>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 340    ttcaaagctatcttgttctgcaggatcctaga 371
              |||| |||||||||||||||||||||||||||
Sbjct: 155524 ttcacagctatcttgttctgcaggatcctaga 155493



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                   
Query: 91     gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 143
              |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 155782 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 155731

>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 340   ttcaaagctatcttgttctgcaggatcctaga 371
             |||| |||||||||||||||||||||||||||
Sbjct: 27258 ttcacagctatcttgttctgcaggatcctaga 27227



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                  
Query: 91    gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 143
             |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 27516 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 27465

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 340      ttcaaagctatcttgttctgcaggatcctaga 371
                |||| |||||||||||||||||||||||||||
Sbjct: 20483779 ttcacagctatcttgttctgcaggatcctaga 20483748



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                     
Query: 91       gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 143
                |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 20484037 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 20483986

>dbj|AK070104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045K24, full
            insert sequence
          Length = 3603

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 340  ttcaaagctatcttgttctgcaggatcctaga 371
            |||| |||||||||||||||||||||||||||
Sbjct: 3338 ttcacagctatcttgttctgcaggatcctaga 3307



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 46/53 (86%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                 
Query: 91   gttcttcagctaaaagctcaaatttatttcaggtatttacagcgttctaggta 143
            |||| ||||| |||||||| | |||||||||||||| ||||  ||||||||||
Sbjct: 3596 gttcatcagccaaaagctcca-tttatttcaggtatatacaatgttctaggta 3545

>emb|AL662853.16| Mouse DNA sequence from clone RP23-293J16 on chromosome 11 Contains the
              Kremen gene for kringle containing transmembrane protein,
              the 3' end of a novel gene and a CpG island, complete
              sequence
          Length = 198703

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 233    aaagtggtggtggttgtggtag 254
              ||||||||||||||||||||||
Sbjct: 121527 aaagtggtggtggttgtggtag 121548

>emb|AL671492.12| Mouse DNA sequence from clone RP23-286H11 on chromosome X, complete
              sequence
          Length = 202638

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 336    caggttcaaagctatcttgttc 357
              ||||||||||||||||||||||
Sbjct: 136603 caggttcaaagctatcttgttc 136582

>ref|XM_414507.1| PREDICTED: Gallus gallus similar to Gamma-aminobutyric-acid receptor
            pi subunit precursor (GABA(A) receptor) (LOC416174), mRNA
          Length = 2433

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 141  gtagtagtaattcttaaggca 161
            |||||||||||||||||||||
Sbjct: 1562 gtagtagtaattcttaaggca 1542

>ref|XM_883508.1| Leishmania major strain Friedlin hypothetical protein (L7610.04)
            partial mRNA
          Length = 5679

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 236  gtggtggtggttgtggtagcg 256
            |||||||||||||||||||||
Sbjct: 1609 gtggtggtggttgtggtagcg 1589

>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 236    gtggtggtggttgtggtagcg 256
              |||||||||||||||||||||
Sbjct: 130668 gtggtggtggttgtggtagcg 130688

>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete
             sequence
          Length = 209280

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    aggtggagaagcactccccta 63
             |||||||||||||||||||||
Sbjct: 55352 aggtggagaagcactccccta 55372

>gb|AC124821.5| Mus musculus chromosome 1, clone RP24-211L16, complete sequence
          Length = 185212

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    gtggtggtggttgtggtagc 255
              ||||||||||||||||||||
Sbjct: 148386 gtggtggtggttgtggtagc 148405

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      agcgttcttcagctaaaagc 107
               ||||||||||||||||||||
Sbjct: 3757404 agcgttcttcagctaaaagc 3757385

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 88      agcgttcttcagctaaaagc 107
               ||||||||||||||||||||
Sbjct: 3757566 agcgttcttcagctaaaagc 3757547

>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    gtaggtacacaacactacta 216
              ||||||||||||||||||||
Sbjct: 158708 gtaggtacacaacactacta 158689

>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence
          Length = 218644

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    agtggtggtggttgtggtag 254
              ||||||||||||||||||||
Sbjct: 151607 agtggtggtggttgtggtag 151588

>ref|XM_958114.1| Neurospora crassa OR74A hypothetical protein (NCU09483.1) partial
           mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 gtggtggtggttgtggtagc 255
           ||||||||||||||||||||
Sbjct: 35  gtggtggtggttgtggtagc 16

>ref|XM_329841.1| Neurospora crassa OR74A hypothetical protein (NCU09483.1) partial
           mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 gtggtggtggttgtggtagc 255
           ||||||||||||||||||||
Sbjct: 35  gtggtggtggttgtggtagc 16

>gb|AC160458.4| Mus musculus chromosome 5, clone RP23-14C20, complete sequence
          Length = 253338

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   gacaaaagtggtggtggttgtggt 252
             |||||||||||||||||| |||||
Sbjct: 21919 gacaaaagtggtggtggtggtggt 21896

>gb|AC111117.15| Mus musculus chromosome 1, clone RP23-214P23, complete sequence
          Length = 201442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gtggtggtggttgtggtagc 255
              ||||||||||||||||||||
Sbjct: 191683 gtggtggtggttgtggtagc 191664

>gb|AC103615.8| Mus musculus chromosome 5, clone RP24-174D16, complete sequence
          Length = 201693

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    gacaaaagtggtggtggttgtggt 252
              |||||||||||||||||| |||||
Sbjct: 112043 gacaaaagtggtggtggtggtggt 112066

>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    taaaagctcaaatttatttc 120
              ||||||||||||||||||||
Sbjct: 542850 taaaagctcaaatttatttc 542831

>emb|BX842597.1| Neurospora crassa DNA linkage group II BAC clone B22K18
          Length = 75214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   gtggtggtggttgtggtagc 255
             ||||||||||||||||||||
Sbjct: 48605 gtggtggtggttgtggtagc 48624

>emb|BX842596.1| Neurospora crassa DNA linkage group II BAC clone B10K17
          Length = 77292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   gtggtggtggttgtggtagc 255
             ||||||||||||||||||||
Sbjct: 69240 gtggtggtggttgtggtagc 69221

>emb|BX324164.15| Zebrafish DNA sequence from clone DKEY-14D8 in linkage group 4
            Contains the gene for a novel protein similar to
            vertebrate selenoprotein family, the gene for a novel
            protein similar to vertebrate vascular endothelial growth
            factor (VEGF), the gene for a novel protein similar to
            vertebrate mitogen-activated protein kinase family, the
            gene for a novel protein similar to vertebrate
            mitogen-activated protein kinase family, the gene for a
            novel protein similar to vertebrate scavenger receptor
            protein, two genes for novel proteins similar to
            vertebrate protein deleted in malignant brain tumors 1,
            fifteen novel genes and three CpG islands, complete
            sequence
          Length = 264155

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gctaaaagctcaaatttatt 118
            ||||||||||||||||||||
Sbjct: 5966 gctaaaagctcaaatttatt 5947

>gb|AC157489.18| Medicago truncatula clone mth2-70e3, complete sequence
          Length = 154580

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 225    aggtgacaaaagtggtggtggttg 248
              ||||||||||||| ||||||||||
Sbjct: 146739 aggtgacaaaagttgtggtggttg 146762

>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    aaagtggtggtggttgtggt 252
              ||||||||||||||||||||
Sbjct: 336009 aaagtggtggtggttgtggt 335990

>gb|AC146149.2| Pan troglodytes BAC clone RP43-37G13 from chromosome 7, complete sequence
          Length = 197136

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    agtggtggtggttgtggtag 254
              ||||||||||||||||||||
Sbjct: 112105 agtggtggtggttgtggtag 112086

>emb|AL732612.28| Mouse DNA sequence from clone RP23-31L20 on chromosome 11, complete
              sequence
          Length = 145244

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    gaggatggagacctggggtt 389
              ||||||||||||||||||||
Sbjct: 133294 gaggatggagacctggggtt 133313

>emb|BX510916.7| Zebrafish DNA sequence from clone DKEY-208B17 in linkage group 5,
              complete sequence
          Length = 174866

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    acacaacactactacggtta 222
              ||||||||||||||||||||
Sbjct: 126569 acacaacactactacggtta 126588

>gb|AC102608.14| Mus musculus chromosome 3, clone RP23-402L6, complete sequence
          Length = 185014

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    agtggtggtggttgtggtag 254
              ||||||||||||||||||||
Sbjct: 124060 agtggtggtggttgtggtag 124079

>gb|AC099719.9| Mus musculus chromosome 7, clone RP23-394F19, complete sequence
          Length = 215718

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 197  gtaggtacacaacactacta 216
            ||||||||||||||||||||
Sbjct: 6186 gtaggtacacaacactacta 6167

>gb|AC171647.3| Rhesus Macaque  BAC CH250-482O21 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 123862

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   gtagtaattcttaaggcagt 163
             ||||||||||||||||||||
Sbjct: 82246 gtagtaattcttaaggcagt 82265

>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14,
              complete sequence
          Length = 164299

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    acacaacactactacggtta 222
              ||||||||||||||||||||
Sbjct: 111136 acacaacactactacggtta 111155

>emb|AL935171.9| Mouse DNA sequence from clone RP23-286N21 on chromosome 2, complete
            sequence
          Length = 58489

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  agtggtggtggttgtggtag 254
            ||||||||||||||||||||
Sbjct: 7634 agtggtggtggttgtggtag 7615

>emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in linkage group 5,
              complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    acacaacactactacggtta 222
              ||||||||||||||||||||
Sbjct: 113020 acacaacactactacggtta 113039

>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13,
            complete sequence
          Length = 96887

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  acacaacactactacggtta 222
            ||||||||||||||||||||
Sbjct: 7293 acacaacactactacggtta 7312


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,186,967
Number of Sequences: 3902068
Number of extensions: 3186967
Number of successful extensions: 81868
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81726
Number of HSP's gapped (non-prelim): 142
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)