRNNPSQASTQESFLQEQAKPST 253 K T A P+ +Q+ + S ++ PA + +NPS A S L KPST Sbjct: 358 KVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPST 413
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 30.0 bits (66), Expect = 2.8 Identities = 29/97 (29%), Positives = 36/97 (37%), Gaps = 11/97 (11%) Frame = +2 Query: 155 DISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI-----------APRREMPQLQQL 301 D S +H Q +P Q+ + P QR P+R+ P LQQ Sbjct: 153 DASPGRGSHSQTPSPGALPLGRQTSQQPSGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQR 212 Query: 302 PTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSA 412 P P +Q SG G A S L RL P SA Sbjct: 213 PPPQGQQHLSG-------LGPPAGSPLPQRLPSPTSA 242
>CN092_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1| Length = 619 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = +2 Query: 104 ATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREM 283 AT T +Q T+ + I Q + +Q +T+ A ++ Q PR + Sbjct: 392 ATVVTSRGLQLGQTSTATI--------QPSQQAQIATRSVLQAAAAAAASMQLPPPRLQP 443 Query: 284 PQLQQLPTPTNRQ 322 P LQQ+P P +Q Sbjct: 444 PPLQQMPQPPTQQ 456
>TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylammeline| chlorohydrolase) Length = 476 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Frame = +2 Query: 197 PSQASTQESFLQEQAKPSTHQRIAPRREMP------QLQQLPTPTNRQ*SSGTVQRPQTA 358 P ++ F+ + P+T AP+ P PTPT+ + SSG V P TA Sbjct: 22 PGTVVVEDQFIAQVGSPTTSTSAAPKSSTPPGWQCSPASSTPTPTSHKSSSGVV-HPMTA 80
>FP1_MYTED (Q25460) Adhesive plaque matrix protein (Polyphenolic adhesive| protein) (Foot protein 1) (MEFP1) (Fragment) Length = 875 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 192 TTQAKPPLKNPSYKSKPSQAPTKESHP--DARCLNCSNYPLQP 314 T +AKP P+YK+KPS PT ++ P A+ N S Y +P Sbjct: 660 TYKAKPSYP-PTYKAKPSYPPTYKAKPTYKAKPTNPSTYKAKP 701
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 30.0 bits (66), Expect = 2.8 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 7/113 (6%) Frame = +2 Query: 131 QSASTTASDISLPAHTHEQRNNPSQASTQE-------SFLQEQAKPSTHQRIAPRREMPQ 289 Q S S LP ++ PSQ Q +Q A P + P+ ++PQ Sbjct: 952 QGISLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQ 1011 Query: 290 LQQLPTPTNRQ*SSGTVQRPQTAGRIA*SKLEDRLQYPPSAEVSAVRSVLHCD 448 QQ P P+ Q Q+ Q + + ++ P S V R L+ D Sbjct: 1012 QQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPD 1064
>XKR6_HUMAN (Q5GH73) XK-related protein 6| Length = 641 Score = 29.6 bits (65), Expect = 3.6 Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 7/79 (8%) Frame = -1 Query: 446 RSAAPSG---PLTPPRTAGTGAGPRASTRRSGQPSVVSVQFLTIIADWLE--WVIAAVEA 282 RSAA G PL PP G G P + +P V+ WL+ W++ A+ Sbjct: 84 RSAAADGGDQPLQPPAAPGAGRQPPTPSAARPEPPPPQVE-----RPWLDCLWIVLAL-- 136 Query: 281 SRVWVRFFG--GCLAWLAL 231 + FFG G WLAL Sbjct: 137 ----LVFFGDVGTDLWLAL 151
>H11_VOLCA (Q08864) Histone H1-I| Length = 260 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 201 AKPPLKNPSYKSKPSQAPTKESHPDAR 281 AKP PS K+ P +AP K+S P A+ Sbjct: 226 AKPKKATPSKKAAPKKAPAKKSTPKAK 252
>FP1_MYTGA (Q27409) Adhesive plaque matrix protein precursor (Foot protein 1)| (MGFP1) (MGFP-1) Length = 751 Score = 29.6 bits (65), Expect = 3.6 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = +3 Query: 192 TTQAKPPLKNPSYKSKPSQAPTKESHPDARCLNCSNYPLQP 314 T +AKP P+YK+KPS PT ++ P S Y +P Sbjct: 628 TYKAKPSYP-PTYKAKPSYPPTYKAKPSYPATYPSTYKAKP 667
>ATP7A_HUMAN (Q04656) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein) Length = 1500 Score = 29.6 bits (65), Expect = 3.6 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = +2 Query: 98 YKATKATPNSIQSASTTASD----ISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRI 265 Y A+ TP S++ A S +S+ + N+PS +S Q+ L ++P T + + Sbjct: 321 YNASSVTPESLRKAIEAVSPGLYRVSITSEVESTSNSPSSSSLQKIPLNVVSQPLTQETV 380
>PO21_POPJA (Q03273) Retrovirus-related Pol polyprotein from type-1| retrotransposable element R2 (Retrovirus-related Pol polyprotein from type I retrotransposable element R2) [Includes: Reverse transcriptase (EC 2.7.7.49); Endonuclease] (Fragment) Length = 445 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/47 (29%), Positives = 22/47 (46%) Frame = +2 Query: 167 PAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPT 307 PAH H+ R QA+ LQ +H R +R++ Q+ P+ Sbjct: 383 PAHHHQPRPPEGQATANTGTLQSGRPALSHSRKKRKRQLTPTQRAPS 429
>RPOD_PSEPU (P52327) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 614 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 131 QSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQ 289 +S + A I +P H E N ++ S Q LQE + T + + R EMP+ Sbjct: 442 RSIADQARTIRIPVHMIETINKLNRISRQ--MLQEMGREPTPEELGERMEMPE 492
>RPOD_PSEFL (P52326) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 615 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 131 QSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQ 289 +S + A I +P H E N ++ S Q LQE + T + + R EMP+ Sbjct: 443 RSIADQARTIRIPVHMIETINKLNRISRQ--MLQEMGREPTPEELGERMEMPE 493
>AMELY_BOVIN (Q99004) Amelogenin, Y isoform precursor (Class II amelogenin)| Length = 192 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 179 HEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLP 304 H Q N P A Q+SF + +P HQ + P+ + +Q+LP Sbjct: 115 HHQPNLPLPA--QQSFQPQPIQPQPHQPLQPQPPVHPIQRLP 154
>GLTA_WHEAT (P10385) Glutenin, low molecular weight subunit precursor| Length = 356 Score = 29.3 bits (64), Expect = 4.7 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = +2 Query: 98 YKATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQR-IAPR 274 Y + P S Q + P T +Q+ Q Q+ F Q+Q P + Q I+ + Sbjct: 109 YSQQQQPPFSQQQQPPFSQQQQQPPFTQQQQ----QQQQQQPFTQQQQPPFSQQPPISQQ 164 Query: 275 REMPQLQQLPTPTNRQ 322 ++ P LQQ P +RQ Sbjct: 165 QQPPFLQQQRPPFSRQ 180
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +2 Query: 182 EQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQ 298 +Q P Q Q+ Q+Q +P HQ++ ++ Q+QQ Sbjct: 126 QQNQPPQQNQQQQHHQQQQQQPQHHQQMQQQQHHQQMQQ 164
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = +2 Query: 185 QRNNPSQASTQESFLQEQAKPSTHQRI---APRREMPQLQQLPTPTNRQ*SSGTVQRPQ 352 Q+ SQ Q+ Q+Q +P Q++ P+++ PQ QQ+ TP Q Q+PQ Sbjct: 1348 QQQVVSQQQQQQHQPQQQQQPQQQQQLQQQQPQQQQPQHQQVQTPQPAQ------QQPQ 1400
>CN092_MOUSE (Q8BU11) Epidermal Langerhans cell protein LCP1| Length = 619 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +2 Query: 104 ATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREM 283 AT T +Q T+ + I Q + +Q T+ A ++ Q PR + Sbjct: 392 ATVVTSRGLQVGQTSTATI--------QPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQP 443 Query: 284 PQLQQLPTPTNRQ 322 P LQQ+P P +Q Sbjct: 444 PPLQQMPQPPTQQ 456
>PIMT_PSEPK (Q88MF0) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 212 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -1 Query: 431 SGPLTPPRTAGTGAGPRASTRRSGQPSVVSVQFLTIIADWLEWVIAAVEASRVWVRFFGG 252 +GPL GTG+G + + V SV+ + ++ D + + + V R+ G Sbjct: 75 AGPLDKVLEIGTGSGYQTAILAQLVERVFSVERIKVLQDRAKERLVELNLRNVVFRWGDG 134 Query: 251 CLAWLAL 231 C W AL Sbjct: 135 CEGWPAL 141
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Frame = +2 Query: 173 HTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREM-----PQLQQLPTP 310 H H Q+ Q Q+ Q+Q + HQ P ++ PQ QQ PTP Sbjct: 132 HHHHQQQQQQQQQQQQ---QQQQQQQQHQNQPPSQQQQQQSTPQHQQQPTP 179
>NUDH_NITWN (Q3SVH3) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 170 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -1 Query: 359 QPSVVSVQFLTIIADWLEWVIAAVEASRVWV-RFFGGCLAWLAL 231 + SV S++ L I DWL + I V A R W R+ G W A+ Sbjct: 65 ETSVRSIEKLAEIPDWLTYDIPRVVAGRAWKGRYRGQRQKWYAV 108
>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)| (HMSH) Length = 281 Score = 28.9 bits (63), Expect = 6.2 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Frame = -1 Query: 431 SGPLTPPRTAGTGAGPRASTRRSGQPSVVSVQFLTIIAD-------WLEWVIAAVEA--- 282 SGP +PP G G+ + TRR P ++ + AD W+E I ++A Sbjct: 38 SGPASPPGPTGAGSFRSSQTRRVIAPDMLGFGYSERPADGKYSQARWVEHAIGVLDALGI 97 Query: 281 --SRVWVRFFGGCLAWLALVGR 222 + FGG LA LAL R Sbjct: 98 QQGDIVGNSFGGGLA-LALAIR 118
>SNX41_EMENI (Q5AZC9) Sorting nexin-41| Length = 615 Score = 28.9 bits (63), Expect = 6.2 Identities = 25/92 (27%), Positives = 40/92 (43%) Frame = +2 Query: 95 YYKATKATPNSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPR 274 Y T + Q + +T+S S T E R + + ++ +S P TH + Sbjct: 433 YLNRTSPQAPTKQRSLSTSSATSSQGGTDESRPSGEETASIDSDF-----PPTHAEHVSQ 487 Query: 275 REMPQLQQLPTPTNRQ*SSGTVQRPQTAGRIA 370 R P+ Q P +R+ SSGT + GRI+ Sbjct: 488 R-YPESGQTSPPAHRKTSSGTFVANKIFGRIS 518
>GDA4_WHEAT (P04724) Alpha/beta-gliadin A-IV precursor (Prolamin)| Length = 297 Score = 28.9 bits (63), Expect = 6.2 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +2 Query: 128 IQSASTTASDISLPAHTHEQRNNPSQASTQES--FLQEQAKPSTHQRIAPRREMPQLQQL 301 + + +T A + +P Q NPSQ Q+ +Q+Q P Q P++ PQ Q Sbjct: 13 VATTATIAVRVPVP---QLQPQNPSQQQPQKQVPLVQQQQFPGQQQPFPPQQPYPQQQPF 69 Query: 302 PT 307 P+ Sbjct: 70 PS 71
>RPOD_HAEIN (P43766) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 629 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 131 QSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQ 289 +S + A I +P H E N ++ S Q LQE + +T + +A R MP+ Sbjct: 457 RSIADQARTIRIPVHMIETINKLNRISRQ--LLQEMGREATPEELAERMGMPE 507
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 28.5 bits (62), Expect = 8.1 Identities = 34/124 (27%), Positives = 42/124 (33%), Gaps = 10/124 (8%) Frame = +1 Query: 88 QLLLQSYKXXXXXXXXXXXXXXRHLSPCTHT*AEEQPKPSLHSRILPTRA-SQAKHPPKN 264 +LL Q + SPC E PSL R P+RA S+ PP + Sbjct: 1024 ELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTVPEYSAPSLPIR--PSRAPSRTPGPPSS 1081 Query: 265 RTQTRDASTAAITHSNQSAIIVRNCTETTDGWPDRLVE---------ARGPAPVPAVRGG 417 + D AA S+Q+ R P R AR PAP GG Sbjct: 1082 QGSPVDTQPAAQKDSSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARKEFGG 1141 Query: 418 VSGP 429 V P Sbjct: 1142 VGAP 1145
>PSIP1_HUMAN (O75475) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcriptional coactivator p75/p52) (Dense fine speckles 70 kDa protein) (DFS 70) (CLL-associated antigen KW-7) Length = 530 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 143 TTASDISLP--AHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTPTN 316 T A DI+ P A +R Q T+E+ + A S + +++P+R P ++ P Sbjct: 134 TKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATEVKIPKP 193 Query: 317 R 319 R Sbjct: 194 R 194
>PSIP1_FELCA (Q66T72) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Transcription coactivator p75) (LEDGF/p75) Length = 530 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 143 TTASDISLP--AHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTPTN 316 T A DI+ P A +R Q T+E+ + A S + +++P+R P ++ P Sbjct: 134 TKAIDITTPKAARRGRKRKAEKQVETEEAGVVTTAAASVNLKVSPKRGRPAATEVKIPKP 193 Query: 317 R 319 R Sbjct: 194 R 194
>PSIP1_BOVIN (Q8MJG1) PC4 and SFRS1-interacting protein (Lens epithelium-derived| growth factor) (Fragment) Length = 483 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 143 TTASDISLP--AHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQLPTPTN 316 T A DI+ P A +R Q T+E+ + A S + +++P+R P ++ P Sbjct: 87 TKAIDITTPKAARRGRKRKAEKQVETEEAGVVTTATASANLKVSPKRGRPAATEVKIPKP 146 Query: 317 R 319 R Sbjct: 147 R 147
>FXR1_DROME (Q9NFU0) Fragile X mental retardation syndrome-related protein 1| (dFMR1) (dfxr) Length = 684 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/66 (25%), Positives = 29/66 (43%) Frame = +2 Query: 122 NSIQSASTTASDISLPAHTHEQRNNPSQASTQESFLQEQAKPSTHQRIAPRREMPQLQQL 301 +S++ A + +S Q+NN ++T + KP + Q+ PQ QQ Sbjct: 532 SSVERADSNSSYEGSSRRRRRQKNNNGPSNTNGAVANNNNKPQSAQQ-------PQQQQP 584 Query: 302 PTPTNR 319 P P N+ Sbjct: 585 PAPGNK 590
>SMG5_MOUSE (Q6ZPY2) Protein SMG5 (SMG-5 homolog) (EST1-like protein B)| Length = 1017 Score = 28.5 bits (62), Expect = 8.1 Identities = 20/70 (28%), Positives = 31/70 (44%) Frame = +1 Query: 184 AEEQPKPSLHSRILPTRASQAKHPPKNRTQTRDASTAAITHSNQSAIIVRNCTETTDGWP 363 A+E K HSR+ R + HPPK D S + + S+ ++ +D Sbjct: 443 ADEGRKSRKHSRLSCLRRRRRHHPPK----AGDDSDLSEGFESDSSHDSAQASDGSDSGS 498 Query: 364 DRLVEARGPA 393 D+ +E RG A Sbjct: 499 DKSLEGRGTA 508
>ARMX2_HUMAN (Q7L311) Armadillo repeat-containing X-linked protein 2 (Protein| ALEX2) (ARM protein lost in epithelial cancers on chromosome X 2) Length = 632 Score = 28.5 bits (62), Expect = 8.1 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 14/96 (14%) Frame = +1 Query: 196 PKPSLHSRILPTRASQAKHPPKNRTQTRDAST--AAITHSNQSAIIVRNCTETTDG---- 357 P P + + A PK R+A T AA+ TE T+G Sbjct: 141 PPPGVTEALGAAEAPAMAGAPKVAEAPREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVA 200 Query: 358 WPDRLVEARG--------PAPVPAVRGGVSGPLGAA 441 P ++ EA G APVPA G + P GAA Sbjct: 201 APTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAA 236
>VU47_HHV6U (Q06093) Glycoprotein U47 precursor| Length = 651 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 164 LPAHTHEQRNNPSQASTQESFLQEQAKPS 250 L AHT E+ P ++ T E+FL +KP+ Sbjct: 557 LNAHTSEKSTTPQRSFTAETFLTTSSKPN 585
>VU47_HHV6G (P30005) Glycoprotein U47 precursor| Length = 651 Score = 28.5 bits (62), Expect = 8.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 164 LPAHTHEQRNNPSQASTQESFLQEQAKPS 250 L AHT E+ P ++ T E+FL +KP+ Sbjct: 557 LNAHTSEKSTTPQRSFTAETFLTTSSKPA 585
>LBR_HUMAN (Q14739) Lamin-B receptor (Integral nuclear envelope inner membrane| protein) (LMN2R) Length = 615 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +2 Query: 179 HEQRNNPSQASTQESFL--QEQAKPSTHQRIAPRREMPQLQQL 301 H +RN+ +TQE F QE + +T + PRRE +L+++ Sbjct: 138 HIERNDAPHKNTQEKFSLSQESSYIATQYSLRPRREEVKLKEI 180
>ACHA4_MOUSE (O70174) Neuronal acetylcholine receptor protein, alpha-4 subunit| precursor Length = 629 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 Query: 195 TQAKPPLKNPSYKSKPSQAPTKESHPDARCLNCSNYPLQPI 317 T++KP S K++PSQ P + +C P+ PI Sbjct: 505 TESKPTGSPASLKTRPSQLPVSDQTSPCKCTCKEPSPVSPI 545 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,820,545 Number of Sequences: 219361 Number of extensions: 1150221 Number of successful extensions: 5694 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 5055 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5636 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
