ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl32b01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 142 bits (357), Expect = 6e-34 Identities = 69/82 (84%), Positives = 73/82 (89%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRDTPEWTSDAKAL+AFKRFGSRLV+IE RI DMN + ALKNRNGPVKMPYMLLYPNT Sbjct: 796 LGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNT 855 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SD EK GLTAMGIPNS+SI Sbjct: 856 SDVTKEKGQGLTAMGIPNSISI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 127 bits (318), Expect = 2e-29 Identities = 62/82 (75%), Positives = 66/82 (80%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRDTPEWTSD KALE FKRF RLVEIE +++ MN DP LKNRNGP K PYMLLYPNT Sbjct: 782 LGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNT 841 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SD G A GLTA GIPNS+SI Sbjct: 842 SDHKG-AAAGLTAKGIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 124 bits (311), Expect = 1e-28 Identities = 61/82 (74%), Positives = 67/82 (81%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRDTPEWTSDAKALEAFKRFG+RL EIE R++ MNKDP KNR GP PY LLYPNT Sbjct: 790 LGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNT 849 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SD G+ A GL+A GIPNS+SI Sbjct: 850 SDLKGD-AAGLSARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 120 bits (301), Expect = 2e-27 Identities = 58/82 (70%), Positives = 66/82 (80%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRDTP WTSDA+ALEAF+RF RLVEIE +++ MN D LKNRNGP + PYMLLYPNT Sbjct: 786 LGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNT 845 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SD G A G+TA GIPNS+SI Sbjct: 846 SDVTG-AAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 119 bits (298), Expect = 4e-27 Identities = 58/82 (70%), Positives = 66/82 (80%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRDTPEWTSD KALEAFKRF +LVEIE ++L+MNKDP LKNR GP PY L++PNT Sbjct: 783 LGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNT 842 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SD G A G+TA GIPNS+SI Sbjct: 843 SDNKG-AAEGITARGIPNSISI 863
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 100 bits (250), Expect = 2e-21 Identities = 49/82 (59%), Positives = 60/82 (73%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRD P WT++ KAL+AFKRFG +L EIE++I+ NKD +L+NRNGPVKMPY +L P Sbjct: 787 LGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTC 846 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 D GLT GIPNS+SI Sbjct: 847 EDE------GLTFRGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 100 bits (249), Expect = 2e-21 Identities = 47/82 (57%), Positives = 61/82 (74%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG+RD P WTSD +ALEAFK+FG++L EIEK++ N D L+NR+GPV+MPY LLYP++ Sbjct: 787 LGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSS 846 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + GLT GIPNS+SI Sbjct: 847 KE-------GLTFRGIPNSISI 861
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 95.1 bits (235), Expect = 9e-20 Identities = 49/83 (59%), Positives = 60/83 (72%), Gaps = 1/83 (1%) Frame = -2 Query: 484 LGQRDTPE-WTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPN 308 LGQRD + WTSDA LEAFKRFG +L EIEK++++ NKD L+NR GP KMPY LLYP+ Sbjct: 778 LGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS 837 Query: 307 TSDANGEKALGLTAMGIPNSVSI 239 + + GLT GIPNS+SI Sbjct: 838 SEE-------GLTFRGIPNSISI 853
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 94.7 bits (234), Expect = 1e-19 Identities = 45/82 (54%), Positives = 59/82 (71%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG+RD P WTSD +ALEAFKRFG++L +IE ++ + N D L+NR GPV+MPY LL P++ Sbjct: 783 LGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSS 842 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + GLT GIPNS+SI Sbjct: 843 KE-------GLTFRGIPNSISI 857
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 94.7 bits (234), Expect = 1e-19 Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 1/83 (1%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALK-NRNGPVKMPYMLLYPN 308 LGQRD P WTSD+KAL+AF++FG++L EIE++++ N DP+L+ NR GPV++PY LLYP+ Sbjct: 764 LGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS 823 Query: 307 TSDANGEKALGLTAMGIPNSVSI 239 + + GLT GIPNS+SI Sbjct: 824 SEE-------GLTFRGIPNSISI 839
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 94.7 bits (234), Expect = 1e-19 Identities = 45/82 (54%), Positives = 60/82 (73%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRD P WTSD+KAL+AF++FG++L EIE+++ N D +L NR GPV++PY LL+PN+ Sbjct: 792 LGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNS 851 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 GLT GIPNS+SI Sbjct: 852 E--------GLTCRGIPNSISI 865
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 94.0 bits (232), Expect = 2e-19 Identities = 46/82 (56%), Positives = 60/82 (73%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG+R+TP WT+D KALEAFKRFGS+L IE +I N DP+L+NR GPV++PY LL+ ++ Sbjct: 790 LGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSS 849 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + GLT GIPNS+SI Sbjct: 850 EE-------GLTFKGIPNSISI 864
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 93.2 bits (230), Expect = 3e-19 Identities = 43/82 (52%), Positives = 62/82 (75%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQR+ P WTSD+KAL+AF++FG++L EIE ++ + N DP+L +R GPV++PY LL+P++ Sbjct: 790 LGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSS 849 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + GLT GIPNS+SI Sbjct: 850 KE-------GLTFRGIPNSISI 864
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 88.2 bits (217), Expect = 1e-17 Identities = 44/82 (53%), Positives = 54/82 (65%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQR++PEWT D + L AF RFG +L +IEK+I+ N D L NR+GPV PY LL+P + Sbjct: 787 LGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTS 846 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 GLT GIPNSVSI Sbjct: 847 EG-------GLTGKGIPNSVSI 861
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 87.4 bits (215), Expect = 2e-17 Identities = 44/82 (53%), Positives = 57/82 (69%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRD+ EW ++ +ALEAF++FG ++ EIEK I + N D LKNR G VKMPY LL+P++ Sbjct: 785 LGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSS 844 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 G+T GIPNSVSI Sbjct: 845 EG-------GVTGRGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 87.0 bits (214), Expect = 2e-17 Identities = 43/82 (52%), Positives = 55/82 (67%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQR++PEWT D + L AF+RFG++L +IEK+I+ N + L NR GPV PY LL+P + Sbjct: 786 LGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTS 845 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 GLT GIPNSVSI Sbjct: 846 EG-------GLTGKGIPNSVSI 860
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 86.3 bits (212), Expect = 4e-17 Identities = 44/82 (53%), Positives = 55/82 (67%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LGQRD+ EWT D + L AF+RFG L +IE RI+ MN + KNR+GPV +PY LL+P + Sbjct: 785 LGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTS 844 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + GLT GIPNSVSI Sbjct: 845 EE-------GLTGKGIPNSVSI 859
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 86.3 bits (212), Expect = 4e-17 Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%) Frame = -2 Query: 484 LGQR-DTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPN 308 LG+R + +WT+D+ EAFKRFG +L EIE+++ N D +L+NR GPVKMPY LLYP+ Sbjct: 791 LGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS 850 Query: 307 TSDANGEKALGLTAMGIPNSVSI 239 + + GLT GIPNS+SI Sbjct: 851 SEE-------GLTCRGIPNSISI 866
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 81.6 bits (200), Expect = 1e-15 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = -2 Query: 484 LGQRDTPE-WTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPN 308 LG+RD + WTSDA LEAFKRFG +L EIEK+++ N D L+NR GP KMPY LLYP+ Sbjct: 672 LGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731 Query: 307 TSDANGEKALGLTAMGI 257 + + GLT GI Sbjct: 732 SEE-------GLTFRGI 741
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 60.8 bits (146), Expect = 2e-09 Identities = 40/82 (48%), Positives = 45/82 (54%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG T W SDA A+ F +RL EIE I NKD LKNR G +PY L+ P Sbjct: 867 LGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-F 925 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 SDA G+T MGIPNS SI Sbjct: 926 SDA------GVTGMGIPNSTSI 941
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 60.5 bits (145), Expect = 2e-09 Identities = 37/82 (45%), Positives = 43/82 (52%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG T W SDA A+ F +RL EIE I NKD LKNR G +PY L+ P + Sbjct: 850 LGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFS 909 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 G+T MGIPNS SI Sbjct: 910 DS-------GVTGMGIPNSTSI 924
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 56.6 bits (135), Expect = 3e-08 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYP-- 311 +G + P WT D +AF+ F +I +++ + N DP KNR+G +PY+LL P Sbjct: 852 MGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSD 911 Query: 310 -NTSDANGEKALGLTAMGIPNSVSI 239 + +D + + MGIPNS+SI Sbjct: 912 GDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 55.8 bits (133), Expect = 6e-08 Identities = 29/82 (35%), Positives = 48/82 (58%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 +G P W D + +AF+ F ++ +I +++ + NKD + +NR+G +PY+LL P Sbjct: 853 MGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-- 910 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 + N A + MGIPNS+SI Sbjct: 911 LNGNPMDAKTVMEMGIPNSISI 932
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 55.8 bits (133), Expect = 6e-08 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 LG+R WT+D AL A + F + + E+ I N DP+ +NR G +PY L+ P++ Sbjct: 825 LGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS 884 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 G+T G+PNSV+I Sbjct: 885 GP-------GITCRGVPNSVTI 899
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 52.0 bits (123), Expect = 8e-07 Identities = 31/82 (37%), Positives = 42/82 (51%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 +G+ P W ++ AF++F RL E E I N +P KNR G +PY LL P + Sbjct: 822 MGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFS 881 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 G+T GIPNS+SI Sbjct: 882 EP-------GVTGRGIPNSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 45.8 bits (107), Expect = 6e-05 Identities = 27/74 (36%), Positives = 38/74 (51%) Frame = -2 Query: 460 WTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNTSDANGEKA 281 WT+D A+ A F + + E+ I N D KNR G +PY LL P++ Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPP------ 905 Query: 280 LGLTAMGIPNSVSI 239 G+T G+PNS+SI Sbjct: 906 -GVTCRGVPNSISI 918
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 45.4 bits (106), Expect = 8e-05 Identities = 27/82 (32%), Positives = 42/82 (51%) Frame = -2 Query: 484 LGQRDTPEWTSDAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVKMPYMLLYPNT 305 +G++ W ++ AF+RF +L +E I + N + LKNR G + Y LL P + Sbjct: 822 IGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTS 881 Query: 304 SDANGEKALGLTAMGIPNSVSI 239 G+T MG+P S+SI Sbjct: 882 EH-------GVTGMGVPYSISI 896
>CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Pancreastatin;| Parastatin; WE-14] (Fragment) Length = 446 Score = 33.9 bits (76), Expect = 0.24 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -1 Query: 449 RQGARGVQEVRQPAGG--DREADPRHEQGPGAQEPERAREDALHAAVPQ 309 R GA+ ++ P+ G DRE P EQGP A+ E +A AVP+ Sbjct: 185 RPGAQAEEDHEGPSQGPVDREKGPSAEQGPQAEREEEEEAEAGEKAVPE 233
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 31.6 bits (70), Expect = 1.2 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314 G T+ + RP S Q SP+ +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 31.2 bits (69), Expect = 1.5 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314 G T+ + RP S Q SP+ +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 31.2 bits (69), Expect = 1.5 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 281 G T+ + RP S Q SP+ Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312
>SPI1_SOLTU (P58514) Serine protease inhibitor 1 precursor (PSPI-21)| (PSPI-21-6.3) [Contains: Serine protease inhibitor 1 chain A; Serine protease inhibitor 1 chain B] Length = 221 Score = 30.8 bits (68), Expect = 2.0 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP++ +P A+ V Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 44 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 160 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>SPI2_SOLTU (P58515) Serine protease inhibitor 2 (PSPI-21) (PSPI-21-5.2)| [Contains: Serine protease inhibitor 2 chain A; Serine protease inhibitor 2 chain B] Length = 186 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 41 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 96
>ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog| Length = 343 Score = 30.4 bits (67), Expect = 2.6 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -1 Query: 437 RGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDALHAAVPQH 306 R V+E+ + A +RE RH+Q QE ++ E H+++ QH Sbjct: 276 RAVKEINEQARREREEQERHKQ--QQQEKQQKIEQQTHSSIHQH 317
>SPI7_SOLTU (P30941) Serine protease inhibitor 7 precursor (PIG) (PIGEN1)| (Allergen Sola t 4) (STPIB) (STPIA) (pKEN14-28) (pF4) Length = 221 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>SPI6_SOLTU (Q41433) Probable serine protease inhibitor 6 precursor (AM66)| Length = 221 Score = 30.4 bits (67), Expect = 2.6 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%) Frame = +3 Query: 273 SPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLF--------MSRIRFSISTSRL 416 SP++ +P A+ + Y+S G P RF+ + S F + I+F+ISTS+L Sbjct: 69 SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124
>ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 418 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +1 Query: 373 CSCRGSASRSPPAGCRTS*TPRAPWRPTSTP 465 C C G R P A R + +PRAP RP P Sbjct: 361 CHCGGRLPREPCAADRPASSPRAPLRPGPAP 391
>DPOL_HHV1K (P04292) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 30.0 bits (66), Expect = 3.4 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -1 Query: 482 GAARHAGVDVGRQGARGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDA 330 G R AG + ++ A ++ +P + D R E+G G +EPE ARE A Sbjct: 641 GRFRGAGGEAPKRPAAAREDEERPEEEGEDEDER-EEGGGEREPEGARETA 690
>DPOL_HHV1A (P07917) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 30.0 bits (66), Expect = 3.4 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -1 Query: 482 GAARHAGVDVGRQGARGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDA 330 G R AG + ++ A ++ +P + D R E+G G +EPE ARE A Sbjct: 641 GRFRGAGGEAPKRPAAAREDEERPEEEGEDEDER-EEGGGEREPEGARETA 690
>DPOL_HHV11 (P04293) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 30.0 bits (66), Expect = 3.4 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -1 Query: 482 GAARHAGVDVGRQGARGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDA 330 G R AG + ++ A ++ +P + D R E+G G +EPE ARE A Sbjct: 641 GRFRGAGGEAPKRPAAAREDEERPEEEGEDEDER-EEGGGEREPEGARETA 690
>TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 292 Score = 30.0 bits (66), Expect = 3.4 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = +3 Query: 228 CSAQMETLLGMPMAVSPSAFSPLASDVLGYSSM*GIFTGPFRFLSAGSLFMSRIRFSIST 407 C A++ +LG P A+ VL + G T RFLS G ++ + +RF +ST Sbjct: 18 CIARLRRVLGERRIGHGGTLDPAATGVLPVAV--GRATRLLRFLSEGKVYRATVRFGLST 75
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 29.6 bits (65), Expect = 4.4 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 42 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 191 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 192 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 314 G + + RP S Q SP+ +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 5.8 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 44 LSSPYQHHLRHNHHFPSS 97 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid| kinase 1) (hPanK1) (hPanK) Length = 598 Score = 29.3 bits (64), Expect = 5.8 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -1 Query: 467 AGVDVGRQGARGVQEVRQPAGGDREADPRHEQGP 366 AG +G +G +EV + AGG E RH Q P Sbjct: 64 AGAVGPARGGQGAEEVGESAGGGEERRVRHPQAP 97
>DPOL_HHV1S (P09854) DNA polymerase (EC 2.7.7.7)| Length = 1235 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -1 Query: 482 GAARHAGVDVGRQGARGVQEVRQPAGGDREADPRHEQGPGAQEPERAREDA 330 G R AG + ++ A ++ +P + D R E+G G +EP+ ARE A Sbjct: 641 GRFRGAGGEAPKRPAAAREDEERPEEEGEDEDER-EEGGGEREPDGARETA 690
>HAIR_HUMAN (O43593) Protein hairless| Length = 1189 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = -1 Query: 446 QGARGVQEVRQPAGGDREADP-RHEQGPGAQEPERARED 333 QGA G QEVR + G+++ D +H++ G Q+ + + +D Sbjct: 441 QGAGGWQEVRDTSIGNKDVDSGQHDEQKGPQDGQASLQD 479
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 137 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 229 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 261 PMAVSPSAFSPLASDVLGYSSM*GIFT 341 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>HAIR_RAT (P97609) Protein hairless| Length = 1181 Score = 28.5 bits (62), Expect = 9.9 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Frame = -1 Query: 470 HAGVDVGRQGARGVQEVRQPAGGDR-EADPRHEQGPGAQEPERAREDALHAAVPQH 306 H GRQGAR QE + + G + EA + EQ R RE L QH Sbjct: 431 HTFPGTGRQGARAWQETPETSTGSKAEAQQQEEQRGPRDGRIRLRESRLEDTSCQH 486
>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor| Length = 1025 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -1 Query: 452 GRQGARGVQEVRQPAGGDREADPRHEQG 369 G +G RG VR P G EA P+ +QG Sbjct: 427 GERGPRGTPGVRGPRGDPGEAGPQGDQG 454 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,309,033 Number of Sequences: 219361 Number of extensions: 1261376 Number of successful extensions: 4987 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4379 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4908 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
