ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl32b12 |
|---|---|
| Clone Library Name | barley_pub |
>SPIKE_CVPRT (Q01977) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1447 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD+ T + C+ V H+ CK C V+ + Sbjct: 541 GYGQPIASTLSNITLPMQDHNTD-VYCIRSDQFSVYVHSTCKSALWDNIFKRNCTDVLDA 599 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 600 TAVIKTGTCPFSFDKLNNYLTFNKFCL 626
>SPIKE_CVPPU (P07946) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1447 Score = 31.6 bits (70), Expect = 0.50 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD+ T + C+ V H+ CK C V+ + Sbjct: 541 GYGQPIASTLSNITLPMQDHNTD-VYCIRSDQFSVYVHSTCKSALWDNIFKRNCTDVLDA 599 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 600 TAVIKTGTCPFSFDKLNNYLTFNKFCL 626
>UL03_HHV11 (P10187) Protein UL3| Length = 235 Score = 31.2 bits (69), Expect = 0.65 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 Query: 25 LKKQRWVAKQKEKMQFVIQARKPRSYICRQHD 120 L K+ A+ +E+++ VIQ+RKPR Y R D Sbjct: 170 LCKRAHAARVREQLRVVIQSRKPRKYYTRSSD 201
>SPIKE_CVPR8 (P27655) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1225 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD T + CV V H+ CK C V+ + Sbjct: 319 GYGQPIASTLSNITLPMQDNNTD-VYCVRSDQFSVYVHSTCKSALWDNVFKRNCTDVLDA 377 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 378 TAVIKTGTCPFSFDKLNNYLTFNKFCL 404
>SPIKE_FIPV (P10033) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1452 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD T + C+ + V H+ CK C V+ + Sbjct: 546 GYGQPIASTLSNITLPMQDNNTD-VYCIRSNQFSVYVHSTCKSSLWDNIFNQDCTDVLEA 604 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 605 TAVIKTGTCPFSFDKLNNYLTFNKFCL 631
>SPIKE_CVCAE (Q65984) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1453 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD T + C+ + V H+ CK C V+ + Sbjct: 547 GYGQPIASTLSNITLPMQDNNTD-VYCIRSNRFSVYFHSTCKSSLWDDVFNSDCTDVLYA 605 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 606 TAVIKTGTCPFSFDKLNNYLTFNKFCL 632
>MYO9B_MOUSE (Q9QY06) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 2114 Score = 30.0 bits (66), Expect = 1.5 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = -2 Query: 210 HVRSHNSIGVPKTTKQCC*FVWLIQQHVLC 121 HV + + +P++ +QC ++WL+ + +LC Sbjct: 1591 HVFASYQVNIPQSCEQCLSYIWLMDKALLC 1620
>SPIKE_CVPMI (P33470) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1449 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD T + C+ V H+ CK C V+ + Sbjct: 543 GYGQPIASTLSNITLPMQDNNTD-VYCIRSDQFSVYVHSTCKSSLWDNVFKRNCTDVLDA 601 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 602 TAVIKTGTCPFSFDKLNNYLTFNKFCL 628
>MYO9B_RAT (Q63358) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 1980 Score = 30.0 bits (66), Expect = 1.5 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = -2 Query: 210 HVRSHNSIGVPKTTKQCC*FVWLIQQHVLC 121 HV + + +P++ +QC ++WL+ + +LC Sbjct: 1593 HVFASYQVNIPQSCEQCLSYIWLMDKALLC 1622
>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 2158 Score = 30.0 bits (66), Expect = 1.5 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = -2 Query: 210 HVRSHNSIGVPKTTKQCC*FVWLIQQHVLC 121 HV + + +P++ +QC ++WL+ + +LC Sbjct: 1633 HVFASYQVSIPQSCEQCLSYIWLMDKALLC 1662
>UL03_EHV1V (P84456) Gene 60 protein| Length = 212 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = +1 Query: 46 AKQ-KEKMQFVIQARKPRSYICRQHD 120 AKQ ++++Q VIQARKPR Y R D Sbjct: 152 AKQIRDQLQSVIQARKPRKYYTRSSD 177
>UL03_EHV1B (P28942) Gene 60 protein| Length = 212 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 1/26 (3%) Frame = +1 Query: 46 AKQ-KEKMQFVIQARKPRSYICRQHD 120 AKQ ++++Q VIQARKPR Y R D Sbjct: 152 AKQIRDQLQSVIQARKPRKYYTRSSD 177
>FURI1_XENLA (P29119) Furin-1 precursor (EC 3.4.21.75) (Paired basic amino acid| residue cleaving enzyme) (PACE) (Dibasic-processing enzyme) Length = 783 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +3 Query: 57 RENAVCNTSKETTLIHLQAA*HTTRAAESTTQINNIVW*SWAHQWSCATVRATGSPN 227 RE+ CN T I+ T + STTQ+ N+ W S A + AT ++G+ N Sbjct: 296 REHDSCNCDGYTNSIY-------TLSISSTTQMGNVPWYSEACSSTLATTYSSGNQN 345
>LAG3_CAEEL (Q09260) Protein lag-3 (Abnormal germ line proliferation protein 3)| (Abnormal cell lineage protein 3) Length = 490 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +1 Query: 7 DNNW*NLKKQRWVAKQKEKMQFVIQARKPRSYICRQHDTQHVLLNQPHKLTTLFGSLGH 183 + W ++Q W+ +Q+ +MQF +Q + Y +Q Q++++ Q H T + H Sbjct: 155 EEEWKRAQQQHWMGQQQPQMQFQMQ----QQYHSQQQ--QYIMMQQQHHHMTGMQQIHH 207
>SPIKE_CVPFS (P18450) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1449 Score = 28.9 bits (63), Expect = 3.2 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD + + C+ V H+ CK C V+ + Sbjct: 543 GYGQPIASTLSNITLPMQD-NNIDVYCIRSDQFSVYVHSTCKSALWDNVFKRNCTDVLDA 601 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 602 TAVIKTGTCPFSFDKLNNYLTFNKFCL 628
>SPIKE_CVPRM (P24413) Spike glycoprotein precursor (Peplomer protein) (E2)| Length = 1225 Score = 28.5 bits (62), Expect = 4.2 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 12/87 (13%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACK-----------CMSVV-S 86 G+G+P+A T++ + QD + CV V H+ CK C V+ + Sbjct: 319 GYGQPIASTLSNITLPMQDNNND-VYCVRSDQFSVYVHSTCKSVLWDNVFKRNCTDVLDA 377 Query: 85 LLVLQTAFSLFVWLPIAAFLNFTNCCL 5 V++T F + + +L F CL Sbjct: 378 TAVIKTGTCPFSFDKLNNYLTFNKFCL 404
>UL03_HHV2H (P28279) Nuclear phosphoprotein UL3| Length = 233 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 25 LKKQRWVAKQKEKMQFVIQARKPRSYICRQHD 120 L K+ A+ +E+++ VI++RKPR Y R D Sbjct: 168 LCKRANAAQVREQLRAVIRSRKPRKYYTRSSD 199
>UL03_HHV23 (P0C012) Nuclear phosphoprotein UL3| Length = 233 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +1 Query: 25 LKKQRWVAKQKEKMQFVIQARKPRSYICRQHD 120 L K+ A+ +E+++ VI++RKPR Y R D Sbjct: 168 LCKRANAAQVREQLRAVIRSRKPRKYYTRSSD 199
>LCR80_ARATH (P82789) Putative low-molecular-weight cysteine-rich protein LCR80| precursor Length = 122 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = -3 Query: 176 RLPNNVVNLCG*F-SSTCCVSCCLQMYERGFLACITNCIFSFCLATHRC 33 +L N + CG + CC C Q Y G C T FS CL + C Sbjct: 74 KLCNGGLGNCGESCNEQCCDRNCAQRYNGGHGYCNTLDDFSLCLCKYPC 122
>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor| Length = 2809 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/45 (33%), Positives = 18/45 (40%) Frame = +2 Query: 77 YKQGNHAHTFAGSMTHNTCC*INHTN*QHCLVVLGTPMELCDRTC 211 YK N F G TH TC N HC G ++ +R C Sbjct: 984 YKDVNECKVFPGLCTHGTC--RNTVGSFHCACAGGFALDAQERNC 1026
>ZSWM4_HUMAN (Q9H7M6) Zinc finger SWIM domain-containing protein 4| Length = 989 Score = 27.3 bits (59), Expect = 9.4 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -1 Query: 229 GFGEPVARTVAQLHWCAQDYQTMLLICVVDSAARVVCHAACKCMSVVSLLVLQTAF 62 GFGE + R +H CA+ T LL D A R+ A + L +L+TAF Sbjct: 530 GFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLALRA-------MRLPILETAF 578
>LCR59_ARATH (P82773) Putative low-molecular-weight cysteine-rich protein LCR59| precursor Length = 129 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = -3 Query: 128 CCVSCCLQMYERGFLACITNCIFSFCLATHRC 33 CC C Q Y G C T FSFC + C Sbjct: 98 CCDMNCAQKYIGGHGFCNTLGTFSFCQCEYPC 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,151,709 Number of Sequences: 219361 Number of extensions: 1070497 Number of successful extensions: 2634 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2633 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
