ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 274 1e-70
2gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 244 1e-61
3gb|AY104965.1| Zea mays PCO078085 mRNA sequence 234 1e-58
4gb|BT017406.1| Zea mays clone EL01N0330B04.c mRNA sequence 151 1e-33
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 135 8e-29
6dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic D... 135 8e-29
7dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic D... 135 8e-29
8dbj|AK121282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 8e-29
9dbj|AK099498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 8e-29
10emb|BX890577.6| Zebrafish DNA sequence from clone CH211-95G8, co... 42 0.91
11gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, co... 40 3.6
12ref|XM_846152.1| PREDICTED: Canis familiaris similar to Integrin... 40 3.6
13emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, compl... 40 3.6
14gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence 40 3.6
15emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145... 40 3.6
16gb|AC093020.6| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Cl... 40 3.6
17emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in ... 40 3.6
18emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in l... 40 3.6
19emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 40 3.6
20emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chrom... 40 3.6
21gb|AF047671.1|AF047671 Homo sapiens dystrophin (DMD) gene, dupli... 40 3.6
22gb|U60822.1|HSU60822 Human dystrophin (DMD) gene, exons 7, 8 and... 40 3.6
23emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, co... 40 3.6 
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
              aminoalcoholphosphotransferase, putative growth-regulating
              factor 1, putative GAG-POL precursor, putative GAG-POL
              precursor, putative RIRE2 orf3, putative anthocyanin
              regulatory C1, putative protein T30F21.6, putative copia
              polyprotein, putative copia polyprotein, putative protein
              NP_196765.1, and gb protein genes, complete cds; and
              putative zinc finger protein gene, partial cds
          Length = 144159

 Score =  274 bits (138), Expect = 1e-70
 Identities = 244/276 (88%), Gaps = 5/276 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      gaaaagctaacaaaaac-ttgttaaaccttaaatagatcagacagagctgcactaaaaag 59
              ||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||| 
Sbjct: 125019 gaaaagctaacaaaaaccttgttatagcttaaatagatcagaaagagctgcactaaaaac 124960

                                                                          
Query: 60     agaggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccc 119
              | ||||| |||||||||||||||||| | ||||||||||| ||||||||||||| |||||
Sbjct: 124959 aaaggtgcttcctgttaaaaggagcctactgttgttacat-aaaggctcttgtggccccc 124901

                                                                          
Query: 120    ctaattacagataattaagaaacattgtttagaagttgggctgtctccaattcatatgac 179
              ||||||||||||||||||||||| || || | ||| ||||   |||||||||||||||||
Sbjct: 124900 ctaattacagataattaagaaaccttcttcaaaagctggg---tctccaattcatatgac 124844

                                                                          
Query: 180    caagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaactccaa 239
              |||||||  | || ||||||||||| ||||| |||||||| || ||||| || || ||||
Sbjct: 124843 caagctgtggttgctgataagccccaacttgcgggcctggagctgccaccccgaccccaa 124784

                                                  
Query: 240    cattgggaccaatggcagatgggacctgttgatgca 275
              |||||||||||||||| ||||| |||||||||||||
Sbjct: 124783 cattgggaccaatggccgatggcacctgttgatgca 124748
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score =  244 bits (123), Expect = 1e-61
 Identities = 242/277 (87%), Gaps = 6/277 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1     gaaaagctaacaaaaactt-gttaaaccttaaatagatcagacagagctgcactaaaaag 59
             |||| |||||||||||| | |||| | ||||||||||||||| |||||||||||||||| 
Sbjct: 27011 gaaaggctaacaaaaacctcgttatagcttaaatagatcagaaagagctgcactaaaaac 27070

                                                                         
Query: 60    agaggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccc 119
             | ||||| |||||||||||||||||| | ||||||||||| |||||||||||||||||||
Sbjct: 27071 aaaggtgcttcctgttaaaaggagcctactgttgttacat-aaaggctcttgtgaccccc 27129

                                                                         
Query: 120   c-taattacagataattaagaaacattgtttagaagttgggctgtctccaattcatatga 178
             | |||||||||||||||||||||| || || | ||| ||||   ||||||||||||||| 
Sbjct: 27130 cctaattacagataattaagaaaccttcttcaaaagctggg---tctccaattcatatgg 27186

                                                                         
Query: 179   ccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaactcca 238
             ||||||||  | || |||||||| || ||||| |||||||| || ||||| ||||| |||
Sbjct: 27187 ccaagctgtggttgctgataagctccaacttgcgggcctggagctgccaccccaacccca 27246

                                                  
Query: 239   acattgggaccaatggcagatgggacctgttgatgca 275
             ||||||||||||||||| ||||| |||||||||||||
Sbjct: 27247 acattgggaccaatggccgatggcacctgttgatgca 27283
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>gb|AY104965.1| Zea mays PCO078085 mRNA sequence
          Length = 1376

 Score =  234 bits (118), Expect = 1e-58
 Identities = 239/276 (86%), Gaps = 5/276 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaaaagctaacaaaaac-ttgttaaaccttaaatagatcagacagagctgcactaaaaag 59
            ||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||| 
Sbjct: 1276 gaaaagctaacaaaaaccttgttatagcttaaatagatcagaaagagctgcactaaaaac 1217

                                                                        
Query: 60   agaggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccc 119
            | ||||| |||| || |||||||||| | || |||||||| |||||||||||||||||||
Sbjct: 1216 aaaggtgcttcccgtcaaaaggagcctactgatgttacat-aaaggctcttgtgaccccc 1158

                                                                        
Query: 120  ctaattacagataattaagaaacattgtttagaagttgggctgtctccaattcatatgac 179
            ||||||||||||||||||||||| || || | ||| |||   ||||||||||||||||||
Sbjct: 1157 ctaattacagataattaagaaaccttcttcaaaagctgg---gtctccaattcatatgac 1101

                                                                        
Query: 180  caagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaactccaa 239
            |||  ||  | || ||||| ||||| ||||| |||||||| || ||||| || || ||||
Sbjct: 1100 caatttgtcgttgctgatatgccccaacttgtgggcctggagctgccaccccgaccccaa 1041

                                                
Query: 240  cattgggaccaatggcagatgggacctgttgatgca 275
            |||||||||||||||| ||||| |||||||||||||
Sbjct: 1040 cattgggaccaatggccgatggcacctgttgatgca 1005
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>gb|BT017406.1| Zea mays clone EL01N0330B04.c mRNA sequence
          Length = 778

 Score =  151 bits (76), Expect = 1e-33
 Identities = 130/144 (90%), Gaps = 3/144 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaaagctaacaaaaac-ttgttaaaccttaaatagatcagacagagctgcactaaaaag 59
           ||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||| 
Sbjct: 668 gaaaagctaacaaaaaccttgttatagcttaaatagatcagaaagagctgcactaaaaac 609

                                                                       
Query: 60  agaggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtga-cccc 118
           | ||||| |||| || |||||||||| | || ||||||| ||||||||||||||| ||||
Sbjct: 608 aaaggtgcttcccgtcaaaaggagcctactgatgttaca-taaaggctcttgtgaccccc 550

                                   
Query: 119 cctaattacagataattaagaaac 142
           ||||||||||||||||||||||||
Sbjct: 549 cctaattacagataattaagaaac 526



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 239 acattgggaccaatggcagatgggacctgttgatgca 275
           ||||||||||||||||| ||||| |||||||||||||
Sbjct: 431 acattgggaccaatggccgatggcacctgttgatgca 395
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  135 bits (68), Expect = 8e-29
 Identities = 125/140 (89%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                           
Query: 3       aaagctaacaaaaacttgttaaaccttaaatagatcagacagagctgcactaaaaagaga 62
               ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 5377741 aaagctaacaaaaccctgttataccttaaatagatcagaaagagctgcactaaaaacaaa 5377682

                                                                           
Query: 63      ggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccccta 122
                ||| ||||||||||||| ||||  || |||||||| ||||||||||||||| |||||||
Sbjct: 5377681 tgtgcttcctgttaaaagtagcctctt-ttgttaca-taaaggctcttgtga-cccccta 5377625

                                   
Query: 123     attacagataattaagaaac 142
               ||||||||||||||| ||||
Sbjct: 5377624 attacagataattaataaac 5377605



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                           
Query: 175     atgaccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaac 234
               ||||||||||||  | || ||||||||||| || || ||| |||||| ||||||||||||
Sbjct: 5377584 atgaccaagctggggttgctgataagcccctacctgaggggctggtgtagccacaccaac 5377525

                                                        
Query: 235     tccaacattgggaccaatggcagatgggacctgttgatgca 275
               |||| | ||||||||||| || ||| |||| ||||||||||
Sbjct: 5377524 tccaccgttgggaccaattgccgattggacttgttgatgca 5377484
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>dbj|AP005652.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0015B15
          Length = 123083

 Score =  135 bits (68), Expect = 8e-29
 Identities = 125/140 (89%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                          
Query: 3      aaagctaacaaaaacttgttaaaccttaaatagatcagacagagctgcactaaaaagaga 62
              ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 119253 aaagctaacaaaaccctgttataccttaaatagatcagaaagagctgcactaaaaacaaa 119194

                                                                          
Query: 63     ggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccccta 122
               ||| ||||||||||||| ||||  || |||||||| ||||||||||||||| |||||||
Sbjct: 119193 tgtgcttcctgttaaaagtagcctctt-ttgttaca-taaaggctcttgtga-cccccta 119137

                                  
Query: 123    attacagataattaagaaac 142
              ||||||||||||||| ||||
Sbjct: 119136 attacagataattaataaac 119117



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                          
Query: 175    atgaccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaac 234
              ||||||||||||  | || ||||||||||| || || ||| |||||| ||||||||||||
Sbjct: 119096 atgaccaagctggggttgctgataagcccctacctgaggggctggtgtagccacaccaac 119037

                                                       
Query: 235    tccaacattgggaccaatggcagatgggacctgttgatgca 275
              |||| | ||||||||||| || ||| |||| ||||||||||
Sbjct: 119036 tccaccgttgggaccaattgccgattggacttgttgatgca 118996
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>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0529B09
          Length = 138188

 Score =  135 bits (68), Expect = 8e-29
 Identities = 125/140 (89%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaagctaacaaaaacttgttaaaccttaaatagatcagacagagctgcactaaaaagaga 62
            ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 8675 aaagctaacaaaaccctgttataccttaaatagatcagaaagagctgcactaaaaacaaa 8616

                                                                        
Query: 63   ggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccccta 122
             ||| ||||||||||||| ||||  || |||||||| ||||||||||||||| |||||||
Sbjct: 8615 tgtgcttcctgttaaaagtagcctctt-ttgttaca-taaaggctcttgtga-cccccta 8559

                                
Query: 123  attacagataattaagaaac 142
            ||||||||||||||| ||||
Sbjct: 8558 attacagataattaataaac 8539



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  atgaccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaac 234
            ||||||||||||  | || ||||||||||| || || ||| |||||| ||||||||||||
Sbjct: 8518 atgaccaagctggggttgctgataagcccctacctgaggggctggtgtagccacaccaac 8459

                                                     
Query: 235  tccaacattgggaccaatggcagatgggacctgttgatgca 275
            |||| | ||||||||||| || ||| |||| ||||||||||
Sbjct: 8458 tccaccgttgggaccaattgccgattggacttgttgatgca 8418
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>dbj|AK121282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108L12, full
            insert sequence
          Length = 2972

 Score =  135 bits (68), Expect = 8e-29
 Identities = 125/140 (89%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaagctaacaaaaacttgttaaaccttaaatagatcagacagagctgcactaaaaagaga 62
            ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 2869 aaagctaacaaaaccctgttataccttaaatagatcagaaagagctgcactaaaaacaaa 2810

                                                                        
Query: 63   ggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccccta 122
             ||| ||||||||||||| ||||  || |||||||| ||||||||||||||| |||||||
Sbjct: 2809 tgtgcttcctgttaaaagtagcctctt-ttgttaca-taaaggctcttgtga-cccccta 2753

                                
Query: 123  attacagataattaagaaac 142
            ||||||||||||||| ||||
Sbjct: 2752 attacagataattaataaac 2733



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  atgaccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaac 234
            ||||||||||||  | || ||||||||||| || || ||| |||||| ||||||||||||
Sbjct: 2712 atgaccaagctggggttgctgataagcccctacctgaggggctggtgtagccacaccaac 2653

                                                     
Query: 235  tccaacattgggaccaatggcagatgggacctgttgatgca 275
            |||| | ||||||||||| || ||| |||| ||||||||||
Sbjct: 2652 tccaccgttgggaccaattgccgattggacttgttgatgca 2612
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>dbj|AK099498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028A11, full
            insert sequence
          Length = 2906

 Score =  135 bits (68), Expect = 8e-29
 Identities = 125/140 (89%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaagctaacaaaaacttgttaaaccttaaatagatcagacagagctgcactaaaaagaga 62
            ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||| | |
Sbjct: 2803 aaagctaacaaaaccctgttataccttaaatagatcagaaagagctgcactaaaaacaaa 2744

                                                                        
Query: 63   ggtggttcctgttaaaaggagccaattgttgttacattaaaggctcttgtgaccccccta 122
             ||| ||||||||||||| ||||  || |||||||| ||||||||||||||| |||||||
Sbjct: 2743 tgtgcttcctgttaaaagtagcctctt-ttgttaca-taaaggctcttgtga-cccccta 2687

                                
Query: 123  attacagataattaagaaac 142
            ||||||||||||||| ||||
Sbjct: 2686 attacagataattaataaac 2667



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  atgaccaagctgctgctgttgataagcccccacttgggggcctggtgcagccacaccaac 234
            ||||||||||||  | || ||||||||||| || || ||| |||||| ||||||||||||
Sbjct: 2646 atgaccaagctggggttgctgataagcccctacctgaggggctggtgtagccacaccaac 2587

                                                     
Query: 235  tccaacattgggaccaatggcagatgggacctgttgatgca 275
            |||| | ||||||||||| || ||| |||| ||||||||||
Sbjct: 2586 tccaccgttgggaccaattgccgattggacttgttgatgca 2546
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>emb|BX890577.6| Zebrafish DNA sequence from clone CH211-95G8, complete sequence
          Length = 114934

 Score = 42.1 bits (21), Expect = 0.91
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   ttacagataattaagaaacat 144
             |||||||||||||||||||||
Sbjct: 51780 ttacagataattaagaaacat 51800
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>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence
          Length = 170117

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    gggggcctggtgcagccaca 229
              ||||||||||||||||||||
Sbjct: 132576 gggggcctggtgcagccaca 132557
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>ref|XM_846152.1| PREDICTED: Canis familiaris similar to Integrin beta-5 precursor
           (LOC608977), mRNA
          Length = 3076

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 gggggcctggtgcagccaca 229
           ||||||||||||||||||||
Sbjct: 925 gggggcctggtgcagccaca 944
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>emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, complete sequence
          Length = 165027

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     agctaacaaaaacttgttaa 24
             ||||||||||||||||||||
Sbjct: 32552 agctaacaaaaacttgttaa 32533
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>gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence
          Length = 162045

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   gggggcctggtgcagccaca 229
             ||||||||||||||||||||
Sbjct: 17412 gggggcctggtgcagccaca 17393
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>emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145L23 on chromosome Xp21.1-21.3
             Contains part of the DMD gene for dystrophin (muscular
             dystrophy, Duchenne and Becker types) and a novel gene,
             complete sequence
          Length = 203006

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   acaccaactccaacattggg 246
             ||||||||||||||||||||
Sbjct: 99312 acaccaactccaacattggg 99293
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>gb|AC093020.6| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Clone RP23-358B23,
             complete sequence
          Length = 206396

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   ccaagctgctgctgttgataagcc 202
             |||||||||||||||||| |||||
Sbjct: 11129 ccaagctgctgctgttgagaagcc 11106
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>emb|BX927397.10| Zebrafish DNA sequence from clone DKEY-87H7 in linkage group 7, complete
              sequence
          Length = 187890

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     aaaaggagccaattgttgtt 95
              ||||||||||||||||||||
Sbjct: 125145 aaaaggagccaattgttgtt 125164
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>emb|BX005027.13| Zebrafish DNA sequence from clone DKEY-4C2 in linkage group 10, complete
              sequence
          Length = 241472

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    ttacagataattaagaaaca 143
              ||||||||||||||||||||
Sbjct: 104839 ttacagataattaagaaaca 104858
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
             complete sequence
          Length = 209195

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aaaaggagccaattgttgtt 95
             ||||||||||||||||||||
Sbjct: 12580 aaaaggagccaattgttgtt 12599
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>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
              sequence
          Length = 223392

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    agaaacattgtttagaagtt 156
              ||||||||||||||||||||
Sbjct: 221254 agaaacattgtttagaagtt 221235
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>gb|AF047671.1|AF047671 Homo sapiens dystrophin (DMD) gene, duplication junction in intron
           7
          Length = 657

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 acaccaactccaacattggg 246
           ||||||||||||||||||||
Sbjct: 435 acaccaactccaacattggg 454
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>gb|U60822.1|HSU60822 Human dystrophin (DMD) gene, exons 7, 8 and 9, and partial cds
          Length = 112359

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   acaccaactccaacattggg 246
             ||||||||||||||||||||
Sbjct: 45414 acaccaactccaacattggg 45433
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>emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, complete sequence
          Length = 165984

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    acaccaactccaacattggg 246
              ||||||||||||||||||||
Sbjct: 132513 acaccaactccaacattggg 132494


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,816,982
Number of Sequences: 3902068
Number of extensions: 2816982
Number of successful extensions: 60185
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60113
Number of HSP's gapped (non-prelim): 49
length of query: 275
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 253
effective length of database: 17,147,199,772
effective search space: 4338241542316
effective search space used: 4338241542316
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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