ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_183696.1| Oryza sativa (japonica cultivar-group), predic... 260 4e-66
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
3dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
4dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
5dbj|AK103288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
6dbj|AK062171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
7ref|NM_183994.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
8dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
9dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
10dbj|AK069585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
11ref|XM_595677.2| PREDICTED: Bos taurus similar to Protein C7orf2... 44 0.41
12ref|XM_883280.1| PREDICTED: Bos taurus hypothetical protein LOC6... 44 0.41
13emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 i... 42 1.6
14emb|CR387993.5| Zebrafish DNA sequence from clone CH211-170E6 in... 42 1.6
15gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, comp... 42 1.6
16emb|BX511237.5| Zebrafish DNA sequence from clone CH211-251M3 in... 42 1.6
17emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 ... 42 1.6
18gb|AC010646.5| Homo sapiens chromosome 19 clone LLNLR-277B12, co... 42 1.6
19dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
20emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in l... 42 1.6
21gb|BC086740.1| Danio rerio zgc:101800, mRNA (cDNA clone MGC:1018... 40 6.4
22gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 6.4
23gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, com... 40 6.4
24ref|XM_380213.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.4
25emb|Z81086.1|CEF53B6 Caenorhabditis elegans Cosmid F53B6, comple... 40 6.4
26gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 6.4
27gb|BC058940.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cD... 40 6.4
28gb|AC123686.11| Mus musculus chromosome 5, clone RP23-301L9, com... 40 6.4
29gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome... 40 6.4
30emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A1... 40 6.4
31gb|BC079853.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cD... 40 6.4
32emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in ... 40 6.4
33emb|BX548000.6| Zebrafish DNA sequence from clone CH211-199M8 in... 40 6.4
34ref|NM_172726.2| Mus musculus RIKEN cDNA E130309D02 gene (E13030... 40 6.4
35dbj|AK172614.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.4
36dbj|AK087531.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 6.4
37dbj|AK050733.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 6.4
38ref|NM_060009.1| Caenorhabditis elegans F53B6.6 (cuticulin) mRNA... 40 6.4
39gb|BC082321.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cD... 40 6.4
40dbj|AK054218.1| Mus musculus 2 days pregnant adult female oviduc... 40 6.4
41dbj|AK041667.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.4
42dbj|AK053801.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 6.4
43gb|AC158805.4| Mus musculus 10 BAC RP24-222M1 (Roswell Park Canc... 40 6.4
44emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 i... 40 6.4
45ref|NM_001008621.1| Danio rerio zgc:101800 (zgc:101800), mRNA 40 6.4
46gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 6.4
47dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, c... 40 6.4
48emb|BX005083.10| Zebrafish DNA sequence from clone CH211-220F13 ... 40 6.4
49gb|AC118226.7| Mus musculus chromosome 5, clone RP23-372N19, com... 40 6.4
50gb|U21603.1|JDVCG Jembrana disease virus Tabanan/87 strain, comp... 40 6.4 
>ref|NM_183696.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2832

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 175  tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
            ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 2832 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 2773

                                                                        
Query: 235  gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
             |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 2772 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 2713

                                                                        
Query: 295  cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
            ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 2712 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 2654

                                                                        
Query: 354  tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
            ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 2653 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 2594

                                                                   
Query: 414  gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
            |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 2593 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 2539
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                            
Query: 175      tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
                ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 11682493 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 11682434

                                                                            
Query: 235      gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
                 |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 11682433 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 11682374

                                                                            
Query: 295      cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
                ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 11682373 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 11682315

                                                                            
Query: 354      tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
                ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 11682314 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 11682255

                                                                       
Query: 414      gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
                |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 11682254 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 11682200



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                            
Query: 265      cttctggatctccatggtcatggcgctgtccacgctgccctgcgacagccgcctgtgcgc 324
                ||||||||||||||   |||||||| |||| ||||| |||  ||| | |  || ||||||
Sbjct: 13782086 cttctggatctccagactcatggcggtgtcgacgctccccgacgatatcttccggtgcgc 13782027

                                                                            
Query: 325      cttctgcaggtgaagcttcagcgagctggtgctcagccccacgttcttgccgcatatcgg 384
                |||||||||||| |||||||| |||||| |||| |||||  ||||||||||||| || ||
Sbjct: 13782026 cttctgcaggtggagcttcagtgagctgctgctgagcccagcgttcttgccgcagatggg 13781967

                            
Query: 385      gcacaccttcat 396
                ||||||||||||
Sbjct: 13781966 gcacaccttcat 13781955
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>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0551A11
          Length = 132384

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                          
Query: 175    tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
              ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 121617 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 121558

                                                                          
Query: 235    gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
               |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 121557 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 121498

                                                                          
Query: 295    cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
              ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 121497 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 121439

                                                                          
Query: 354    tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
              ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 121438 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 121379

                                                                     
Query: 414    gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
              |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 121378 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 121324
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>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1011A07
          Length = 150590

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                         
Query: 175   tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
             ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 21661 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 21602

                                                                         
Query: 235   gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
              |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 21601 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 21542

                                                                         
Query: 295   cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
             ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 21541 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 21483

                                                                         
Query: 354   tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
             ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 21482 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 21423

                                                                    
Query: 414   gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
             |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 21422 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 21368
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>dbj|AK103288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124N21, full
            insert sequence
          Length = 3346

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 175  tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
            ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 3122 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 3063

                                                                        
Query: 235  gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
             |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 3062 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 3003

                                                                        
Query: 295  cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
            ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 3002 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 2944

                                                                        
Query: 354  tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
            ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 2943 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 2884

                                                                   
Query: 414  gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
            |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 2883 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 2829
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>dbj|AK062171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C05, full
           insert sequence
          Length = 1194

 Score =  260 bits (131), Expect = 4e-66
 Identities = 256/295 (86%), Gaps = 2/295 (0%)
 Strand = Plus / Minus

                                                                       
Query: 175 tcagaagctgagctcgttggcgaacgccttggccagcttctgggaagggctgaggctccc 234
           ||||||||||||||| |  |||||||||||||  |||||||| |||||||| ||||||||
Sbjct: 976 tcagaagctgagctcatcagcgaacgccttggtaagcttctgagaagggctcaggctccc 917

                                                                       
Query: 235 gccgcggctgatccggagcgactcgatcgacttctggatctccatggtcatggcgctgtc 294
            |||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 916 accgcggctgatccggagcgactggatcgacttctgaatctccaaggtcatggcgctgtc 857

                                                                       
Query: 295 cacgctgccctgc-gacagccgcctgtgcgccttctgcaggtgaagcttcagcgagctgg 353
           ||| ||  ||||| || |||||| |||| ||||||||||| || || || || ||||| |
Sbjct: 856 cacact-acctgcagatagccgcttgtgagccttctgcagatgcagtttgagtgagctcg 798

                                                                       
Query: 354 tgctcagccccacgttcttgccgcatatcgggcacaccttcatctcaggccgcttctgct 413
           ||||||| || |||||||||| ||| || |||||||||||||||||||| ||||| ||||
Sbjct: 797 tgctcagtccgacgttcttgctgcagattgggcacaccttcatctcaggtcgcttgtgct 738

                                                                  
Query: 414 gccagtccatcgacgccttgccgtgcagcttcctgtctagagctagcagggcctt 468
           |||| ||||| ||| |||| || |||||||||||||| || |||||||| |||||
Sbjct: 737 gccaatccatagacacctttccatgcagcttcctgtcaagcgctagcagagcctt 683
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>ref|NM_183994.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2820

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                        
Query: 265  cttctggatctccatggtcatggcgctgtccacgctgccctgcgacagccgcctgtgcgc 324
            ||||||||||||||   |||||||| |||| ||||| |||  ||| | |  || ||||||
Sbjct: 2745 cttctggatctccagactcatggcggtgtcgacgctccccgacgatatcttccggtgcgc 2686

                                                                        
Query: 325  cttctgcaggtgaagcttcagcgagctggtgctcagccccacgttcttgccgcatatcgg 384
            |||||||||||| |||||||| |||||| |||| |||||  ||||||||||||| || ||
Sbjct: 2685 cttctgcaggtggagcttcagtgagctgctgctgagcccagcgttcttgccgcagatggg 2626

                        
Query: 385  gcacaccttcat 396
            ||||||||||||
Sbjct: 2625 gcacaccttcat 2614
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>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146B04
          Length = 145186

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                          
Query: 265    cttctggatctccatggtcatggcgctgtccacgctgccctgcgacagccgcctgtgcgc 324
              ||||||||||||||   |||||||| |||| ||||| |||  ||| | |  || ||||||
Sbjct: 120414 cttctggatctccagactcatggcggtgtcgacgctccccgacgatatcttccggtgcgc 120355

                                                                          
Query: 325    cttctgcaggtgaagcttcagcgagctggtgctcagccccacgttcttgccgcatatcgg 384
              |||||||||||| |||||||| |||||| |||| |||||  ||||||||||||| || ||
Sbjct: 120354 cttctgcaggtggagcttcagtgagctgctgctgagcccagcgttcttgccgcagatggg 120295

                          
Query: 385    gcacaccttcat 396
              ||||||||||||
Sbjct: 120294 gcacaccttcat 120283
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                         
Query: 265   cttctggatctccatggtcatggcgctgtccacgctgccctgcgacagccgcctgtgcgc 324
             ||||||||||||||   |||||||| |||| ||||| |||  ||| | |  || ||||||
Sbjct: 19489 cttctggatctccagactcatggcggtgtcgacgctccccgacgatatcttccggtgcgc 19430

                                                                         
Query: 325   cttctgcaggtgaagcttcagcgagctggtgctcagccccacgttcttgccgcatatcgg 384
             |||||||||||| |||||||| |||||| |||| |||||  ||||||||||||| || ||
Sbjct: 19429 cttctgcaggtggagcttcagtgagctgctgctgagcccagcgttcttgccgcagatggg 19370

                         
Query: 385   gcacaccttcat 396
             ||||||||||||
Sbjct: 19369 gcacaccttcat 19358
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>dbj|AK069585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022M24, full
            insert sequence
          Length = 3249

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/132 (84%)
 Strand = Plus / Minus

                                                                        
Query: 265  cttctggatctccatggtcatggcgctgtccacgctgccctgcgacagccgcctgtgcgc 324
            ||||||||||||||   |||||||| |||| ||||| |||  ||| | |  || ||||||
Sbjct: 2550 cttctggatctccagactcatggcggtgtcgacgctccccgacgatatcttccggtgcgc 2491

                                                                        
Query: 325  cttctgcaggtgaagcttcagcgagctggtgctcagccccacgttcttgccgcatatcgg 384
            |||||||||||| |||||||| |||||| |||| |||||  ||||||||||||| || ||
Sbjct: 2490 cttctgcaggtggagcttcagtgagctgctgctgagcccagcgttcttgccgcagatggg 2431

                        
Query: 385  gcacaccttcat 396
            ||||||||||||
Sbjct: 2430 gcacaccttcat 2419
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>ref|XM_595677.2| PREDICTED: Bos taurus similar to Protein C7orf26 homolog (LOC517505),
            mRNA
          Length = 2343

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 382  cgggcacaccttcatctcaggc 403
            ||||||||||||||||||||||
Sbjct: 1695 cgggcacaccttcatctcaggc 1716
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>ref|XM_883280.1| PREDICTED: Bos taurus hypothetical protein LOC618117 (LOC618117),
           mRNA
          Length = 990

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 221 gggctgaggctcccgccgcggc 242
           ||||||||||||||||||||||
Sbjct: 575 gggctgaggctcccgccgcggc 554
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>emb|CR392328.18| Zebrafish DNA sequence from clone DKEYP-108C1 in linkage group 5,
              complete sequence
          Length = 182066

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 178023 ctgagtctcaccctctgtgcc 178003



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 160066 ctgagtctcaccctctgtgcc 160046



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 143247 ctgagtctcaccctctgtgcc 143227
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>emb|CR387993.5| Zebrafish DNA sequence from clone CH211-170E6 in linkage group 5,
             complete sequence
          Length = 54332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    ctgagtctcaccctctgtgcc 104
             |||||||||||||||||||||
Sbjct: 40475 ctgagtctcaccctctgtgcc 40495
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>gb|AC104111.2| Homo sapiens chromosome 5 clone RP11-176O14, complete sequence
          Length = 171234

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    tatttgtacttgaaaacatga 58
             |||||||||||||||||||||
Sbjct: 68323 tatttgtacttgaaaacatga 68303
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>emb|BX511237.5| Zebrafish DNA sequence from clone CH211-251M3 in linkage group 5,
             complete sequence
          Length = 52527

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    ctgagtctcaccctctgtgcc 104
             |||||||||||||||||||||
Sbjct: 27217 ctgagtctcaccctctgtgcc 27237
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>emb|BX510649.12| Zebrafish DNA sequence from clone CH211-158M24 in linkage group 5,
              complete sequence
          Length = 189844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 169087 ctgagtctcaccctctgtgcc 169067



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 151167 ctgagtctcaccctctgtgcc 151147



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 134322 ctgagtctcaccctctgtgcc 134302
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>gb|AC010646.5| Homo sapiens chromosome 19 clone LLNLR-277B12, complete sequence
          Length = 41461

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   ggctgaggctcccgccgcggc 242
             |||||||||||||||||||||
Sbjct: 36571 ggctgaggctcccgccgcggc 36551
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>dbj|AK109969.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C04, full
            insert sequence
          Length = 3464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 187  ctcgttggcgaacgccttggccagc 211
            ||||||||||| |||||||||||||
Sbjct: 2497 ctcgttggcgatcgccttggccagc 2473
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>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete
              sequence
          Length = 243510

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     ctgagtctcaccctctgtgcc 104
              |||||||||||||||||||||
Sbjct: 235967 ctgagtctcaccctctgtgcc 235947
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>gb|BC086740.1| Danio rerio zgc:101800, mRNA (cDNA clone MGC:101800 IMAGE:7231302),
            complete cds
          Length = 2437

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  tctgcaggtgaagcttcagc 346
            ||||||||||||||||||||
Sbjct: 1163 tctgcaggtgaagcttcagc 1182
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 148     gtgtacatacaaggaaagaa 167
               ||||||||||||||||||||
Sbjct: 1551248 gtgtacatacaaggaaagaa 1551267
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>gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, complete sequence
          Length = 196758

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ttgaaaacatgagcatttct 66
             ||||||||||||||||||||
Sbjct: 95387 ttgaaaacatgagcatttct 95406
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>ref|XM_380213.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00037.1)
            partial mRNA
          Length = 7428

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  gcgaacgccttggccagctt 213
            ||||||||||||||||||||
Sbjct: 2865 gcgaacgccttggccagctt 2846
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>emb|Z81086.1|CEF53B6 Caenorhabditis elegans Cosmid F53B6, complete sequence
          Length = 32412

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tacttgaaaacatgagcatt 63
             ||||||||||||||||||||
Sbjct: 28915 tacttgaaaacatgagcatt 28934
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>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 83    cctgagtctcaccctctgtgccct 106
             |||||||||| |||||||||||||
Sbjct: 46189 cctgagtctctccctctgtgccct 46212
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>gb|BC058940.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cDNA clone
            IMAGE:5704921), partial cds
          Length = 4311

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 3642 gggcacaccttcatctcagg 3661
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>gb|AC123686.11| Mus musculus chromosome 5, clone RP23-301L9, complete sequence
          Length = 212246

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   gggcacaccttcatctcagg 402
             ||||||||||||||||||||
Sbjct: 35360 gggcacaccttcatctcagg 35379
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>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence
          Length = 196879

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   tctccatggtcatggcgctgtcca 296
             |||||||||||||| |||||||||
Sbjct: 97862 tctccatggtcatgtcgctgtcca 97885
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>emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A17 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 105104

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   gagctggtgctcagccccac 366
             ||||||||||||||||||||
Sbjct: 87876 gagctggtgctcagccccac 87895
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>gb|BC079853.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cDNA clone MGC:100272
            IMAGE:5716912), complete cds
          Length = 2159

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1497 gggcacaccttcatctcagg 1516
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>emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in linkage group 2, complete
              sequence
          Length = 191649

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     atttcttgtttgatatatta 80
              ||||||||||||||||||||
Sbjct: 155814 atttcttgtttgatatatta 155833
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>emb|BX548000.6| Zebrafish DNA sequence from clone CH211-199M8 in linkage group 11,
             complete sequence
          Length = 216767

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ttcactacagtacaagtgtg 140
             ||||||||||||||||||||
Sbjct: 86881 ttcactacagtacaagtgtg 86862
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>ref|NM_172726.2| Mus musculus RIKEN cDNA E130309D02 gene (E130309D02Rik), mRNA
          Length = 2210

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1564 gggcacaccttcatctcagg 1583
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>dbj|AK172614.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830219L24 product:Protein C7orf26
            homolog, full insert sequence
          Length = 2151

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1510 gggcacaccttcatctcagg 1529
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>dbj|AK087531.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130314L07 product:Protein C7orf26
            homolog, full insert sequence
          Length = 2210

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1564 gggcacaccttcatctcagg 1583
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>dbj|AK050733.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030012F13 product:hypothetical
            protein, full insert sequence
          Length = 2121

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1477 gggcacaccttcatctcagg 1496
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>ref|NM_060009.1| Caenorhabditis elegans F53B6.6 (cuticulin) mRNA, complete cds
          Length = 1833

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  tacttgaaaacatgagcatt 63
           ||||||||||||||||||||
Sbjct: 890 tacttgaaaacatgagcatt 871
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>gb|BC082321.1| Mus musculus RIKEN cDNA E130309D02 gene, mRNA (cDNA clone MGC:90548
            IMAGE:6411746), complete cds
          Length = 1967

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1307 gggcacaccttcatctcagg 1326
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>dbj|AK054218.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
            full-length enriched library, clone:E230031P04
            product:CDNA FLJ31587 FIS, CLONE NT2RI2002243 homolog
            [Homo sapiens], full insert sequence
          Length = 1906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1264 gggcacaccttcatctcagg 1283
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>dbj|AK041667.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630028N22 product:hypothetical protein,
            full insert sequence
          Length = 2147

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1509 gggcacaccttcatctcagg 1528
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>dbj|AK053801.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130309D02 product:hypothetical protein,
            full insert sequence
          Length = 2208

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 383  gggcacaccttcatctcagg 402
            ||||||||||||||||||||
Sbjct: 1564 gggcacaccttcatctcagg 1583
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>gb|AC158805.4| Mus musculus 10 BAC RP24-222M1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 131325

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   cagcttctgggaagggctga 227
             ||||||||||||||||||||
Sbjct: 16349 cagcttctgggaagggctga 16368
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>emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 in linkage group 3,
              complete sequence
          Length = 218404

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gttgtattcactacagtaca 134
              ||||||||||||||||||||
Sbjct: 123242 gttgtattcactacagtaca 123223
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>ref|NM_001008621.1| Danio rerio zgc:101800 (zgc:101800), mRNA
          Length = 2437

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  tctgcaggtgaagcttcagc 346
            ||||||||||||||||||||
Sbjct: 1163 tctgcaggtgaagcttcagc 1182
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     cctgagtctcaccctctgtgccct 106
              |||||||||| |||||||||||||
Sbjct: 134423 cctgagtctctccctctgtgccct 134446
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>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence
          Length = 184026

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    tgaggctcccgccgcggctg 244
              ||||||||||||||||||||
Sbjct: 158712 tgaggctcccgccgcggctg 158693
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>emb|BX005083.10| Zebrafish DNA sequence from clone CH211-220F13 in linkage group 2,
              complete sequence
          Length = 212081

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     atttcttgtttgatatatta 80
              ||||||||||||||||||||
Sbjct: 189851 atttcttgtttgatatatta 189832
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>gb|AC118226.7| Mus musculus chromosome 5, clone RP23-372N19, complete sequence
          Length = 173599

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    gggcacaccttcatctcagg 402
              ||||||||||||||||||||
Sbjct: 108976 gggcacaccttcatctcagg 108995
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>gb|U21603.1|JDVCG Jembrana disease virus Tabanan/87 strain, complete genome
          Length = 7732

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  cttctgggaagggctgaggc 230
            ||||||||||||||||||||
Sbjct: 3540 cttctgggaagggctgaggc 3559


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,879,323
Number of Sequences: 3902068
Number of extensions: 3879323
Number of successful extensions: 77146
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77022
Number of HSP's gapped (non-prelim): 113
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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