>LY6E_CHICK (Q90986) Lymphocyte antigen Ly-6E precursor (Stem cell antigen 2)|
           (SCA-2)
          Length = 126

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 424 LCFKCSSATSNFGANCCTISKCTILPSIVANHCTNEHHCLT 302
           +CF CS A+SN+   C T  KC            NE HC+T
Sbjct: 22  ICFSCSDASSNWA--CLTPVKC----------AENEEHCVT 50

>MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 transcription|
           factor)
          Length = 163

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 158 DKTVAIQKELCFHISQDTRLPPNDI 232
           ++T+ I KEL   ++QDTR  PND+
Sbjct: 138 ERTLTISKELSDLLNQDTRCSPNDV 162

>CCSA_CYACA (O19901) Cytochrome c biogenesis protein ccsA|
          Length = 293

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
 Frame = -1

Query: 425 SLLQVLISHKQLRSKLLYNKQVYYFAF--HC---GQSLYK*APLSNCTRTHHQKLVNLLQ 261
           + L  L+S     +KL Y KQ+  F+    C      +     L  C R  +  L NL +
Sbjct: 16  AFLGALVSSLFYWAKLTYYKQIQVFSLPKFCLIFSNCIIAGMLLERCFRYSYFPLSNLYE 75

Query: 260 NLPSVSWAVKC-------HLAVVSCLAICENTILFGWQLFCLPSLL 144
           +L  +SW +          L+++  +     T++ G+  + LP  L
Sbjct: 76  SLLFLSWVLNIITIIFVDKLSIIGAIGSSAVTLIIGYANYILPPSL 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,749,696
Number of Sequences: 219361
Number of extensions: 1007780
Number of successful extensions: 2104
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)