ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YNQ6_SCHPO (Q9UUD4) Hypothetical protein C19C2.06c in chromosome II 32 0.80

>YNQ6_SCHPO (Q9UUD4) Hypothetical protein C19C2.06c in chromosome II|
          Length = 145

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 196 RKRASILGAALHLFWCCFSYPLMCLRATNCLIPCF 300
           R+  + L   + L W  FS  +MC  A +C +PCF
Sbjct: 70  RRGIASLSVCVALHWIAFSCSVMCHFAWSCALPCF 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,145,422
Number of Sequences: 219361
Number of extensions: 822961
Number of successful extensions: 1570
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top