>KPK1_PHAVU (P15792) Protein kinase PVPK-1 (EC 2.7.11.1)|
          Length = 609

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
 Frame = +2

Query: 305 GIIHYFPLP----KPSRTPSRASRSYD 373
           G+ H+ PLP    +PSR P RASR+YD
Sbjct: 20  GVHHHDPLPSGTPQPSRPPLRASRNYD 46

>TRPB2_METMA (Q8Q001) Tryptophan synthase beta chain 2 (EC 4.2.1.20)|
          Length = 442

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 322 KVVYDPLIFFAPSSGEVSCAGSSHTIACAVD 230
           K V+D  + FA + G V    SSH I CA+D
Sbjct: 374 KEVFDAAVQFARTEGIVPAPESSHAIRCAID 404

>PDE4A_HUMAN (P27815) cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC|
           3.1.4.17) (DPDE2) (PDE46)
          Length = 886

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 11/74 (14%)
 Frame = +2

Query: 233 HGASNGVGAAGTTNLSARGGEKNKGIIHYFPLPKPSRTPSRASRSYDLPLWAA------- 391
           HG   G G AG       GG   +      P P P R+P  +  S  L L A        
Sbjct: 91  HGTGTGSGGAG-------GGSSRRFEAENGPTPSPGRSPLDSQASPGLVLHAGAATSQRR 143

Query: 392 ----YSSDSDWSLS 421
               Y SDSD+ +S
Sbjct: 144 ESFLYRSDSDYDMS 157

>TRPB2_METAC (Q8TL44) Tryptophan synthase beta chain 2 (EC 4.2.1.20)|
          Length = 442

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 316 VYDPLIFFAPSSGEVSCAGSSHTIACAVD 230
           V+D  + FA + G V    SSH I CA+D
Sbjct: 376 VFDAAVQFARTEGIVPAPESSHAIRCAID 404

>AOC4_ARATH (Q93ZC5) Allene oxide cyclase 4, chloroplast precursor (EC|
           5.3.99.6)
          Length = 254

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 330 RSHQEHQAELRGAMTCHYGQRTAATPTGLSRRA 428
           R+HQ HQ+   G     + QR ++   GLS RA
Sbjct: 21  RNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRA 53

>POL_HV2D1 (P17757) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix|
           protein p17 (MA); Capsid protein p24 (CA); p2 spacer
           peptide; Nucleocapsid protein* (NC*); Transframe peptide
           (TF) (p6 pol); Protease (EC 3.4.23.47) (Retropepsin)
           (PR); Reverse trans
          Length = 1461

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
 Frame = +1

Query: 22  YISLGTYQNTGVRIIINPQKRVGTHL*DIQLVTVWATNFPANIF----LAKLGE--NLYR 183
           +I+   Y+N  ++++    KRV          T+   + P NIF    LA LG   NL  
Sbjct: 563 FINTKEYKNVEIKVL---NKRVRA--------TIMTGDTPINIFGRNILATLGMSLNLPV 611

Query: 184 SRPSSVXXXXXPGTTNPRRKQW 249
           ++   +     PG   PR KQW
Sbjct: 612 AKLDPIKVTLKPGKDGPRLKQW 633


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,023,797
Number of Sequences: 219361
Number of extensions: 1442228
Number of successful extensions: 3648
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3646
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)