ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466019.1| Oryza sativa (japonica cultivar-group), mRNA 78 2e-11
2gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA bindin... 78 2e-11
3gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA bindin... 78 2e-11
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
5dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
6dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
7dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
8dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
9gb|BT016256.1| Zea mays clone Contig89 mRNA sequence 62 1e-06
10gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Ca... 44 0.34
11emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 i... 44 0.34
12gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, com... 42 1.3
13gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, com... 42 1.3
14emb|AL391221.15| Human DNA sequence from clone RP11-771D21 on ch... 42 1.3
15emb|AL031660.16|HS387E22 Human DNA sequence from clone RP3-387E2... 42 1.3
16emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence 42 1.3
17emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chro... 42 1.3
18ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 ... 40 5.3
19gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete se... 40 5.3
20gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map... 40 5.3
21gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet... 40 5.3
22emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chr... 40 5.3
23emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on ch... 40 5.3
24emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chr... 40 5.3
25emb|AL096768.7|HSJ858B16 Human DNA sequence from clone RP5-858B1... 40 5.3
26gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence 40 5.3
27emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 40 5.3
28gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromo... 40 5.3
29gb|AC163750.4| Pan troglodytes BAC clone CH251-295N9 from chromo... 40 5.3
30gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl... 40 5.3
31gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome ... 40 5.3
32gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12... 40 5.3
33gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence 40 5.3
34emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 5.3
35emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Co... 40 5.3
36gb|AC115625.3| Homo sapiens BAC clone RP11-588E23 from 2, comple... 40 5.3
37gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, comple... 40 5.3
38gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, comple... 40 5.3
39gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 5.3
40gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I1... 40 5.3
41gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete ... 40 5.3
42dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.3
43dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.3
44gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 5.3
45gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 5.3 
>ref|XM_466019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3549

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3153 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3094

                   
Query: 386  ccttctt 392
            |||||||
Sbjct: 3093 ccttctt 3087



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 129  ttattgagcttaggggaaaaacaatgtat 157
            ||||| || ||||||||||||||||||||
Sbjct: 3443 ttattaagtttaggggaaaaacaatgtat 3415
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>gb|AY320037.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            gene, complete cds
          Length = 5478

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 5271 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 5212

                   
Query: 386  ccttctt 392
            |||||||
Sbjct: 5211 ccttctt 5205
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>gb|AY320036.1| Oryza sativa (japonica cultivar-group) RNA binding protein Rp120
            mRNA, complete cds
          Length = 2961

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 2932 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 2873

                   
Query: 386  ccttctt 392
            |||||||
Sbjct: 2872 ccttctt 2866
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                            
Query: 326      ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
                |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 19118661 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 19118720

                       
Query: 386      ccttctt 392
                |||||||
Sbjct: 19118721 ccttctt 19118727



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 129      ttattgagcttaggggaaaaacaatgtat 157
                ||||| || ||||||||||||||||||||
Sbjct: 19118371 ttattaagtttaggggaaaaacaatgtat 19118399
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0415B12
          Length = 157419

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 326   ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
             |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 16910 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 16969

                    
Query: 386   ccttctt 392
             |||||||
Sbjct: 16970 ccttctt 16976



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 129   ttattgagcttaggggaaaaacaatgtat 157
             ||||| || ||||||||||||||||||||
Sbjct: 16620 ttattaagtttaggggaaaaacaatgtat 16648
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                          
Query: 326    ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
              |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 124182 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 124241

                     
Query: 386    ccttctt 392
              |||||||
Sbjct: 124242 ccttctt 124248



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 129    ttattgagcttaggggaaaaacaatgtat 157
              ||||| || ||||||||||||||||||||
Sbjct: 123892 ttattaagtttaggggaaaaacaatgtat 123920
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>dbj|AK065061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J15, full
            insert sequence
          Length = 3547

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 3151 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 3092

                   
Query: 386  ccttctt 392
            |||||||
Sbjct: 3091 ccttctt 3085



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 129  ttattgagcttaggggaaaaacaatgtat 157
            ||||| || ||||||||||||||||||||
Sbjct: 3441 ttattaagtttaggggaaaaacaatgtat 3413
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>dbj|AK063159.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D08, full
            insert sequence
          Length = 1551

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 326  ctggagcttgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagccttt 385
            |||||||||||||||||||||| |||||||| || ||||||||||| |   |||||||||
Sbjct: 1169 ctggagcttgctcttcctcgtcagattcaacatcaccatactgccagatctgcagccttt 1110

                   
Query: 386  ccttctt 392
            |||||||
Sbjct: 1109 ccttctt 1103



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 129  ttattgagcttaggggaaaaacaatgtat 157
            ||||| || ||||||||||||||||||||
Sbjct: 1459 ttattaagtttaggggaaaaacaatgtat 1431
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>gb|BT016256.1| Zea mays clone Contig89 mRNA sequence
          Length = 1657

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 334  tgctcttcctcgtcggattcaacgtctccatactgccacaggcgcagcctttccttctt 392
            ||||| |||||||| |||||||| ||||| |||||||| |  |||||||||||||||||
Sbjct: 1350 tgctcgtcctcgtccgattcaacatctccgtactgccaaatccgcagcctttccttctt 1292
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>gb|AC092827.8| Homo sapiens 12p BAC RP11-186N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 117636

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 146   aaaacaatgtatatagttctct 167
             ||||||||||||||||||||||
Sbjct: 97578 aaaacaatgtatatagttctct 97599
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>emb|AL772362.8| Zebrafish DNA sequence from clone CH211-173K16 in linkage group 13,
              complete sequence
          Length = 165993

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 210    ttcatataagctctcgactgagtttc 235
              |||||||| |||||||||||||||||
Sbjct: 151331 ttcatatatgctctcgactgagtttc 151306
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>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence
          Length = 275646

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 129    ttattgagcttaggggaaaaa 149
              |||||||||||||||||||||
Sbjct: 246866 ttattgagcttaggggaaaaa 246886
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>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence
          Length = 257203

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   ttattgagcttaggggaaaaa 149
             |||||||||||||||||||||
Sbjct: 88447 ttattgagcttaggggaaaaa 88467
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>emb|AL391221.15| Human DNA sequence from clone RP11-771D21 on chromosome 6 Contains the 5'
              end of the PKHD1 gene for polycystic kidney and hepatic
              disease 1 (autosomal recessive) (TIG multiple domains-1,
              FCYT, ARPKD), a novel gene and the IL17 gene for
              interleukin 17 (cytotoxic T-lymphocyte-associated serine
              esterase 8) (CTLA8), complete sequence
          Length = 152546

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     ctgcctctacaaagaaaaaac 105
              |||||||||||||||||||||
Sbjct: 102414 ctgcctctacaaagaaaaaac 102394
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>emb|AL031660.16|HS387E22 Human DNA sequence from clone RP3-387E22 on chromosome 20q11.23-12
             Contains STSs and GSSs, complete sequence
          Length = 49838

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    tctgcctctacaaagaaaaaa 104
             |||||||||||||||||||||
Sbjct: 37739 tctgcctctacaaagaaaaaa 37759
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>emb|BX629357.1|CNS09SBV Tetraodon nigroviridis BAC sequence
          Length = 168910

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 197    ttcttactaagttttcatata 217
              |||||||||||||||||||||
Sbjct: 141218 ttcttactaagttttcatata 141198
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>emb|AL671881.8| Mouse DNA sequence from clone RP23-206E1 on chromosome X, complete
              sequence
          Length = 195413

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    gtccacaaaggacacagacct 129
              |||||||||||||||||||||
Sbjct: 152418 gtccacaaaggacacagacct 152438
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>ref|NM_102108.2| Arabidopsis thaliana unknown protein AT1G22610 mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 337 tcttcctcgtcggattcaacgtctccat 364
           ||||| ||||||| ||||||||||||||
Sbjct: 755 tcttcttcgtcggcttcaacgtctccat 728
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>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence
          Length = 51685

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   gaaaaacaatgtatatagttctct 167
             |||||||||| |||||||||||||
Sbjct: 28326 gaaaaacaatatatatagttctct 28303
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>gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map human ortholog p22.12
             complete sequence
          Length = 215862

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ctgcctctacaaagaaaaaa 104
             ||||||||||||||||||||
Sbjct: 35799 ctgcctctacaaagaaaaaa 35818
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>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   atatagttctcttcttctaatggc 179
             |||| |||||||||||||||||||
Sbjct: 99542 atatggttctcttcttctaatggc 99565
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>emb|AL732366.7| Human DNA sequence from clone RP11-393H10 on chromosome X Contains a
              novel gene (FLJ14503), the EIF1A gene for eukaryotic
              translation initiation factor 1A (EIF4C, EIF1AX, eIF-1A,
              eIF-4C), the 3' end of the RPS6KA3 gene for ribosomal
              protein S6 kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3,
              RSK2, MRX19, ISPK-1, MAPKAPK1B), a novel gene and three CpG
              islands, complete sequence
          Length = 187275

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     ctgcctctacaaagaaaaaa 104
              ||||||||||||||||||||
Sbjct: 133267 ctgcctctacaaagaaaaaa 133286



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ctgcctctacaaagaaaaaa 104
             ||||||||||||||||||||
Sbjct: 45343 ctgcctctacaaagaaaaaa 45324
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>emb|AL354711.24| Human DNA sequence from clone RP11-340N12 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ25636) and the 5' end of a novel
              gene (FLJ20276), complete sequence
          Length = 162126

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 33     ttccaatcctgaatttaatttcca 56
              |||||||||||||||| |||||||
Sbjct: 145724 ttccaatcctgaatttcatttcca 145701
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>emb|AL139000.9| Human DNA sequence from clone RP11-173M10 on chromosome 13q14.3-21.31,
              complete sequence
          Length = 157028

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aaagaaaaaacgcagtccac 114
              ||||||||||||||||||||
Sbjct: 147075 aaagaaaaaacgcagtccac 147094
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>emb|AL096768.7|HSJ858B16 Human DNA sequence from clone RP5-858B16 on chromosome 22 Contains the
             3' end of the gene for homolog of yeast Sfi1 (SFI1), the
             3' end of the PISD gene for Phosphatidylserine
             decarboxylase and a CpG isalnd, complete sequence
          Length = 36676

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tgcctctacaaagaaaaaac 105
             ||||||||||||||||||||
Sbjct: 36345 tgcctctacaaagaaaaaac 36326
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>gb|AY080693.1| Arabidopsis thaliana At1g22610 mRNA sequence
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 337 tcttcctcgtcggattcaacgtctccat 364
           ||||| ||||||| ||||||||||||||
Sbjct: 746 tcttcttcgtcggcttcaacgtctccat 719
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>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    ataaatatagtctctctttc 199
              ||||||||||||||||||||
Sbjct: 181778 ataaatatagtctctctttc 181797
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>gb|AC161624.4| Pan troglodytes BAC clone CH251-149E7 from chromosome unknown, complete
              sequence
          Length = 180132

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     tgcctctacaaagaaaaaac 105
              ||||||||||||||||||||
Sbjct: 152391 tgcctctacaaagaaaaaac 152372
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>gb|AC163750.4| Pan troglodytes BAC clone CH251-295N9 from chromosome unknown, complete
              sequence
          Length = 182445

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     tgcctctacaaagaaaaaac 105
              ||||||||||||||||||||
Sbjct: 147477 tgcctctacaaagaaaaaac 147496
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>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   tgtatatagttctcttcttc 172
             ||||||||||||||||||||
Sbjct: 87138 tgtatatagttctcttcttc 87157
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>gb|AC079389.2| Rattus norvegicus strain Brown Norway chromosome 6 clone RP31-263K14,
             complete sequence
          Length = 151836

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aaaacaatgtatatagttct 165
             ||||||||||||||||||||
Sbjct: 34730 aaaacaatgtatatagttct 34711
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>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete
             sequence
          Length = 107200

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 337   tcttcctcgtcggattcaacgtctccat 364
             ||||| ||||||| ||||||||||||||
Sbjct: 12990 tcttcttcgtcggcttcaacgtctccat 13017
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>gb|AF115319.1|AF115319 Mus musculus Ucp2 gene, promoter sequence
          Length = 7342

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 156  atatagttctcttcttctaatggc 179
            |||| |||||||||||||||||||
Sbjct: 3933 atatggttctcttcttctaatggc 3910
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>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   ataaatatagtctctctttc 199
             ||||||||||||||||||||
Sbjct: 88307 ataaatatagtctctctttc 88326
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>emb|BX815537.1|CNS0AEKP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS70ZB10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2808

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 337 tcttcctcgtcggattcaacgtctccat 364
           ||||| ||||||| ||||||||||||||
Sbjct: 687 tcttcttcgtcggcttcaacgtctccat 660
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>gb|AC115625.3| Homo sapiens BAC clone RP11-588E23 from 2, complete sequence
          Length = 163505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   ctgcctctacaaagaaaaaa 104
            ||||||||||||||||||||
Sbjct: 7088 ctgcctctacaaagaaaaaa 7107
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>gb|AC064837.6| Homo sapiens BAC clone RP11-693G13 from 2, complete sequence
          Length = 111857

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tcttctaatggcataaatat 187
             ||||||||||||||||||||
Sbjct: 84384 tcttctaatggcataaatat 84403
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>gb|AC017081.8| Homo sapiens BAC clone RP11-470J24 from 2, complete sequence
          Length = 149462

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ccaaaactttcatatctaaa 264
             ||||||||||||||||||||
Sbjct: 29599 ccaaaactttcatatctaaa 29580
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>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   gtgtccaaaactttcatatc 260
             ||||||||||||||||||||
Sbjct: 41312 gtgtccaaaactttcatatc 41293
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>gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I16, complete sequence
          Length = 127922

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ctgcctctacaaagaaaaaa 104
             ||||||||||||||||||||
Sbjct: 55843 ctgcctctacaaagaaaaaa 55862
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>gb|AC006442.1|AC006442 Homo sapiens, clone hRPK.7_A_1, complete sequence
          Length = 155935

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aaagaaaaaacgcagtccac 114
             ||||||||||||||||||||
Sbjct: 31055 aaagaaaaaacgcagtccac 31036
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>dbj|AP002428.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-99C10, complete
              sequences
          Length = 175110

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    aaactttcatatctaaacca 267
              ||||||||||||||||||||
Sbjct: 139050 aaactttcatatctaaacca 139031
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>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete
             sequences
          Length = 170973

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   aaactttcatatctaaacca 267
             ||||||||||||||||||||
Sbjct: 31136 aaactttcatatctaaacca 31117
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>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   atatagttctcttcttctaatggc 179
             |||| |||||||||||||||||||
Sbjct: 42584 atatggttctcttcttctaatggc 42607
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>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   atatagttctcttcttctaatggc 179
             |||| |||||||||||||||||||
Sbjct: 78320 atatggttctcttcttctaatggc 78343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,347,287
Number of Sequences: 3902068
Number of extensions: 4347287
Number of successful extensions: 76403
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76275
Number of HSP's gapped (non-prelim): 128
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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