>gb|BT009533.1| Triticum aestivum clone wr1.pk0133.f5:fis, full insert mRNA sequence
          Length = 1820

 Score =  119 bits (60), Expect = 7e-24
 Identities = 81/88 (92%)
 Strand = Plus / Minus

                                                                        
Query: 59   ttacaatcctttacagacgagaagggcgacagttttacactaggcacttgcctccctgta 118
            |||||||||||||||| ||| |||||||||||||| ||||   |||||||||||||||||
Sbjct: 1305 ttacaatcctttacaggcgaaaagggcgacagtttcacaccgagcacttgcctccctgta 1246

                                        
Query: 119  atgctagtctagcacaatggcgagccgc 146
            |||||||||||||||||||| |||||||
Sbjct: 1245 atgctagtctagcacaatggtgagccgc 1218



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                  
Query: 358  tcttactggtccacctcgtcaggtaagatgacgttatcaaggtaaacgagctgc 411
            ||||||||||||||||||||||| ||||||||||| |  ||||| |||||||||
Sbjct: 1086 tcttactggtccacctcgtcaggcaagatgacgttgttgaggtagacgagctgc 1033



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 4    agagcgaaacagtgcggcataactttattagcaat 38
            |||||||||||||||||||| ||||||||||||||
Sbjct: 1374 agagcgaaacagtgcggcatcactttattagcaat 1340



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 159  cacctgcgatctcaaattattctgtagg 186
            |||||||||||| |||||||| ||||||
Sbjct: 1218 cacctgcgatctgaaattattttgtagg 1191

>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16,
              complete sequence
          Length = 162082

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                            
Query: 360    ttactggtccacctcgtcaggtaagatgac 389
              ||||||||||||||||||||||||||||||
Sbjct: 133935 ttactggtccacctcgtcaggtaagatgac 133964

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                              
Query: 360      ttactggtccacctcgtcaggtaagatgac 389
                ||||||||||||||||||||||||||||||
Sbjct: 16342582 ttactggtccacctcgtcaggtaagatgac 16342611

>dbj|AK058281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D05, full
            insert sequence
          Length = 1599

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                          
Query: 360  ttactggtccacctcgtcaggtaagatgac 389
            ||||||||||||||||||||||||||||||
Sbjct: 1194 ttactggtccacctcgtcaggtaagatgac 1165

>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete
              sequence
          Length = 208470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 335    tagggcatatatatctatatg 355
              |||||||||||||||||||||
Sbjct: 112846 tagggcatatatatctatatg 112826

>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence
          Length = 179750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    atgttgttattgtttataacagtt 60
             ||||||||||||||||||| ||||
Sbjct: 30924 atgttgttattgtttataatagtt 30947

>emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in linkage group 3,
             complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tgttgttattgtttataaca 57
             ||||||||||||||||||||
Sbjct: 74620 tgttgttattgtttataaca 74639

>gb|DQ153168.1| Lolium multiflorum plastid 5-enolpyruvylshikimate 3-phosphate
           synthase mRNA, partial cds; nuclear gene for plastid
           product
          Length = 1205

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 360 ttactggtccacctcgtcag 379
           ||||||||||||||||||||
Sbjct: 898 ttactggtccacctcgtcag 917

>gb|AC136740.10| Mus musculus chromosome 7, clone RP23-137A24, complete sequence
          Length = 219863

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 37     atgttgttattgtttataacagtt 60
              ||||||||||||||||||| ||||
Sbjct: 193770 atgttgttattgtttataatagtt 193793

>emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chromosome 6, complete
             sequence
          Length = 149389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 258   ctccagcgccatgttgaactgtga 281
             ||||| ||||||||||||||||||
Sbjct: 28127 ctccaccgccatgttgaactgtga 28104

>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part
             of the gene for C-terminal PDZ domain ligand of neuronal
             nitric oxide synthase (CAPON), complete sequence
          Length = 208408

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    tgttgttattgtttataacagtta 61
             |||||||||||||||||| |||||
Sbjct: 15349 tgttgttattgtttataatagtta 15326

>emb|BX769175.12| Zebrafish DNA sequence from clone DKEY-229K5 in linkage group 3,
             complete sequence
          Length = 154794

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tgttgttattgtttataaca 57
             ||||||||||||||||||||
Sbjct: 44123 tgttgttattgtttataaca 44142

>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79
          Length = 199536

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 341    atatatatctatatgcatcttact 364
              |||||||| |||||||||||||||
Sbjct: 125168 atatatatatatatgcatcttact 125191

>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project)
          Length = 96475

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 341   atatatatctatatgcatcttact 364
             |||||||| |||||||||||||||
Sbjct: 60389 atatatatatatatgcatcttact 60412

>dbj|AK155714.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730208F19
           product:unclassifiable, full insert sequence
          Length = 1016

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 37  atgttgttattgtttataacagtt 60
           ||||||||||||||||||| ||||
Sbjct: 715 atgttgttattgtttataatagtt 692

>gb|AC090666.6| Homo sapiens chromosome 18, clone RP11-116K4, complete sequence
          Length = 185255

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    atgttgttattgtttataac 56
             ||||||||||||||||||||
Sbjct: 85341 atgttgttattgtttataac 85360

>gb|AC122427.6| Mus musculus BAC clone RP24-175C2 from chromosome 1, complete sequence
          Length = 180773

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   gcatatatatctatatgcat 358
             ||||||||||||||||||||
Sbjct: 54435 gcatatatatctatatgcat 54416

>emb|BX088593.12| Zebrafish DNA sequence from clone DKEY-6E12 in linkage group 18, complete
              sequence
          Length = 251217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gtccacctcgtcaggtaaga 385
              ||||||||||||||||||||
Sbjct: 134814 gtccacctcgtcaggtaaga 134833

>emb|AL845284.4| Zebrafish DNA sequence from clone DKEY-277C13, complete sequence
          Length = 226168

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    gtccacctcgtcaggtaaga 385
              ||||||||||||||||||||
Sbjct: 136150 gtccacctcgtcaggtaaga 136169

>emb|BX942841.12| Zebrafish DNA sequence from clone CH211-59D15 in linkage group 20,
              complete sequence
          Length = 202032

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    tcatgaagtgtacacaaaag 307
              ||||||||||||||||||||
Sbjct: 130968 tcatgaagtgtacacaaaag 130949

>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence
          Length = 180681

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aatgttgttattgtttataa 55
             ||||||||||||||||||||
Sbjct: 56618 aatgttgttattgtttataa 56599

>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence
          Length = 192649

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    tgttgttattgtttataaca 57
             ||||||||||||||||||||
Sbjct: 81192 tgttgttattgtttataaca 81211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,855,958
Number of Sequences: 3902068
Number of extensions: 2855958
Number of successful extensions: 74388
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74311
Number of HSP's gapped (non-prelim): 77
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)