ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
2dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
3dbj|AK060837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 4e-53
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 202 6e-49
5emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 202 6e-49
6gb|BT019203.1| Zea mays clone Contig876.F mRNA sequence 92 1e-15
7gb|BT018365.1| Zea mays clone EL01N0311E09.c mRNA sequence 92 1e-15
8gb|AY103815.1| Zea mays PCO096873 mRNA sequence 72 1e-09
9gb|BT013018.1| Lycopersicon esculentum clone 114256R, mRNA sequence 64 3e-07
10ref|NM_115399.2| Arabidopsis thaliana oxidoreductase, acting on ... 62 1e-06
11dbj|AK222082.1| Arabidopsis thaliana mRNA for 2-oxoglutarate deh... 62 1e-06
12gb|BT004643.1| Arabidopsis thaliana At3g55410 gene, complete cds 62 1e-06
13ref|XM_479634.1| Oryza sativa (japonica cultivar-group), mRNA 56 8e-05
14dbj|AK100482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
15dbj|AK059174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
16ref|NM_125972.3| Arabidopsis thaliana oxidoreductase, acting on ... 54 3e-04
17gb|AY096631.1| Arabidopsis thaliana putative 2-oxoglutarate dehy... 54 3e-04
18gb|AY074374.1| Arabidopsis thaliana putative 2-oxoglutarate dehy... 54 3e-04
19emb|AJ223802.1|ART223802 Arabidopsis thaliana mRNA for 2-oxoglut... 54 3e-04
20emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 48 0.020
21gb|AY160679.1| Bartonella vinsonii subsp. berkhoffii alpha-ketog... 44 0.31
22gb|AC040975.8| Homo sapiens chromosome 8, clone RP11-662B19, com... 42 1.2
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
24dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
25gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, com... 40 4.9
26gb|BT018310.1| Zea mays clone EL01T0206H09.c mRNA sequence 40 4.9
27gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CI... 40 4.9
28emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chro... 40 4.9
29emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BA... 40 4.9
30gb|AC105081.4| Homo sapiens chromosome 8, clone CTC-788C1, compl... 40 4.9
31gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484... 40 4.9
32dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.9
33gb|AY104202.1| Zea mays PCO125624 mRNA sequence 40 4.9
34dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.9
35dbj|AB023293.1| Bacillus thuringiensis gene for 94kDa mosquitoci... 40 4.9 
>dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N21, full
            insert sequence
          Length = 3612

 Score =  216 bits (109), Expect = 4e-53
 Identities = 216/254 (85%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 3333 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 3274

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || ||||||||| |||||||||||
Sbjct: 3273 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 3214

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 3213 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 3154

                                                                        
Query: 294  cggggattgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||       |||||||| ||||| ||||||||||||||||||
Sbjct: 3153 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 3094

                          
Query: 354  tcagcatttggata 367
            || |||||||||||
Sbjct: 3093 tcggcatttggata 3080



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 3415 gattattcaccaaatggctg 3396
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>dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O03, full
            insert sequence
          Length = 3581

 Score =  216 bits (109), Expect = 4e-53
 Identities = 216/254 (85%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 3379 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 3320

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || ||||||||| |||||||||||
Sbjct: 3319 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 3260

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 3259 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 3200

                                                                        
Query: 294  cggggattgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||       |||||||| ||||| ||||||||||||||||||
Sbjct: 3199 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 3140

                          
Query: 354  tcagcatttggata 367
            || |||||||||||
Sbjct: 3139 tcggcatttggata 3126



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 3461 gattattcaccaaatggctg 3442
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>dbj|AK060837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C11, full
            insert sequence
          Length = 1546

 Score =  216 bits (109), Expect = 4e-53
 Identities = 216/254 (85%)
 Strand = Plus / Minus

                                                                        
Query: 114  ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
            ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 1314 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 1255

                                                                        
Query: 174  gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggccctt 233
            |||||||||||||||||||| | ||| |||||||| || ||||||||| |||||||||||
Sbjct: 1254 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 1195

                                                                        
Query: 234  ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
            || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 1194 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 1135

                                                                        
Query: 294  cggggattgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatc 353
            || |||||||||||| | ||       |||||||| ||||| ||||||||||||||||||
Sbjct: 1134 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 1075

                          
Query: 354  tcagcatttggata 367
            || |||||||||||
Sbjct: 1074 tcggcatttggata 1061



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gattattcaccaaatggctg 48
            ||||||||||||||||||||
Sbjct: 1396 gattattcaccaaatggctg 1377
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  202 bits (102), Expect = 6e-49
 Identities = 209/247 (84%)
 Strand = Plus / Minus

                                                                            
Query: 114      ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
                ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 19193103 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 19193044

                                                                            
Query: 174      gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggccctt 233
                |||||||||||||||||||| | ||| |||||||| || ||||||||| |||||||||||
Sbjct: 19193043 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 19192984

                                                                            
Query: 234      ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
                || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 19192983 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 19192924

                                                                            
Query: 294      cggggattgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatc 353
                || |||||||||||| | ||       |||||||| ||||| ||||||||||||||||||
Sbjct: 19192923 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 19192864

                       
Query: 354      tcagcat 360
                || ||||
Sbjct: 19192863 tcggcat 19192857



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 29       gattattcaccaaatggctg 48
                ||||||||||||||||||||
Sbjct: 19193185 gattattcaccaaatggctg 19193166
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score =  202 bits (102), Expect = 6e-49
 Identities = 209/247 (84%)
 Strand = Plus / Minus

                                                                          
Query: 114    ctacacgttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcg 173
              ||||| |||||||| || || ||||| |||||| ||||||| ||||||| ||| ||||||
Sbjct: 126625 ctacaggttcaaaatggagagttgatagggtctcgctgcagtgccttctgcacaagctcg 126566

                                                                          
Query: 174    gtttgctcctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggccctt 233
              |||||||||||||||||||| | ||| |||||||| || ||||||||| |||||||||||
Sbjct: 126565 gtttgctcctgcacatggacggagtagaaacctgttgcggtggctgcagatggggccctt 126506

                                                                          
Query: 234    ccgacgtacttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagc 293
              || ||||| ||||| || |||||  |||| ||||| |||||||||||||||||||| || 
Sbjct: 126505 ccaacgtatttgatgtcgtctatcgtgccccgaccaagcgccctcatcgcggtcaggagg 126446

                                                                          
Query: 294    cggggattgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatc 353
              || |||||||||||| | ||       |||||||| ||||| ||||||||||||||||||
Sbjct: 126445 cgaggattgatgtagctgtacgcccccatgttcatgggttcctcttggcaccaaacaatc 126386

                     
Query: 354    tcagcat 360
              || ||||
Sbjct: 126385 tcggcat 126379



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gattattcaccaaatggctg 48
              ||||||||||||||||||||
Sbjct: 126707 gattattcaccaaatggctg 126688
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>gb|BT019203.1| Zea mays clone Contig876.F mRNA sequence
          Length = 703

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 195/247 (78%)
 Strand = Plus / Minus

                                                                       
Query: 121 ttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcggtttgct 180
           |||| |||||| | |||||||||||  ||||||| ||||| | ||| ||||| || ||||
Sbjct: 468 ttcagaacgggtagttgatggggtcgcgctgcagggccttttgcaccagctccgtctgct 409

                                                                       
Query: 181 cctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggcccttccgacgt 240
           ||||||| || || | ||| || || ||||| || || ||  | |||||||| |||||||
Sbjct: 408 cctgcacgtgcaccgagtagaagcccgtagcagtagcagccgacggggccctgccgacgt 349

                                                                       
Query: 241 acttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagccggggat 300
           ||||||| || || ||||  ||||| || || ||| |||| || |||||||||||||  |
Sbjct: 348 acttgatgtcctcgatgccaccacggcccagagccttcattgccgtcagcagccgggcgt 289

                                                                       
Query: 301 tgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatctcagcat 360
           |||||||| | ||       ||||||||||| || || |||||||| || ||||||||||
Sbjct: 288 tgatgtagctgtacgctcccatgttcatcggctcctcctggcaccacacgatctcagcat 229

                  
Query: 361 ttggata 367
           |||||||
Sbjct: 228 ttggata 222
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>gb|BT018365.1| Zea mays clone EL01N0311E09.c mRNA sequence
          Length = 674

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 195/247 (78%)
 Strand = Plus / Minus

                                                                       
Query: 121 ttcaaaacggggacttgatggggtctggctgcagcgccttcttcacgagctcggtttgct 180
           |||| |||||| | |||||||||||  ||||||| ||||| | ||| ||||| || ||||
Sbjct: 470 ttcagaacgggtagttgatggggtcgcgctgcagggccttttgcaccagctccgtctgct 411

                                                                       
Query: 181 cctgcacatggacagtgtaaaaacctgtagctgtggctgcaaatggggcccttccgacgt 240
           ||||||| || || | ||| || || ||||| || || ||  | |||||||| |||||||
Sbjct: 410 cctgcacgtgcaccgagtagaagcccgtagcagtagcagccgacggggccctgccgacgt 351

                                                                       
Query: 241 acttgatatcatctatgctgccacgaccgagcgccctcatcgcggtcagcagccggggat 300
           ||||||| || || ||||  ||||| || || ||| |||| || |||||||||||||  |
Sbjct: 350 acttgatgtcctcgatgccaccacggcccagagccttcattgccgtcagcagccgggcgt 291

                                                                       
Query: 301 tgatgtaggtatannnnnnnatgttcatcggttcttcttggcaccaaacaatctcagcat 360
           |||||||| | ||       ||||||||||| || || |||||||| || ||||||||||
Sbjct: 290 tgatgtagctgtacgctcccatgttcatcggctcctcctggcaccacacgatctcagcat 231

                  
Query: 361 ttggata 367
           |||||||
Sbjct: 230 ttggata 224
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>gb|AY103815.1| Zea mays PCO096873 mRNA sequence
          Length = 1431

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 182/233 (78%)
 Strand = Plus / Minus

                                                                        
Query: 135  ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatggaca 194
            |||| ||||||  ||||||||||||||| ||| ||||| || ||||||||||| || || 
Sbjct: 1116 ttgagggggtcgcgctgcagcgccttctgcaccagctccgtctgctcctgcacgtgcacc 1057

                                                                        
Query: 195  gtgtaaaaacctgtagctgtggctgcaaatggggcccttccgacgtacttgatatcatct 254
            | ||| || || || || || || ||  | |||||||| |||||||||||||| || || 
Sbjct: 1056 gagtagaagcccgtcgcggtagcagccgacggggccctgccgacgtacttgatgtcctcg 997

                                                                        
Query: 255  atgctgccacgaccgagcgccctcatcgcggtcagcagccggggattgatgtaggtatan 314
            ||||  || || || ||  || ||||||| ||||||| ||| || ||||||||| | || 
Sbjct: 996  atgccaccccggcccagaaccttcatcgccgtcagcaaccgcgggttgatgtagctgtat 937

                                                                 
Query: 315  nnnnnnatgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
                  ||||||||||| || ||||||||||| || ||||| |||||||||||
Sbjct: 936  gctcccatgttcatcggctcctcttggcaccacacgatctcggcatttggata 884
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>gb|BT013018.1| Lycopersicon esculentum clone 114256R, mRNA sequence
          Length = 3457

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttgg 364
            |||||||| || ||||||||||||||||||||||| ||||||||
Sbjct: 3017 atgttcattggctcttcttggcaccaaacaatctctgcatttgg 2974
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>ref|NM_115399.2| Arabidopsis thaliana oxidoreductase, acting on the aldehyde or oxo
            group of donors, disulfide as acceptor / oxoglutarate
            dehydrogenase (succinyl-tra> AT3G55410 mRNA, complete cds
          Length = 3494

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||  ||||||||||||||||| ||||| |||||||||||
Sbjct: 2998 atgttcatcgcctcttcttggcaccaaacgatctccgcatttggata 2952
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>dbj|AK222082.1| Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase, E1
           subunit - like protein, complete cds, clone:
           RAFL22-83-G07
          Length = 869

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 321 atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
           ||||||||||  ||||||||||||||||| ||||| |||||||||||
Sbjct: 458 atgttcatcgcctcttcttggcaccaaacgatctccgcatttggata 412
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>gb|BT004643.1| Arabidopsis thaliana At3g55410 gene, complete cds
          Length = 3054

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||  ||||||||||||||||| ||||| |||||||||||
Sbjct: 2864 atgttcatcgcctcttcttggcaccaaacgatctccgcatttggata 2818
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>ref|XM_479634.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3554

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 324  ttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||| ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 3126 ttcatgggttcctcttggcaccagacaatctccgcatttggata 3083
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>dbj|AK100482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097A04, full
            insert sequence
          Length = 3554

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 324  ttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||| ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 3126 ttcatgggttcctcttggcaccagacaatctccgcatttggata 3083
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>dbj|AK059174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F04, full
            insert sequence
          Length = 1789

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 324  ttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||| ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1318 ttcatgggttcctcttggcaccagacaatctccgcatttggata 1275
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>ref|NM_125972.3| Arabidopsis thaliana oxidoreductase, acting on the aldehyde or oxo
            group of donors, disulfide as acceptor / oxoglutarate
            dehydrogenase (succinyl-tra> AT5G65750 mRNA, complete cds
          Length = 3461

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 3017 atgttcatcggctcttcttgacaccacacgatctctgcatttggata 2971
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>gb|AY096631.1| Arabidopsis thaliana putative 2-oxoglutarate dehydrogenase E1
            component (At5g65750) mRNA, complete cds
          Length = 3109

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 2876 atgttcatcggctcttcttgacaccacacgatctctgcatttggata 2830
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>gb|AY074374.1| Arabidopsis thaliana putative 2-oxoglutarate dehydrogenase E1
            component (At5g65750) mRNA, complete cds
          Length = 3450

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 2994 atgttcatcggctcttcttgacaccacacgatctctgcatttggata 2948
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>emb|AJ223802.1|ART223802 Arabidopsis thaliana mRNA for 2-oxoglutarate dehydrogenase E1 subunit
          Length = 3362

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 321  atgttcatcggttcttcttggcaccaaacaatctcagcatttggata 367
            ||||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 2965 atgttcatcggctcttcttgacaccacacgatctctgcatttggata 2919
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>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 321   atgttcatcggttcttcttggcaccaaacaatctcagcat 360
             ||||||||||  ||||||||||||||||| ||||| ||||
Sbjct: 28012 atgttcatcgcctcttcttggcaccaaacgatctccgcat 27973
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>gb|AY160679.1| Bartonella vinsonii subsp. berkhoffii alpha-ketoglutarate
           dehydrogenase (sucA) gene, partial cds; dihydrolipoamide
           succinyltransferase (sucB) gene, complete cds; and
           dihydrolipoamide dehydrogenase (lpdA) gene, partial cds
          Length = 3357

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 330 ggttcttcttggcaccaaacaa 351
           ||||||||||||||||||||||
Sbjct: 654 ggttcttcttggcaccaaacaa 633
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>gb|AC040975.8| Homo sapiens chromosome 8, clone RP11-662B19, complete sequence
          Length = 199112

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 51    atttaaacctgttgtttttct 71
             |||||||||||||||||||||
Sbjct: 47832 atttaaacctgttgtttttct 47812
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 324      ttcatcggttcttcttggcaccaaacaatctcagcat 360
                ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 29608413 ttcatgggttcctcttggcaccagacaatctccgcat 29608377
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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0627E10
          Length = 163388

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 324    ttcatcggttcttcttggcaccaaacaatctcagcat 360
              ||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 135085 ttcatgggttcctcttggcaccagacaatctccgcat 135049
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>gb|AC121303.24| Mus musculus chromosome 8, clone RP23-335A5, complete sequence
          Length = 205158

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    ctgcacatggacagtgtaaaaacc 205
              |||||||| |||||||||||||||
Sbjct: 166554 ctgcacatagacagtgtaaaaacc 166577
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>gb|BT018310.1| Zea mays clone EL01T0206H09.c mRNA sequence
          Length = 817

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 135 ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatg 190
           ||||| || |||| |||||| ||||||||||| ||||| |  ||||||||| ||||
Sbjct: 643 ttgatcggctctgcctgcagtgccttcttcactagctctgactgctcctgcgcatg 588
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>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete
            sequence
          Length = 259474

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  ggctgcaaatggggcccttc 234
            ||||||||||||||||||||
Sbjct: 5890 ggctgcaaatggggcccttc 5871
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>emb|AL590426.6| Human DNA sequence from clone RP11-354K4 on chromosome 6 Contains novel
              pseudogene, complete sequence
          Length = 204235

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     tcatggctatgcaaagaacc 114
              ||||||||||||||||||||
Sbjct: 122766 tcatggctatgcaaagaacc 122747
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>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project)
          Length = 118086

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 321   atgttcatcggttcttcttggcaccaaacaatctcagcat 360
             ||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 59680 atgttcatcggctcttcttgacaccacacgatctctgcat 59719
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>gb|AC105081.4| Homo sapiens chromosome 8, clone CTC-788C1, complete sequence
          Length = 158605

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    ctgtggctgcaaatggggcc 230
              ||||||||||||||||||||
Sbjct: 100390 ctgtggctgcaaatggggcc 100371
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>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence
          Length = 195342

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   ggctgcaaatggggcccttc 234
             ||||||||||||||||||||
Sbjct: 70317 ggctgcaaatggggcccttc 70336
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>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24
          Length = 84440

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 321   atgttcatcggttcttcttggcaccaaacaatctcagcat 360
             ||||||||||| |||||||| ||||| || ||||| ||||
Sbjct: 60127 atgttcatcggctcttcttgacaccacacgatctctgcat 60088
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>gb|AY104202.1| Zea mays PCO125624 mRNA sequence
          Length = 1720

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 135  ttgatggggtctggctgcagcgccttcttcacgagctcggtttgctcctgcacatg 190
            ||||| || |||| |||||| ||||||||||| ||||| |  ||||||||| ||||
Sbjct: 1545 ttgatcggctctgcctgcagtgccttcttcactagctctgactgctcctgcgcatg 1490
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>dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1184D12
          Length = 176854

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   ctgtggctgcaaatggggcc 230
             ||||||||||||||||||||
Sbjct: 14344 ctgtggctgcaaatggggcc 14363
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>dbj|AB023293.1| Bacillus thuringiensis gene for 94kDa mosquitocidal toxin, complete
            cds
          Length = 3190

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   gctgtaatttaaacctgttg 64
            ||||||||||||||||||||
Sbjct: 1905 gctgtaatttaaacctgttg 1886


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,766,957
Number of Sequences: 3902068
Number of extensions: 2766957
Number of successful extensions: 48624
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48535
Number of HSP's gapped (non-prelim): 87
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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