>VPR_HV2G1 (P18046) VPR protein (R ORF protein)|
          Length = 105

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 99  TNYTPESGKAKEVTGGDLKFFFLCMVHRKTLRSF--RMIIHMGSGSNSRNGN 248
           T + PE G  +   GGD     L  +  + L+ F  R++I +G+  +SR+G+
Sbjct: 6   TEFPPEDGTPRRELGGDWVIRILGEIKEEALKHFDPRLLIALGNYIHSRHGD 57

>PSD3_CAEEL (Q04908) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit rpn-3)
          Length = 504

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +3

Query: 159 FFLCMVHRKTLRSFRMIIHMGSGSNSRNGNYQL*INHQKEASLICWLLLHY 311
           +FLC+++    R  R+  H G   NSR     L    + +A LICWLL  Y
Sbjct: 180 YFLCVIYE---REGRLFDHQGF-LNSRLRTATLRNFSESQAVLICWLLRCY 226

>MASS1_MOUSE (Q8VHN7) Monogenic audiogenic seizure susceptibility protein 1|
           precursor (Very large G-protein coupled receptor 1)
           (Neurepin)
          Length = 6298

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 176 TQENVTIFQDDHPHGVGVQLKKWQLSTIDKSSKG 277
           T  N+TI ++D+PHG+ ++     LS   K SKG
Sbjct: 875 TLVNITILKNDYPHGI-IEFVSDGLSASIKESKG 907


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,649,307
Number of Sequences: 219361
Number of extensions: 1158766
Number of successful extensions: 2166
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2165
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)