>CK002_HUMAN (Q9UID3) Protein C11orf2 (Another new gene 2 protein)|
          Length = 782

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
 Frame = +1

Query: 25  VSFLFYKLQIMIPAQKQLQKGGRKGERKQPRLKKAKREAYLQ*TGHLPKFRGL---C-YF 192
           V  L  KLQ +     +L K    G   Q    + + +A LQ   HLP FR +   C   
Sbjct: 170 VHALLRKLQFLFELPSRLTKCVELGAYGQAVRYQGRAQAVLQQYQHLPSFRAIQDDCQVI 229

Query: 193 SKQLAKMLRCSLRHG 237
           + +LA+ LR   R G
Sbjct: 230 TARLAQQLRQRFREG 244

>PHF13_MOUSE (Q8K2W6) PHD finger protein 13|
          Length = 296

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = +3

Query: 6   FSQQNRRFLSVLQTSNY----DPSSKAVTKGRPKRREKTAKTEEGQKRSIFTVNRASPQI 173
           FS      L   + SNY      + K   K R KRR+     +EG + S+  +  A P +
Sbjct: 86  FSHLQPSLLQRAKPSNYLLDRKTTDKLKKKKRRKRRDSDIPVKEGFRESLLKLEAADPYV 145

Query: 174 QGP 182
           + P
Sbjct: 146 ETP 148

>CAPS2_HUMAN (Q86UW7) Calcium-dependent secretion activator 2 (Calcium-dependent|
           activator protein for secretion 2) (CAPS-2)
          Length = 1296

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +3

Query: 21  RRFLSVLQTSNYDPSSKAVTKGRPKRREKTAKTEEGQKRSIFTVNRASPQ--IQGPLLFF 194
           +R+  ++Q S Y       T      REK ++ +E  +   +TV+   P   +QG  +FF
Sbjct: 507 KRYFVLVQVSQY-------TFAMCSYREKKSEPQELMQLEGYTVDYTDPHPGLQGGCMFF 559

Query: 195 KTISENATLQSAS 233
             + E  T+  AS
Sbjct: 560 NAVKEGDTVIFAS 572

>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 80  KREAEKERENSQD*RRPKEKHIYSEPGISPNSGAS 184
           +++ +KERE  +  RR +EKH ++ P    +S  S
Sbjct: 50  RKKHKKEREKKKSKRRKREKHKHNSPSSDDSSDYS 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,146,605
Number of Sequences: 219361
Number of extensions: 646897
Number of successful extensions: 2230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2221
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)