>gb|AC022120.7| Homo sapiens chromosome 5 clone CTC-570I13, complete sequence
          Length = 169513

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 5      aagacaacaattggtaaaatttaaaa 30
              ||||||| ||||||||||||||||||
Sbjct: 118245 aagacaaaaattggtaaaatttaaaa 118220

>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 12      caattggtaaaatttaaaaaa 32
               |||||||||||||||||||||
Sbjct: 1379192 caattggtaaaatttaaaaaa 1379212

>gb|AC132032.1| Homo sapiens 3 BAC RP11-4H14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 106938

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    caaacaaaaagagaaaatgca 68
             |||||||||||||||||||||
Sbjct: 48968 caaacaaaaagagaaaatgca 48988

>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence
          Length = 170896

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 145    ccacacaaattaacaacattgttt 168
              ||||||||||||| ||||||||||
Sbjct: 110396 ccacacaaattaaaaacattgttt 110373

>gb|AC004877.1| Homo sapiens PAC clone RP4-751H13 from 7, complete sequence
          Length = 128361

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    gtgcgtgcacacacccacaa 340
              ||||||||||||||||||||
Sbjct: 108662 gtgcgtgcacacacccacaa 108643

>gb|AC092666.2| Homo sapiens BAC clone RP11-545G3 from 7, complete sequence
          Length = 136934

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   ccaaacccttcttattaaag 241
             ||||||||||||||||||||
Sbjct: 67446 ccaaacccttcttattaaag 67465



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   ccaaacccttcttattaaag 241
             ||||||||||||||||||||
Sbjct: 64498 ccaaacccttcttattaaag 64517

>gb|AC006019.2| Homo sapiens PAC clone RP5-1048B16 from 7, complete sequence
          Length = 124615

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ccaaacccttcttattaaag 241
              ||||||||||||||||||||
Sbjct: 110168 ccaaacccttcttattaaag 110187



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ccaaacccttcttattaaag 241
              ||||||||||||||||||||
Sbjct: 107226 ccaaacccttcttattaaag 107245

>gb|U50068.2| Caenorhabditis elegans cosmid C01G5, complete sequence
          Length = 38627

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aattggtaaaatttaaaaaa 32
             ||||||||||||||||||||
Sbjct: 17391 aattggtaaaatttaaaaaa 17410

>emb|AL136301.21| Human DNA sequence from clone RP11-195L15 on chromosome 13 Contains
            the 5' end of the KPNA3 gene for karyopherin alpha 3
            (importin alpha 4), a novel gene and two CpG islands,
            complete sequence
          Length = 48730

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 46   gccaaacaaaaagagaaaatgcag 69
            |||||| |||||||||||||||||
Sbjct: 8639 gccaaaaaaaaagagaaaatgcag 8662

>emb|AL954336.3| Mouse DNA sequence from clone RP23-223H19 on chromosome 11 Contains a
             high mobility group box 1 (Hmgb1) pseudogene, a novel gene
             and two CpG islands, complete sequence
          Length = 117391

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    aaaaagagaaaatgcagttt 72
             ||||||||||||||||||||
Sbjct: 74301 aaaaagagaaaatgcagttt 74320

>gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 131894

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    acaattggtaaaatttaaaa 30
             ||||||||||||||||||||
Sbjct: 17914 acaattggtaaaatttaaaa 17933

>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 322   tgcgtgcacacacccacaacatca 345
             |||||||||||||||||| |||||
Sbjct: 24860 tgcgtgcacacacccacagcatca 24837

>gb|AC046144.15| Homo sapiens 3 BAC RP11-628J14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188840

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     acaattggtaaaatttaaaa 30
              ||||||||||||||||||||
Sbjct: 100876 acaattggtaaaatttaaaa 100895

>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome
          Length = 615980

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tggtaaaatttaaaaaagca 35
              ||||||||||||||||||||
Sbjct: 467126 tggtaaaatttaaaaaagca 467145

>gb|AC009122.8|AC009122 Homo sapiens chromosome 16 clone RP11-486B22, complete sequence
          Length = 170769

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ccaaacaaaaagagaaaatg 66
              ||||||||||||||||||||
Sbjct: 140446 ccaaacaaaaagagaaaatg 140427

>gb|AC150255.7| Aedes aegypti, clone XX-85K2, complete sequence
          Length = 164368

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    gcagtttgtaatacaagcaa 85
             ||||||||||||||||||||
Sbjct: 15224 gcagtttgtaatacaagcaa 15243

>gb|AC113075.9| Mus musculus chromosome 19, clone RP23-278F24, complete sequence
          Length = 171837

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    caaaaagagaaaatgcagtt 71
             ||||||||||||||||||||
Sbjct: 46279 caaaaagagaaaatgcagtt 46298

>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    cagacgtactgtacgccgcc 290
              ||||||||||||||||||||
Sbjct: 171671 cagacgtactgtacgccgcc 171690

>gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 97451

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ccaaacaaaaagagaaaatg 66
             ||||||||||||||||||||
Sbjct: 28439 ccaaacaaaaagagaaaatg 28458

>dbj|AP001496.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-835E18, complete
              sequence
          Length = 179358

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     aacaattggtaaaatttaaa 29
              ||||||||||||||||||||
Sbjct: 164384 aacaattggtaaaatttaaa 164365

>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073,
             complete sequence
          Length = 90077

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    aattggtaaaatttaaaaaa 32
             ||||||||||||||||||||
Sbjct: 76119 aattggtaaaatttaaaaaa 76138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,538,826
Number of Sequences: 3902068
Number of extensions: 4538826
Number of successful extensions: 111778
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111710
Number of HSP's gapped (non-prelim): 68
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)