>HSCA_HAEDU (Q7VMA4) Chaperone protein hscA homolog|
          Length = 617

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +2

Query: 5   DK*NRSFPSITHFTRESRL----AYRQMQLSCNPTFSSCSILIPSCLKSTQRCSRFLPVE 172
           DK +   PS+ H+T  S++    A+ Q       T  S   LI   L   Q     LP +
Sbjct: 47  DKESALIPSVVHYTETSKMVGVTAFEQASYDPQNTIISAKRLIGRSLMDVQTRYPNLPYQ 106

Query: 173 MTRKQNYIAILFWNSGVKNWIEIFADLIVQL 265
               +N + ++    G K+ IE+ AD++  L
Sbjct: 107 FQASENGLPLIHTRQGYKSPIEVSADILSHL 137

>RNF31_MOUSE (Q924T7) RING finger protein 31|
          Length = 1066

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 413 VKEFAGAQERSPGRFSANGKRKQHPDRVGNMLSSAKQCIK 294
           V E AG Q+   G FS    RK   DR GN+  + ++C++
Sbjct: 529 VAELAGQQDPELGAFSCQEARKAWLDRHGNLDEAVEECVR 568

>RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RING-finger|
           ubiquitin-associated domain protein)
          Length = 1072

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 413 VKEFAGAQERSPGRFSANGKRKQHPDRVGNMLSSAKQCIK 294
           V E AG Q+   G FS    R+   DR GN+  + ++C++
Sbjct: 535 VAELAGQQDPGLGAFSCQEARRAWLDRHGNLDEAVEECVR 574

>HSCA_VIBPA (Q87S24) Chaperone protein hscA homolog|
          Length = 617

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +2

Query: 26  PSITHFTRESRL----AYRQMQLSCNPTFSSCSILIPSCLKSTQRCSRFLPVEMTRKQNY 193
           PS+ +++ ES +    A  + +     T  S   LI   LK  Q     LP       N 
Sbjct: 54  PSVVNYSAESTVVGYDAKAKAEFEPENTIISVKRLIGRSLKDIQSRYPSLPYRFKESDNG 113

Query: 194 IAILFWNSGVKNWIEIFADLIVQL 265
           + +L    G KN IE+ AD++  L
Sbjct: 114 LPVLQTAQGDKNPIEVSADILKAL 137

>NOS_LYMST (O61309) Nitric-oxide synthase (EC 1.14.13.39) (NOS type I) (Neuronal|
            NOS) (N-NOS) (nNOS)
          Length = 1153

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 83   SCNPTFSSCSILIPSCLKSTQRCSRFLP 166
            SC  T  SC   IPSC  S   C   +P
Sbjct: 939  SCENTMLSCETTIPSCENSMPSCENTMP 966


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,522,466
Number of Sequences: 219361
Number of extensions: 1370416
Number of successful extensions: 3451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)