>gb|AC100812.2| Homo sapiens chromosome 8, clone CTD-2532N20, complete sequence
          Length = 209123

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 150   atacagaaacaatgaaaattactatac 176
             |||||||||||||||||| ||||||||
Sbjct: 69047 atacagaaacaatgaaaaatactatac 69073

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 293     cttgttttggattagctttaatc 315
               |||||||||||||||||||||||
Sbjct: 1675799 cttgttttggattagctttaatc 1675821

>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     gctttaatcgacaaagagtag 327
               |||||||||||||||||||||
Sbjct: 1106007 gctttaatcgacaaagagtag 1105987

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 391     tttagcaacctcttcagggt 410
               ||||||||||||||||||||
Sbjct: 1218300 tttagcaacctcttcagggt 1218319

>gb|AC008365.4| Drosophila melanogaster clone BACR03N12, complete sequence
          Length = 166693

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ttgttttggattagctttaa 313
              ||||||||||||||||||||
Sbjct: 134653 ttgttttggattagctttaa 134634

>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence
          Length = 215213

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    aaacaatgaaaattactata 175
              ||||||||||||||||||||
Sbjct: 200078 aaacaatgaaaattactata 200059

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     aacatgaatgatcaggaaac 202
               ||||||||||||||||||||
Sbjct: 5048866 aacatgaatgatcaggaaac 5048885

>ref|XM_387383.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07207.1)
           partial mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 tcatgaaccggatccctgca 385
           ||||||||||||||||||||
Sbjct: 758 tcatgaaccggatccctgca 777

>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aacatgaatgatcaggaaac 202
              ||||||||||||||||||||
Sbjct: 113320 aacatgaatgatcaggaaac 113339

>emb|X64412.1|DMORBR D.melanogaster orb mRNA
          Length = 4742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ttgttttggattagctttaa 313
            ||||||||||||||||||||
Sbjct: 4327 ttgttttggattagctttaa 4346

>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete
              sequence
          Length = 199838

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    aaacaatgaaaattactatacaga 179
              ||||||| ||||||||||||||||
Sbjct: 115851 aaacaataaaaattactatacaga 115874

>gb|AC079096.4| Homo sapiens chromosome 18, clone RP11-75N4, complete sequence
          Length = 119927

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ttgttatcaaatcaatctcc 47
             ||||||||||||||||||||
Sbjct: 60944 ttgttatcaaatcaatctcc 60925

>ref|NM_170064.1| Drosophila melanogaster oo18 RNA-binding protein CG10868-RC,
            transcript variant C (orb), mRNA
          Length = 2962

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ttgttttggattagctttaa 313
            ||||||||||||||||||||
Sbjct: 2547 ttgttttggattagctttaa 2566

>ref|NM_170062.1| Drosophila melanogaster oo18 RNA-binding protein CG10868-RB,
            transcript variant B (orb), mRNA
          Length = 4256

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ttgttttggattagctttaa 313
            ||||||||||||||||||||
Sbjct: 3841 ttgttttggattagctttaa 3860

>ref|NM_079736.2| Drosophila melanogaster oo18 RNA-binding protein CG10868-RA,
            transcript variant A (orb), mRNA
          Length = 4860

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ttgttttggattagctttaa 313
            ||||||||||||||||||||
Sbjct: 4445 ttgttttggattagctttaa 4464

>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    aacatgaatgatcaggaaac 202
              ||||||||||||||||||||
Sbjct: 120841 aacatgaatgatcaggaaac 120822

>gb|AC017100.4| Homo sapiens BAC clone RP11-549B18 from 18, complete sequence
          Length = 202950

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     ttgttatcaaatcaatctcc 47
              ||||||||||||||||||||
Sbjct: 181463 ttgttatcaaatcaatctcc 181482

>ref|NM_001015735.1| Xenopus tropicalis MGC107898 protein (MGC107898), mRNA
          Length = 1898

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 tctggtgctgcttcagctac 255
           ||||||||||||||||||||
Sbjct: 668 tctggtgctgcttcagctac 687

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 183     aacatgaatgatcaggaaac 202
               ||||||||||||||||||||
Sbjct: 5048081 aacatgaatgatcaggaaac 5048100

>gb|AC010670.8|AC010670 Drosophila melanogaster, chromosome 3R, region 94E-95A, BAC clone
             BACR01E13, complete sequence
          Length = 155957

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ttgttttggattagctttaa 313
             ||||||||||||||||||||
Sbjct: 41624 ttgttttggattagctttaa 41605

>gb|BC089669.1| Xenopus tropicalis MGC107898 protein, mRNA (cDNA clone MGC:107898
           IMAGE:7023649), complete cds
          Length = 1898

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 tctggtgctgcttcagctac 255
           ||||||||||||||||||||
Sbjct: 668 tctggtgctgcttcagctac 687

>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete
             sequence
          Length = 194715

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   gaaacaatgaaaattactat 174
             ||||||||||||||||||||
Sbjct: 83342 gaaacaatgaaaattactat 83323

>emb|BX545910.6| Mouse DNA sequence from clone RP23-459D6 on chromosome X, complete
             sequence
          Length = 92382

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   gaaacaatgaaaattactat 174
             ||||||||||||||||||||
Sbjct: 15954 gaaacaatgaaaattactat 15935

>gb|AE003742.4| Drosophila melanogaster chromosome 3R, section 80 of 118 of the complete
              sequence
          Length = 233746

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ttgttttggattagctttaa 313
              ||||||||||||||||||||
Sbjct: 151579 ttgttttggattagctttaa 151560

>emb|AL772296.6| Mouse DNA sequence from clone RP23-66O9 on chromosome 4, complete
              sequence
          Length = 191662

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    caggaaacgagccagcatac 214
              ||||||||||||||||||||
Sbjct: 152566 caggaaacgagccagcatac 152547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,199,174
Number of Sequences: 3902068
Number of extensions: 3199174
Number of successful extensions: 61483
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61365
Number of HSP's gapped (non-prelim): 118
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)