>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 421     ttactcaagctttggtgctttgaggagat 449
               ||||| |||||||||||||||||||||||
Sbjct: 3367963 ttactgaagctttggtgctttgaggagat 3367935

>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
            insert sequence
          Length = 4125

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 421  ttactcaagctttggtgctttgaggagat 449
            ||||| |||||||||||||||||||||||
Sbjct: 3825 ttactgaagctttggtgctttgaggagat 3797

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 421     ttactcaagctttggtgctttgaggagat 449
               ||||| |||||||||||||||||||||||
Sbjct: 3367908 ttactgaagctttggtgctttgaggagat 3367880

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 421   ttactcaagctttggtgctttgaggagat 449
             ||||| |||||||||||||||||||||||
Sbjct: 47016 ttactgaagctttggtgctttgaggagat 46988

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 278      catgatatcattaccactttat 299
                ||||||||||||||||||||||
Sbjct: 16841500 catgatatcattaccactttat 16841521

>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F01
          Length = 119248

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 278   catgatatcattaccactttat 299
             ||||||||||||||||||||||
Sbjct: 54865 catgatatcattaccactttat 54886

>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3,
             complete sequence
          Length = 93805

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 271   acaaccacatgatatcattac 291
             |||||||||||||||||||||
Sbjct: 55914 acaaccacatgatatcattac 55934

>ref|NM_001030738.1| Gallus gallus interleukin-1 receptor-associated kinase 4 (IRAK4),
            mRNA
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  acattgctttgctgaagata 319
            ||||||||||||||||||||
Sbjct: 2025 acattgctttgctgaagata 2006

>gb|AC150532.2| Bos taurus  BAC CH240-105A12 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186851

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    caattttgattccatcttgt 130
              ||||||||||||||||||||
Sbjct: 176981 caattttgattccatcttgt 177000

>gb|AC149716.2| Bos taurus  BAC CH240-31B10 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 171707

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    caattttgattccatcttgt 130
              ||||||||||||||||||||
Sbjct: 104441 caattttgattccatcttgt 104422

>ref|NM_183426.1| Mus musculus strawberry notch homolog (Drosophila) (Stno), mRNA
          Length = 4679

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 831 ccacacggtctgggtgttgctttc 808

>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence
          Length = 216489

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   ccactcggtctgggtgttgctttc 352
             |||| |||||||||||||||||||
Sbjct: 69412 ccacacggtctgggtgttgctttc 69435

>gb|BC064113.1| Mus musculus strawberry notch homolog (Drosophila), mRNA (cDNA
           clone IMAGE:3376209), complete cds
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 588 ccacacggtctgggtgttgctttc 565

>gb|BC056369.1| Mus musculus strawberry notch homolog (Drosophila), mRNA (cDNA
           clone MGC:73429 IMAGE:6831600), complete cds
          Length = 4679

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 831 ccacacggtctgggtgttgctttc 808

>emb|AJ720408.1| Gallus gallus mRNA for hypothetical protein, clone 17b10
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  acattgctttgctgaagata 319
            ||||||||||||||||||||
Sbjct: 2025 acattgctttgctgaagata 2006

>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   gagtcaaaaattggatagag 238
             ||||||||||||||||||||
Sbjct: 25025 gagtcaaaaattggatagag 25044

>dbj|AK149806.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530019J08 product:Putative
           strawberry notch protein homolog [Mus musculus], full
           insert sequence
          Length = 3904

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 855 ccacacggtctgggtgttgctttc 832

>gb|AC023136.6| Homo sapiens BAC clone RP11-497K21 from 4, complete sequence
          Length = 185593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  acaaccacatgatatcatta 290
            ||||||||||||||||||||
Sbjct: 5129 acaaccacatgatatcatta 5110

>dbj|AK155674.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730119H15
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4350

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 828 ccacacggtctgggtgttgctttc 805

>dbj|AK155462.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630230G07
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4351

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 829 ccacacggtctgggtgttgctttc 806

>dbj|AK170733.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630116P09
           product:hypothetical protein, full insert sequence
          Length = 2133

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 623 ccacacggtctgggtgttgctttc 600

>dbj|AK089496.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730040C21
           product:weakly similar to CDNA FLJ10833 FIS, CLONE
           NT2RP4001206, MODERATELY SIMILAR TO DROSOPHILA
           MELANOGASTER STRAWBERRY NOTCH MRNA (FRAGMENT) [Homo
           sapiens], full insert sequence
          Length = 2466

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 750 ccacacggtctgggtgttgctttc 727

>gb|AY075363.1| Drosophila melanogaster GM08326 full insert cDNA
          Length = 1999

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   aagacaaatgaaataggtca 22
           ||||||||||||||||||||
Sbjct: 822 aagacaaatgaaataggtca 841

>emb|AJ512611.1|MMU512611 Mus musculus mRNA for putative strawberry notch protein (Sno gene)
          Length = 4807

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 ccactcggtctgggtgttgctttc 352
           |||| |||||||||||||||||||
Sbjct: 987 ccacacggtctgggtgttgctttc 964

>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367,
             complete sequence
          Length = 112717

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   actccttcacgcacagctta 423
             ||||||||||||||||||||
Sbjct: 31665 actccttcacgcacagctta 31646


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,327,972
Number of Sequences: 3902068
Number of extensions: 4327972
Number of successful extensions: 75730
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75618
Number of HSP's gapped (non-prelim): 112
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)