>NU2M_NEUCR (Q35140) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 583

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 403 TAIFVLFCFIAAIVLYVTPLQVLAALGGFYAMRHPRFRHRLP 278
           T +F +F F+ +I+  +  L     +  FY MRHPRF ++ P
Sbjct: 64  TQVFQIFIFLISIL--ILQLTSFDPIKKFYIMRHPRFINKWP 103

>OCLN_PONPY (Q5RFS5) Occludin|
          Length = 522

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -3

Query: 421 WRDPRATAIFVL----FCFIAAIVLYVT 350
           + DPRA   F+L    FCFIAA+V++VT
Sbjct: 131 YTDPRAAKGFMLAMAAFCFIAALVIFVT 158

>OCLN_HUMAN (Q16625) Occludin|
          Length = 522

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -3

Query: 421 WRDPRATAIFVL----FCFIAAIVLYVT 350
           + DPRA   F+L    FCFIAA+V++VT
Sbjct: 131 YTDPRAAKGFMLAMAAFCFIAALVIFVT 158

>OCLN_CANFA (Q28269) Occludin|
          Length = 521

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -3

Query: 421 WRDPRATAIFVL----FCFIAAIVLYVT 350
           + DPRA   F+L    FCFIAA+V++VT
Sbjct: 130 YTDPRAAKGFLLAMVAFCFIAALVIFVT 157

>DPO4_RHOBA (Q7USY7) DNA polymerase IV (EC 2.7.7.7) (Pol IV)|
          Length = 396

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 416 GSSGHGHICAILFHSRDSALRHTAPGSRSIRRVLCHEAPKVQAQV 282
           GS G G + A  + +R+  +    PGSR+I+  LC  A  V+ ++
Sbjct: 31  GSEGRGVVTAASYEAREYGIHSAMPGSRAIK--LCPHADFVRGRL 73

>OPSD_LOLFO (P24603) Rhodopsin|
          Length = 452

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = -3

Query: 430 LLSWRDPRATAIFVLFCFIAAIVLYVTPLQVLAALGG------FYAMRHPRFRHRLPS 275
           LLSW      A+   F  I  +  Y   L V+ A          Y++ HP+FR R+ S
Sbjct: 271 LLSWSPYAVVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFRERIAS 328

>PER44_ARATH (Q93V93) Peroxidase 44 precursor (EC 1.11.1.7) (Atperox P44)|
           (ATP35)
          Length = 310

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 403 TAIFVLFCFIAAIVLYVTPLQVLAALGGFYAMRHPRFRHRLPSTPVNFFR 254
           TA+F LFCF+A       P  +     GFY+   PR    + S   N FR
Sbjct: 5   TALFFLFCFLA-------PSALAQLRTGFYSRSCPRAESIVASVVANRFR 47

>OCLN_MOUSE (Q61146) Occludin|
          Length = 521

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -3

Query: 421 WRDPRATAIFVL----FCFIAAIVLYVT 350
           + DPRA   F+L    FCFIA++V++VT
Sbjct: 129 YTDPRAAKGFLLAMAAFCFIASLVIFVT 156

>OCLN_RAT (Q6P6T5) Occludin|
          Length = 523

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 4/28 (14%)
 Frame = -3

Query: 421 WRDPRATAIFVL----FCFIAAIVLYVT 350
           + DPRA   F+L    FCFIA++V++VT
Sbjct: 131 YTDPRAAKGFLLAMAAFCFIASLVIFVT 158

>YGB5_YEAST (P33199) Hypothetical 15.0 kDa protein in PDR6-PDR1 intergenic|
           region
          Length = 130

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 16  DISSTCFQNLASHDKLSAHYFLDPASNTI 102
           D+ S CF N    D LS + FL P S+ +
Sbjct: 72  DVDSLCFSNCFQPDALSGNVFLPPRSSNM 100

>K6PF2_SYNY3 (Q55988) 6-phosphofructokinase 2 (EC 2.7.1.11) (Phosphofructokinase|
           2) (Phosphohexokinase 2)
          Length = 384

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -2

Query: 263 LLQAFASEDGQYAVKMLLSGGL-IVVIPRITPCLSL*L---AVLLFVTVRRSGLMSLSIV 96
           ++Q    + G   +   ++GG  I++IP ITPCL+  +        + +R+SG     IV
Sbjct: 184 IVQVMGRDAGHLTLHAGIAGGADIILIPEITPCLTSEIIRNCCYQLMNLRKSGRHFALIV 243

Query: 95  LDAG 84
           +  G
Sbjct: 244 ISEG 247

>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = -2

Query: 383  LFHSRDSALRHTAPGSRSIRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLL 210
            L+HS+D +L  T PG+++I  +     P+     + NA K ++ +   DG+ A+K L+
Sbjct: 1389 LWHSQDGSLLKTLPGNKAIYGI--SFTPQGDLIASANADKTVKIWRVRDGK-ALKTLI 1443

>Y109_MYCPN (P75453) Protein MPN109 (C09_orf165)|
          Length = 165

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +1

Query: 1   RITQQDISSTCFQNLASHDKLSAHYFLDPASNTIDRLISPERRTVTNNNTASYSDRHGVI 180
           +I Q+D    C+Q+L  H + S  Y LD  +NT   L       +         + HGV 
Sbjct: 10  KINQKD----CWQSLIDHKERS--YSLDFVNNTEKEL------PLIYGYEVKDFENHGVK 57

Query: 181 LGITTIRPPD 210
           +G TT +P D
Sbjct: 58  IGYTTCKPSD 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,960,745
Number of Sequences: 219361
Number of extensions: 1307351
Number of successful extensions: 3158
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3158
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)