ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chrom... 44 0.39
2gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
3gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, comp... 42 1.5
4emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in l... 42 1.5
5emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene 42 1.5
6gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp... 42 1.5
7gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, com... 42 1.5
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
9emb|BX005104.7| Zebrafish DNA sequence from clone DKEY-191D13 in... 42 1.5
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
11gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, co... 42 1.5
12gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, comple... 42 1.5
13emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 42 1.5
14emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 42 1.5
15gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, co... 42 1.5
16gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, co... 40 6.0
17gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosom... 40 6.0
18gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosom... 40 6.0
19gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosom... 40 6.0
20gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 40 6.0
21gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, compl... 40 6.0
22ref|XM_975010.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.0
23ref|XM_974871.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.0
24ref|XM_973576.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.0
25emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chro... 40 6.0
26ref|XM_749223.1| Aspergillus fumigatus Af293 ubiquitin conjugati... 40 6.0
27gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, c... 40 6.0
28gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosom... 40 6.0
29gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosom... 40 6.0
30gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosom... 40 6.0
31gb|AC133889.9| Mus musculus chromosome 16, clone RP23-380I13, co... 40 6.0
32gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, co... 40 6.0
33gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosom... 40 6.0
34emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chro... 40 6.0
35dbj|AK148940.1| Mus musculus 2 days neonate sympathetic ganglion... 40 6.0
36gb|AF116641.1|AF116641 Homo sapiens PRO1617 mRNA, complete cds 40 6.0
37gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, comple... 40 6.0
38emb|AL831764.16| Mouse DNA sequence from clone RP23-203A3 on chr... 40 6.0
39emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chr... 40 6.0
40emb|AL845360.10| Mouse DNA sequence from clone RP23-421L7 on chr... 40 6.0
41dbj|AP000412.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.0
42emb|AJ338005.1|HSA338005 Homo sapiens genomic sequence surroundi... 40 6.0
43gb|AC154739.2| Mus musculus BAC clone RP23-117B4 from 9, complet... 40 6.0
44gb|AC154630.2| Mus musculus BAC clone RP23-319C8 from 9, complet... 40 6.0
45gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Canc... 40 6.0
46emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chr... 40 6.0
47emb|AL807400.9| Mouse DNA sequence from clone RP23-196A4 on chro... 40 6.0
48emb|AL132989.5|CNS01DTX Human chromosome 14 DNA sequence BAC C-2... 40 6.0 
>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete
             sequence
          Length = 207571

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 267   accagaagcttccttcttccat 288
             ||||||||||||||||||||||
Sbjct: 18688 accagaagcttccttcttccat 18667
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   ccacaaaataacattcagagt 245
             |||||||||||||||||||||
Sbjct: 85791 ccacaaaataacattcagagt 85811
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>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence
          Length = 133815

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   tccatccaaatgaattgtcca 194
             |||||||||||||||||||||
Sbjct: 50105 tccatccaaatgaattgtcca 50085
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>emb|BX537106.6| Zebrafish DNA sequence from clone DKEY-98P3 in linkage group 20 Contains
              the gene for a novel protein similar to vertebrate
              dermatopontin (DPT), the atp1b1a gene for ATPase, Na+/K+
              transporting, beta 1a polypeptide, the gene for a novel
              protein containing a homocysteine S-methyltransferase
              domain, the bivm gene for basic, immunoglobulin-like
              variable motif containing, the 5' end of the gene for a
              novel zinc finger protein (wu:fc06h02), the ndpkz4 gene for
              nucleoside diphosphate kinase-Z4 and the gene for a novel
              protein containing an inosine-uridine preferring nucleoside
              hydrolase doamin, complete sequence
          Length = 162005

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    atgcatcccacaaaataacat 238
              |||||||||||||||||||||
Sbjct: 115020 atgcatcccacaaaataacat 115040
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>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    tccatccaaatgaattgtcca 194
              |||||||||||||||||||||
Sbjct: 203820 tccatccaaatgaattgtcca 203840
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>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    tccatccaaatgaattgtcca 194
              |||||||||||||||||||||
Sbjct: 179116 tccatccaaatgaattgtcca 179096
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>gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, complete sequence
          Length = 198967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   cagaagcttccttcttccatt 289
             |||||||||||||||||||||
Sbjct: 19215 cagaagcttccttcttccatt 19235
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 225     ccacaaaataacattcagagt 245
               |||||||||||||||||||||
Sbjct: 3229194 ccacaaaataacattcagagt 3229174
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>emb|BX005104.7| Zebrafish DNA sequence from clone DKEY-191D13 in linkage group 6,
              complete sequence
          Length = 152217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    atgcatcccacaaaataacat 238
              |||||||||||||||||||||
Sbjct: 144255 atgcatcccacaaaataacat 144275
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 225     ccacaaaataacattcagagt 245
               |||||||||||||||||||||
Sbjct: 3237899 ccacaaaataacattcagagt 3237879
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>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence
          Length = 132960

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   tccatccaaatgaattgtcca 194
             |||||||||||||||||||||
Sbjct: 50104 tccatccaaatgaattgtcca 50084
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>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence
          Length = 120229

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    tccatccaaatgaattgtcca 194
              |||||||||||||||||||||
Sbjct: 118690 tccatccaaatgaattgtcca 118670
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   atgcatcccacaaaataacat 238
             |||||||||||||||||||||
Sbjct: 25972 atgcatcccacaaaataacat 25992
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   atgcatcccacaaaataacat 238
             |||||||||||||||||||||
Sbjct: 17594 atgcatcccacaaaataacat 17614
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>gb|AC167132.12| Mus musculus chromosome 8, clone RP24-335A22, complete sequence
          Length = 203284

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   cagaagcttccttcttccatt 289
             |||||||||||||||||||||
Sbjct: 46662 cagaagcttccttcttccatt 46642
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>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cagaagcttccttcttccat 288
            ||||||||||||||||||||
Sbjct: 3481 cagaagcttccttcttccat 3462
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>gb|AC140354.2| Mus musculus BAC clone RP24-249A13 from chromosome 12, complete
             sequence
          Length = 157998

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   ccttcttccattcctgtgtc 297
             ||||||||||||||||||||
Sbjct: 35034 ccttcttccattcctgtgtc 35053
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>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete
             sequence
          Length = 136832

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 62510 cagaagcttccttcttccat 62529
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>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence
          Length = 209820

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cagaagcttccttcttccat 288
              ||||||||||||||||||||
Sbjct: 154326 cagaagcttccttcttccat 154307
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence
          Length = 193184

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    cagaagcttccttcttccat 288
              ||||||||||||||||||||
Sbjct: 167982 cagaagcttccttcttccat 168001
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>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence
          Length = 250903

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    cagaagcttccttcttccat 288
              ||||||||||||||||||||
Sbjct: 109193 cagaagcttccttcttccat 109174
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>ref|XM_975010.1| PREDICTED: Mus musculus hypothetical protein LOC669245 (LOC669245),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 cagaagcttccttcttccat 288
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>ref|XM_974871.1| PREDICTED: Mus musculus hypothetical protein LOC664925 (LOC664925),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 cagaagcttccttcttccat 288
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>ref|XM_973576.1| PREDICTED: Mus musculus hypothetical protein LOC674284 (LOC674284),
           mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 cagaagcttccttcttccat 288
           ||||||||||||||||||||
Sbjct: 136 cagaagcttccttcttccat 117
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>emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chromosome 17, complete
             sequence
          Length = 197841

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 85983 cagaagcttccttcttccat 85964
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>ref|XM_749223.1| Aspergillus fumigatus Af293 ubiquitin conjugating enzyme (Afu3g13060)
            partial mRNA
          Length = 3189

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  gcttccttcttccattcctg 293
            ||||||||||||||||||||
Sbjct: 2593 gcttccttcttccattcctg 2612
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>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence
          Length = 194593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    cagaagcttccttcttccat 288
              ||||||||||||||||||||
Sbjct: 188090 cagaagcttccttcttccat 188109
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>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete sequence
          Length = 154681

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    caaacctccatcatttcttt 444
              ||||||||||||||||||||
Sbjct: 132599 caaacctccatcatttcttt 132580
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>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete
             sequence
          Length = 170250

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 17379 cagaagcttccttcttccat 17398
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>gb|AC123943.4| Mus musculus BAC clone RP23-480G20 from chromosome 12, complete
             sequence
          Length = 171251

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   caaacctccatcatttcttt 444
             ||||||||||||||||||||
Sbjct: 52696 caaacctccatcatttcttt 52715
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>gb|AC133889.9| Mus musculus chromosome 16, clone RP23-380I13, complete sequence
          Length = 235574

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 55849 cagaagcttccttcttccat 55868
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>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence
          Length = 215975

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   acatccaagatcacagcaaa 167
             ||||||||||||||||||||
Sbjct: 76599 acatccaagatcacagcaaa 76580
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>gb|AC154906.3| Mus musculus BAC clone RP23-344H23 from chromosome 12, complete sequence
          Length = 205985

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    ccttcttccattcctgtgtc 297
              ||||||||||||||||||||
Sbjct: 151574 ccttcttccattcctgtgtc 151593
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>emb|AL390035.10| Human DNA sequence from clone RP13-9D14 on chromosome X Contains the 5'
              end of gene KIAA2022 and a CpG island, complete sequence
          Length = 148057

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    caaaatgcaaccagaagctt 277
              ||||||||||||||||||||
Sbjct: 108064 caaaatgcaaccagaagctt 108083
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>dbj|AK148940.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120465J07
            product:unclassifiable, full insert sequence
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  cagaagcttccttcttccat 288
            ||||||||||||||||||||
Sbjct: 1929 cagaagcttccttcttccat 1948
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>gb|AF116641.1|AF116641 Homo sapiens PRO1617 mRNA, complete cds
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 attcctgtgtcatttcttca 306
           ||||||||||||||||||||
Sbjct: 928 attcctgtgtcatttcttca 947
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>gb|AC068274.5| Homo sapiens BAC clone RP11-119B15 from 2, complete sequence
          Length = 118955

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   cttccttcttccattcctgt 294
             ||||||||||||||||||||
Sbjct: 69020 cttccttcttccattcctgt 69039
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>emb|AL831764.16| Mouse DNA sequence from clone RP23-203A3 on chromosome 2, complete
              sequence
          Length = 195821

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    aagcttccttcttccattcc 291
              ||||||||||||||||||||
Sbjct: 159303 aagcttccttcttccattcc 159284
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>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete
             sequence
          Length = 145244

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 14659 cagaagcttccttcttccat 14640
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>emb|AL845360.10| Mouse DNA sequence from clone RP23-421L7 on chromosome 2, complete
              sequence
          Length = 196651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    cagaagcttccttcttccat 288
              ||||||||||||||||||||
Sbjct: 113584 cagaagcttccttcttccat 113603
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>dbj|AP000412.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K3G3
          Length = 24057

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  aaccagaagcttccttcttc 285
            ||||||||||||||||||||
Sbjct: 2599 aaccagaagcttccttcttc 2618
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>emb|AJ338005.1|HSA338005 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-IF13C
          Length = 709

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 caagatcacagcaaaagaac 172
           ||||||||||||||||||||
Sbjct: 494 caagatcacagcaaaagaac 513
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>gb|AC154739.2| Mus musculus BAC clone RP23-117B4 from 9, complete sequence
          Length = 196406

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 150    atccaagatcacagcaaaagaa-catccatcc 180
              ||||||||||||| |||||||| |||||||||
Sbjct: 114759 atccaagatcacatcaaaagaatcatccatcc 114790
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>gb|AC154630.2| Mus musculus BAC clone RP23-319C8 from 9, complete sequence
          Length = 182834

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 150    atccaagatcacagcaaaagaa-catccatcc 180
              ||||||||||||| |||||||| |||||||||
Sbjct: 181240 atccaagatcacatcaaaagaatcatccatcc 181271
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>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 279677

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ttttttatcacagaaacata 21
              ||||||||||||||||||||
Sbjct: 120374 ttttttatcacagaaacata 120393
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>emb|AL831756.8| Mouse DNA sequence from clone RP23-300P20 on chromosome 4, complete
             sequence
          Length = 164883

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cagaagcttccttcttccat 288
             ||||||||||||||||||||
Sbjct: 80777 cagaagcttccttcttccat 80796
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>emb|AL807400.9| Mouse DNA sequence from clone RP23-196A4 on chromosome 2, complete
              sequence
          Length = 220579

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     agaaacatacttaattgaag 32
              ||||||||||||||||||||
Sbjct: 216950 agaaacatacttaattgaag 216931
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>emb|AL132989.5|CNS01DTX Human chromosome 14 DNA sequence BAC C-2002H8 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 146740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   attcctgtgtcatttcttca 306
             ||||||||||||||||||||
Sbjct: 84644 attcctgtgtcatttcttca 84663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,671,613
Number of Sequences: 3902068
Number of extensions: 4671613
Number of successful extensions: 94989
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 94823
Number of HSP's gapped (non-prelim): 168
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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