ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in l... 44 0.33
2emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, c... 44 0.33
3gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence 42 1.3
4gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 42 1.3
5emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 42 1.3
6gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, compl... 42 1.3
7dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 42 1.3
8dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 42 1.3
9gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 42 1.3
10gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 42 1.3
11gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 42 1.3
12gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosom... 42 1.3
13dbj|AK032198.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.3
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
15dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 42 1.3
16dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 42 1.3
17dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
19emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 42 1.3
20emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 42 1.3
21gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, co... 40 5.1
22gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
23gb|U55857.1| Caenorhabditis elegans cosmid K08D10, complete sequ... 40 5.1
24gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 40 5.1
25ref|XM_786490.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.1
26gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, compl... 40 5.1
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
31gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 fr... 40 5.1
32gb|AC090967.4| Staphylococcus aureus strain NCTC 8325 clone saba... 40 5.1
33gb|AF463835.1| Oryza sativa (japonica cultivar-group) transgenic... 40 5.1
34dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
35dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
36dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
37dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
38dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
39gb|AF118839.1|AF118839 Staphylococcus aureus iron uptake regulat... 40 5.1
40dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
41dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
42dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
43gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequ... 40 5.1
44gb|AF095597.1|AF095597 Staphylococcus aureus strain ISP3 ferric ... 40 5.1
45dbj|AK115279.1| Ciona intestinalis cDNA, clone:cieg042k23, full ... 40 5.1 
>emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in linkage group 8,
             complete sequence
          Length = 120755

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 117   ctctctgcattgcactgtagcagaca 142
             ||||||||||||||||| ||||||||
Sbjct: 42586 ctctctgcattgcactgcagcagaca 42611
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>emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, complete sequence
          Length = 186380

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 117   ctctctgcattgcactgtagcagaca 142
             ||||||||||||||||| ||||||||
Sbjct: 96579 ctctctgcattgcactgcagcagaca 96604
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>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence
          Length = 257036

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   ttttctcaataaaatgtgggt 241
             |||||||||||||||||||||
Sbjct: 66808 ttttctcaataaaatgtgggt 66828
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 17      ttcatttcttgagacacacagtttt 41
               |||||||||||| ||||||||||||
Sbjct: 4059264 ttcatttcttgaaacacacagtttt 4059288
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20300 aaaaattactttcatgcatct 20280



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1564637 acagttttctcaataaaatg 1564656
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>gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, complete sequence
          Length = 107685

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   gaaccaacctctctgcattgc 129
             |||||||||||||||||||||
Sbjct: 51421 gaaccaacctctctgcattgc 51401
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20307 aaaaattactttcatgcatct 20287



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1613966 acagttttctcaataaaatg 1613985
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 18409 aaaaattactttcatgcatct 18389
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20323 aaaaattactttcatgcatct 20303



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1579068 acagttttctcaataaaatg 1579087
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20296 aaaaattactttcatgcatct 20276



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1518449 acagttttctcaataaaatg 1518468
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20323 aaaaattactttcatgcatct 20303



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1601889 acagttttctcaataaaatg 1601908
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>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete
             sequence
          Length = 156014

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   ttttctcaataaaatgtgggt 241
             |||||||||||||||||||||
Sbjct: 96949 ttttctcaataaaatgtgggt 96969
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>dbj|AK032198.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430411K07
            product:unclassifiable, full insert sequence
          Length = 3000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 221  ttttctcaataaaatgtgggt 241
            |||||||||||||||||||||
Sbjct: 1220 ttttctcaataaaatgtgggt 1200
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 284      aatgtgttgccacttaccact 304
                |||||||||||||||||||||
Sbjct: 11393642 aatgtgttgccacttaccact 11393622



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 214      tttacagttttctcaataaaatgt 237
                ||||| ||||||||||||||||||
Sbjct: 14656480 tttaccgttttctcaataaaatgt 14656457



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 214     tttacagttttctcaataaaatgt 237
               ||||| ||||||||||||||||||
Sbjct: 5900199 tttacggttttctcaataaaatgt 5900176
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
             strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20300 aaaaattactttcatgcatct 20280



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1584879 acagttttctcaataaaatg 1584898
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20306 aaaaattactttcatgcatct 20286



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1537554 acagttttctcaataaaatg 1537573
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0446G09
          Length = 146898

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 284  aatgtgttgccacttaccact 304
            |||||||||||||||||||||
Sbjct: 3162 aatgtgttgccacttaccact 3142
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>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 284   aatgtgttgccacttaccact 304
             |||||||||||||||||||||
Sbjct: 94153 aatgtgttgccacttaccact 94133
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20288 aaaaattactttcatgcatct 20268



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1647382 acagttttctcaataaaatg 1647401
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   aaaaattactttcatgcatct 368
             |||||||||||||||||||||
Sbjct: 20282 aaaaattactttcatgcatct 20262



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 217     acagttttctcaataaaatg 236
               ||||||||||||||||||||
Sbjct: 1488162 acagttttctcaataaaatg 1488181
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>gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, complete sequence
          Length = 178435

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     attatctttttcatttcttg 27
             ||||||||||||||||||||
Sbjct: 41466 attatctttttcatttcttg 41485
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>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12,
             complete sequence
          Length = 139627

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             ||||| ||||||||||||||||||
Sbjct: 96057 tttacggttttctcaataaaatgt 96080
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>gb|U55857.1| Caenorhabditis elegans cosmid K08D10, complete sequence
          Length = 32640

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 327   ctaacaactcagacatgttgcaaaaatt 354
             |||| |||||||| ||||||||||||||
Sbjct: 24008 ctaaaaactcagaaatgttgcaaaaatt 24035
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>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aattatctttttcatttctt 26
             ||||||||||||||||||||
Sbjct: 56647 aattatctttttcatttctt 56628
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>ref|XM_786490.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC586719 (LOC586719), mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  agacataagactaagttcct 157
            ||||||||||||||||||||
Sbjct: 1182 agacataagactaagttcct 1201
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>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
          Length = 177958

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tctgtcctttacagttttct 226
              ||||||||||||||||||||
Sbjct: 160057 tctgtcctttacagttttct 160038
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 214     tttacagttttctcaataaaatgt 237
               ||||| ||||||||||||||||||
Sbjct: 9157990 tttaccgttttctcaataaaatgt 9158013
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 214      tttacagttttctcaataaaatgt 237
                ||||| ||||||||||||||||||
Sbjct: 25464003 tttacggttttctcaataaaatgt 25463980



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 214      tttacagttttctcaataaaatgt 237
                ||||| ||||||||||||||||||
Sbjct: 25458632 tttacggttttctcaataaaatgt 25458609
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 214      tttacagttttctcaataaaatgt 237
                ||||| ||||||||||||||||||
Sbjct: 11651622 tttacggttttctcaataaaatgt 11651645
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 214      tttacagttttctcaataaaatgt 237
                ||||| ||||||||||||||||||
Sbjct: 22749742 tttactgttttctcaataaaatgt 22749765



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 214     tttacagttttctcaataaaatgt 237
               |||| |||||||||||||||||||
Sbjct: 8540038 tttagagttttctcaataaaatgt 8540061
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>gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 from the MHC region,
             complete sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     attatctttttcatttcttg 27
             ||||||||||||||||||||
Sbjct: 14851 attatctttttcatttcttg 14870
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>gb|AC090967.4| Staphylococcus aureus strain NCTC 8325 clone sabac-125, complete
             sequence
          Length = 27650

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acagttttctcaataaaatg 236
             ||||||||||||||||||||
Sbjct: 20687 acagttttctcaataaaatg 20706
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>gb|AF463835.1| Oryza sativa (japonica cultivar-group) transgenic plant p0822L
           integrated T-DNA(Ds), flanking sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 214 tttacagttttctcaataaaatgt 237
           |||| |||||||||||||||||||
Sbjct: 73  tttagagttttctcaataaaatgt 50
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0009N02
          Length = 121142

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 214  tttacagttttctcaataaaatgt 237
            |||| |||||||||||||||||||
Sbjct: 9361 tttagagttttctcaataaaatgt 9384
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>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0019I19
          Length = 164483

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    tttacagttttctcaataaaatgt 237
              ||||| ||||||||||||||||||
Sbjct: 138012 tttacggttttctcaataaaatgt 137989



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    tttacagttttctcaataaaatgt 237
              ||||| ||||||||||||||||||
Sbjct: 132641 tttacggttttctcaataaaatgt 132618
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             ||||| ||||||||||||||||||
Sbjct: 42647 tttacggttttctcaataaaatgt 42624
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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             ||||| ||||||||||||||||||
Sbjct: 49478 tttaccgttttctcaataaaatgt 49455
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>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1559_F09
          Length = 87792

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             ||||| ||||||||||||||||||
Sbjct: 74873 tttacggttttctcaataaaatgt 74850
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>gb|AF118839.1|AF118839 Staphylococcus aureus iron uptake regulatory protein (fur) gene,
           complete cds; and site-specific recombinase (XerD) gene,
           partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 acagttttctcaataaaatg 236
           ||||||||||||||||||||
Sbjct: 206 acagttttctcaataaaatg 187
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>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             |||| |||||||||||||||||||
Sbjct: 89308 tttagagttttctcaataaaatgt 89331
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>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0046O12
          Length = 128223

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 214    tttacagttttctcaataaaatgt 237
              ||||| ||||||||||||||||||
Sbjct: 108538 tttactgttttctcaataaaatgt 108561
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>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 214   tttacagttttctcaataaaatgt 237
             ||||| ||||||||||||||||||
Sbjct: 93484 tttaccgttttctcaataaaatgt 93507
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>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   ttgcaaaaattactttcatg 363
             ||||||||||||||||||||
Sbjct: 94492 ttgcaaaaattactttcatg 94473
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>gb|AF095597.1|AF095597 Staphylococcus aureus strain ISP3 ferric uptake regulator homolog
           (furC) gene, complete cds
          Length = 600

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 acagttttctcaataaaatg 236
           ||||||||||||||||||||
Sbjct: 33  acagttttctcaataaaatg 14
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>dbj|AK115279.1| Ciona intestinalis cDNA, clone:cieg042k23, full insert sequence
          Length = 1878

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  ttttcatttcttgagacaca 34
           ||||||||||||||||||||
Sbjct: 887 ttttcatttcttgagacaca 868


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,757,640
Number of Sequences: 3902068
Number of extensions: 3757640
Number of successful extensions: 73216
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72764
Number of HSP's gapped (non-prelim): 452
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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