ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription a... 30 1.8
2SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur... 30 2.3
3RNFB_BUCAI (P57214) Electron transport complex protein rnfB 30 3.0
4PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5) 29 5.1
5PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5) 29 5.1
6PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.... 29 5.1
7LUZP1_HUMAN (Q86V48) Leucine zipper protein 1 28 6.7
8DOF1A_ARATH (Q9SEZ3) Dof zinc finger protein DOF1.10 (AtDOF1.10)... 28 6.7

>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 257 LQTIINTHVTSQKYTAQNWLLLTSQFLCGETPK 355
           L TII+ H T  K T +NW L+  ++ C  + K
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161



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>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +1

Query: 121 NNNIGGDTKTSHLTEEEKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIY 300
           +++    T +S  + +E     S  GSS S AA+   PK++A  + P N+  SC  A   
Sbjct: 245 SSSTSSSTSSSTSSTQETAATTS-EGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAV 301

Query: 301 SSKLAV 318
           SS L +
Sbjct: 302 SSDLTL 307



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>RNFB_BUCAI (P57214) Electron transport complex protein rnfB|
          Length = 167

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 147 FCVSSNVIISFQFLHNL*QCTVVLEYSVGCNISCQHCRSRKLDLR 13
           FC    ++ +  F+H     TV+ E+  GCNI   HC +  ++++
Sbjct: 122 FCPVDAIVGAPNFIH-----TVLQEFCTGCNICLLHCPTNCIEIK 161



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>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -2

Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 167
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)|
          Length = 505

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -2

Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 167
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)|
          Length = 505

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -2

Query: 319 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 167
           Q+ +     L+ ++S DY +   KKPW+     + P  C S+ ++   ++L
Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457



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>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
 Frame = +1

Query: 145 KTSHL-------TEEEKKKPCSF-PGSSKS*AAVAERPKSMASSFPPNNNQHS 279
           K SH+       T+E KK    F PGSS+S    +    S+ S +PP   +HS
Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485



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>DOF1A_ARATH (Q9SEZ3) Dof zinc finger protein DOF1.10 (AtDOF1.10) (H-protein|
           promoter-binding factor 2b)
          Length = 399

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 6   KIILDPVFDSYNADTIYCNRQNTPKPQYIVTNCVRTEKK**HWR---RHKNIPFDRRRKK 176
           K+I  P  +S N    Y N  N  +P+Y   NC R      +W      +N+P    R+K
Sbjct: 130 KLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQR------YWTAGGSMRNVPVGSGRRK 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,865,795
Number of Sequences: 219361
Number of extensions: 1312115
Number of successful extensions: 3696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3696
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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