>YGB5_YEAST (P33199) Hypothetical 15.0 kDa protein in PDR6-PDR1 intergenic|
           region
          Length = 130

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 16  DISSTCFQNLASHDKLSAHYFLDPASNTI 102
           D+ S CF N    D LS + FL P S+ +
Sbjct: 72  DVDSLCFSNCFQPDALSGNVFLPPRSSNM 100

>K6PF2_SYNY3 (Q55988) 6-phosphofructokinase 2 (EC 2.7.1.11) (Phosphofructokinase|
           2) (Phosphohexokinase 2)
          Length = 384

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -1

Query: 263 LLQAFASEDGQYAVKMLLSGGL-IVVIPRITPCLSL*L---AVLLFVTVRRSGLMSLSIV 96
           ++Q    + G   +   ++GG  I++IP ITPCL+  +        + +R+SG     IV
Sbjct: 184 IVQVMGRDAGHLTLHAGIAGGADIILIPEITPCLTSEIIRNCCYQLMNLRKSGRHFALIV 243

Query: 95  LDAG 84
           +  G
Sbjct: 244 ISEG 247

>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = -1

Query: 383  LFHSRDSALRHTAPGSRSIRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLL 210
            L+HS+D +L  T PG+++I  +     P+     + NA K ++ +   DG+ A+K L+
Sbjct: 1389 LWHSQDGSLLKTLPGNKAIYGI--SFTPQGDLIASANADKTVKIWRVRDGK-ALKTLI 1443

>GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 251 TPEEVYRR*RQPVP--EPWVPHGIEPS*CCENLERCDVEH 364
           TPEEV +R R P P   P V     P  C + + +C  EH
Sbjct: 755 TPEEVIQRVRSPPPLCRPLVSMDQAPMECIQLMAQCWAEH 794

>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 251 TPEEVYRR*RQPVP--EPWVPHGIEPS*CCENLERCDVEH 364
           TPEEV +R R P P   P V     P  C + + +C  EH
Sbjct: 755 TPEEVIQRVRSPPPLCRPLVSMDQAPMECIQLMTQCWAEH 794

>MURG_HAEIN (P45065) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 386 ILFHSRDSALRHTAPGSRSIRRVLCHEAPKVQAQVA 279
           I F  R+  LR    G     RVL H  PKV AQ+A
Sbjct: 172 IRFSDREEKLRVLVVGGSQGARVLNHTLPKVVAQLA 207

>MURG_HAEI8 (Q4QLF8) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 386 ILFHSRDSALRHTAPGSRSIRRVLCHEAPKVQAQVA 279
           I F  R+  LR    G     RVL H  PKV AQ+A
Sbjct: 172 IRFSDREEKLRVLVVGGSQGARVLNHTLPKVVAQLA 207

>GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1109

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 251 TPEEVYRR*RQPVP--EPWVPHGIEPS*CCENLERCDVEH 364
           TPEEV  R R P P   P V     P  C + +++C  EH
Sbjct: 756 TPEEVVERVRSPPPLCRPSVSMDQAPVECIQLMKQCWAEH 795

>NU2M_NEUCR (Q35140) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 583

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 379 FIAAIVLYVTPLQVLAALGGFYAMRHPRFRHRLP 278
           FI  I + +  L     +  FY MRHPRF ++ P
Sbjct: 70  FIFLISILILQLTSFDPIKKFYIMRHPRFINKWP 103

>Y109_MYCPN (P75453) Protein MPN109 (C09_orf165)|
          Length = 165

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +1

Query: 4   ITQQDISSTCFQNLASHDKLSAHYFLDPASNTIDRLISPERRTVTNNNTASYSDRHGVIL 183
           I Q+D    C+Q+L  H + S  Y LD  +NT   L       +         + HGV +
Sbjct: 11  INQKD----CWQSLIDHKERS--YSLDFVNNTEKEL------PLIYGYEVKDFENHGVKI 58

Query: 184 GITTIRPPD 210
           G TT +P D
Sbjct: 59  GYTTCKPSD 67

>RDRP_ACLSA (P54891) RNA-directed RNA polymerase (EC 2.7.7.48) (RNA replicase)|
            (216.5 kDa protein) (ORF1)
          Length = 1885

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 7    TQQDISSTCFQNLASHDKLSAHYFLDPASNTIDRLISP---ERRTVTN-NNTASYSDRHG 174
            T  D      QNL   D  SAH+F++   N I+ ++ P   E+   +N  N  ++ +  G
Sbjct: 1210 TMNDFIGIDEQNLIYKDMPSAHHFMENKGNHIEVILVPSMIEKELYSNYGNVMTFGESQG 1269

Query: 175  V 177
            +
Sbjct: 1270 L 1270

>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein|
           (UbcH7-associated protein 1)
          Length = 2517

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 329 IRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLLS 207
           +  +LC+  P+++     +AGK+LQA A+ D      +LLS
Sbjct: 171 LMHMLCNPEPQIRR----SAGKMLQALAAHDAGSRAHVLLS 207

>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 287 QVAFNAGKLLQAFASEDGQYAVKMLLSGGLIVVIPRITPC 168
           +VAF  G L+     E G+ A+++L + G+ V+IP+   C
Sbjct: 264 RVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVC 303

>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)|
          Length = 488

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 356 RHTAPGSRSIRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQ 231
           RH A   R +R V+     +++A +  + G+ LQ F  EDG+
Sbjct: 72  RHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGK 113

>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092|
          Length = 489

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -1

Query: 311 HEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLLSGGLIVVIPRITPC 168
           + A   + +VAF  G L+       G+ A+K+L + G+ VVIP+   C
Sbjct: 253 YPAESEKLRVAFFTGCLVDFRLQNVGKDAIKVLNAHGVSVVIPKNQVC 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,313,778
Number of Sequences: 219361
Number of extensions: 1102556
Number of successful extensions: 2744
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2744
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)