ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl32a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chr... 48 0.026
2emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 48 0.026
3gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 48 0.026
4gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 48 0.026
5emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chr... 46 0.10
6emb|AL391666.5| Human DNA sequence from clone RP13-130D24 on chr... 42 1.6
7gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Can... 42 1.6
8gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 42 1.6
9gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 42 1.6
10gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, com... 40 6.4
11gb|AY642814.1| Leucoagaricus gongylophorus isolate H internal tr... 40 6.4
12gb|AY642813.1| Leucoagaricus gongylophorus isolate I internal tr... 40 6.4
13gb|AY642812.1| Leucoagaricus gongylophorus isolate J internal tr... 40 6.4
14gb|AY642810.1| Leucoagaricus gongylophorus isolate L internal tr... 40 6.4
15gb|AY642809.1| Leucoagaricus gongylophorus isolate M internal tr... 40 6.4
16gb|AY642807.1| Leucoagaricus gongylophorus isolate O internal tr... 40 6.4
17ref|XM_323474.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
18ref|XM_956198.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
19gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds 40 6.4
20gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, co... 40 6.4
21gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 40 6.4
22emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 40 6.4
23emb|AL391063.14| Human DNA sequence from clone RP5-836N10 on chr... 40 6.4
24emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on ch... 40 6.4
25emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 6.4
26emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 40 6.4
27emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 40 6.4
28emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P1... 40 6.4
29emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 6.4
30emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 6.4
31gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 6.4
32emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmi... 40 6.4
33emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B... 40 6.4
34gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Canc... 40 6.4
35gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 6.4
36gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 6.4
37emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in... 40 6.4
38gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, p... 40 6.4
39dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 6.4
40gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complet... 40 6.4
41gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5,... 40 6.4
42gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, comple... 40 6.4
43gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, compl... 40 6.4
44gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clon... 40 6.4
45emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMW... 40 6.4
46dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.4
47dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.4
48gb|AC121944.4| Mus musculus BAC clone RP24-211H19 from chromosom... 40 6.4
49gb|AF076430.1|AF076430 Leucoagaricus gongylophorus clone 7 5.8S ... 40 6.4
50gb|AF076424.1|AF076424 Leucoagaricus gongylophorus clone 1 5.8S ... 40 6.4
51gb|AF076423.1|AF076423 Leucoagaricus gongylophorus clone 7 5.8S ... 40 6.4
52gb|AF076422.1|AF076422 Leucoagaricus gongylophorus clone 6 5.8S ... 40 6.4
53gb|AF076421.1|AF076421 Leucoagaricus gongylophorus clone 5 5.8S ... 40 6.4
54gb|AF076420.1|AF076420 Leucoagaricus gongylophorus clone 4 5.8S ... 40 6.4
55gb|AF076418.1|AF076418 Leucoagaricus gongylophorus clone 2 5.8S ... 40 6.4
56gb|AF076417.1|AF076417 Leucoagaricus gongylophorus clone 1 5.8S ... 40 6.4
57gb|AF076400.1|AF076400 Leucoagaricus gongylophorus clone 8 5.8S ... 40 6.4
58gb|AF076399.1|AF076399 Leucoagaricus gongylophorus clone 7 5.8S ... 40 6.4
59gb|AF076398.1|AF076398 Leucoagaricus gongylophorus clone 6 5.8S ... 40 6.4
60gb|AF076396.1|AF076396 Leucoagaricus gongylophorus clone 4 5.8S ... 40 6.4
61gb|AF076393.1|AF076393 Leucoagaricus gongylophorus clone 1 5.8S ... 40 6.4
62gb|AF076391.1|AF076391 Leucoagaricus gongylophorus clone 6 5.8S ... 40 6.4
63gb|AF076389.1|AF076389 Leucoagaricus gongylophorus clone 4 5.8S ... 40 6.4
64gb|AF076388.1|AF076388 Leucoagaricus gongylophorus clone 3 5.8S ... 40 6.4
65gb|AF076387.1|AF076387 Leucoagaricus gongylophorus clone 2 5.8S ... 40 6.4
66dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.4
67gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosom... 40 6.4
68emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from... 40 6.4
69emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 6.4
70emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chr... 40 6.4
71dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.4 
>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 115551

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 294   tcaaaactcaactgtatttctata 317
             ||||||||||||||||||||||||
Sbjct: 81214 tcaaaactcaactgtatttctata 81237
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>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||||||||||||||||||||||
Sbjct: 99133 caaaactcaactgtatttctatac 99110
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>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||||||||||||||||||||||
Sbjct: 72435 caaaactcaactgtatttctatac 72412
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>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 295    caaaactcaactgtatttctatac 318
              ||||||||||||||||||||||||
Sbjct: 126557 caaaactcaactgtatttctatac 126580
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>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5'
              end of the XPR1 gene for xenotropic and polytropic
              retrovirus receptor, complete sequence
          Length = 178375

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 295    caaaactcaactgtatttctata 317
              |||||||||||||||||||||||
Sbjct: 153626 caaaactcaactgtatttctata 153604
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>emb|AL391666.5| Human DNA sequence from clone RP13-130D24 on chromosome Xq21.31-22.1
              Contains a karyopherin (importin) beta 1 (KPNB1)
              pseudogene, complete sequence
          Length = 147080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     ctctgctttcagataaaaaac 81
              |||||||||||||||||||||
Sbjct: 130248 ctctgctttcagataaaaaac 130228
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>gb|AC092937.8| Homo sapiens 3q BAC RP11-114F20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188709

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 141   atcacaagaaactgaagaaatgcag 165
             |||||||||||||| ||||||||||
Sbjct: 60038 atcacaagaaactgtagaaatgcag 60014
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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 294   tcaaaactcaactgtatttctatac 318
             ||||||||||| |||||||||||||
Sbjct: 35876 tcaaaactcaattgtatttctatac 35852
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>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 294   tcaaaactcaactgtatttctatac 318
             |||||| ||||||||||||||||||
Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347
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>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aacaacaaaggcctgcacat 42
              ||||||||||||||||||||
Sbjct: 111162 aacaacaaaggcctgcacat 111143
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>gb|AY642814.1| Leucoagaricus gongylophorus isolate H internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 665

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 472 aaaggcctgcacatattttc 453
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>gb|AY642813.1| Leucoagaricus gongylophorus isolate I internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 642

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 453 aaaggcctgcacatattttc 434
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>gb|AY642812.1| Leucoagaricus gongylophorus isolate J internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 691

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 499 aaaggcctgcacatattttc 480
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>gb|AY642810.1| Leucoagaricus gongylophorus isolate L internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 436 aaaggcctgcacatattttc 417
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>gb|AY642809.1| Leucoagaricus gongylophorus isolate M internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 436 aaaggcctgcacatattttc 417
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>gb|AY642807.1| Leucoagaricus gongylophorus isolate O internal transcribed spacer
           1, partial sequence; 5.8S ribosomal RNA gene and
           internal transcribed spacer 2, complete sequence; and
           28S ribosomal RNA gene, partial sequence
          Length = 681

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 499 aaaggcctgcacatattttc 480
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>ref|XM_323474.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial
           mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 gaagccgaacaacaaaaaca 195
           ||||||||||||||||||||
Sbjct: 208 gaagccgaacaacaaaaaca 227
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>ref|XM_956198.1| Neurospora crassa OR74A hypothetical protein (NCU04135.1) partial
           mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 gaagccgaacaacaaaaaca 195
           ||||||||||||||||||||
Sbjct: 208 gaagccgaacaacaaaaaca 227
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>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  caaaactcaactgtatttctatac 318
            ||||| ||||||||||||||||||
Sbjct: 1838 caaaaatcaactgtatttctatac 1861
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>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence
          Length = 239758

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aacaacaaaggcctgcacat 42
              ||||||||||||||||||||
Sbjct: 147902 aacaacaaaggcctgcacat 147921
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 309   atttctatactgtaaaactatatc 332
             ||||||||| ||||||||||||||
Sbjct: 57869 atttctataatgtaaaactatatc 57892
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>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   tgtgcagaggccctgtcatg 447
             ||||||||||||||||||||
Sbjct: 81163 tgtgcagaggccctgtcatg 81182
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>emb|AL391063.14| Human DNA sequence from clone RP5-836N10 on chromosome 1 Contains the
             5' end of the gene for AD026 protein (AD026), a novel gene
             and a CpG island, complete sequence
          Length = 56943

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    atctcactaataaaacaaca 29
             ||||||||||||||||||||
Sbjct: 33934 atctcactaataaaacaaca 33953
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>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
             histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
             bone morphogenetic protein 15, and a high-mobility group
             box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||||||||||| ||||||||||
Sbjct: 74522 caaaactcaactgaatttctatac 74545
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>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
             CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   tcaaaactcaactgtatttctata 317
             |||||| |||||||||||||||||
Sbjct: 50834 tcaaaagtcaactgtatttctata 50811
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>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel
              gene, the 5' end of the CHAC gene for chorea acanthocytosis
              and a CpG island, complete sequence
          Length = 110633

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 295    caaaactcaactgtatttctatac 318
              |||||||||| |||||||||||||
Sbjct: 109107 caaaactcaattgtatttctatac 109084
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>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 42775 caaaattcaactgtatttctatac 42798
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>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1
             Contains a zinc finger protein 208 (ZNF208) pseudogene,
             complete sequence
          Length = 103367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             |||||||||| |||||||||||||
Sbjct: 67212 caaaactcaattgtatttctatac 67235
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>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 13232 caaaaatcaactgtatttctatac 13255
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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 294   tcaaaactcaactgtatttctata 317
             |||||| |||||||||||||||||
Sbjct: 20058 tcaaaaatcaactgtatttctata 20081
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>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 56889 caaaaatcaactgtatttctatac 56866
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>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6
          Length = 125561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gaagccgaacaacaaaaaca 195
             ||||||||||||||||||||
Sbjct: 77242 gaagccgaacaacaaaaaca 77261
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>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23
            Contains part of a novel gene for a protein similar to
            nuclear cap binding protein and the 5' end of the MID1
            gene for midline 1 (Opitz/BBB syndrome) protein, complete
            sequence
          Length = 94081

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  caaaactcaactgtatttctatac 318
            ||||| ||||||||||||||||||
Sbjct: 9071 caaaaatcaactgtatttctatac 9094
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>gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20925

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 280  caaaaaattcttcctcaaaa 299
            ||||||||||||||||||||
Sbjct: 8262 caaaaaattcttcctcaaaa 8243
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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  caaaactcaactgtatttctatac 318
            ||||| ||||||||||||||||||
Sbjct: 5161 caaaaatcaactgtatttctatac 5184
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>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 65642 caaaaatcaactgtatttctatac 65619
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>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1,
             complete sequence
          Length = 188290

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   aaaaaattcttcctcaaaac 300
             ||||||||||||||||||||
Sbjct: 61397 aaaaaattcttcctcaaaac 61416
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>gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 210 acatacatcaggtcgacaca 229
           ||||||||||||||||||||
Sbjct: 82  acatacatcaggtcgacaca 63
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>dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810431G11 product:glutathione
           S-transferase, alpha 4, full insert sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 275 tgtgtcaaaaaattcttcctcaaa 298
           |||||||| |||||||||||||||
Sbjct: 205 tgtgtcaagaaattcttcctcaaa 182
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>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence
          Length = 131085

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   aaaactcaactgtatttcta 315
             ||||||||||||||||||||
Sbjct: 85055 aaaactcaactgtatttcta 85036
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>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 40483 caaaaatcaactgtatttctatac 40506
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>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence
          Length = 202029

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    caaaactcaactgtatttctatac 318
              ||||| ||||||||||||||||||
Sbjct: 131285 caaaaatcaactgtatttctatac 131308
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>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   caaaactcaactgtatttctatac 318
             ||||| ||||||||||||||||||
Sbjct: 55239 caaaaatcaactgtatttctatac 55216
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>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence
          Length = 178237

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    aaaaaattcttcctcaaaac 300
              ||||||||||||||||||||
Sbjct: 139920 aaaaaattcttcctcaaaac 139939
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>emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMWG0704
          Length = 521

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 ttacgatgacacatcaccag 257
           ||||||||||||||||||||
Sbjct: 347 ttacgatgacacatcaccag 328
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    aaaaaattcttcctcaaaac 300
              ||||||||||||||||||||
Sbjct: 276715 aaaaaattcttcctcaaaac 276734
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>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
              sequence
          Length = 152472

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    caaaactcaactgtatttctatac 318
              ||||| ||||||||||||||||||
Sbjct: 113042 caaaaatcaactgtatttctatac 113065
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>gb|AC121944.4| Mus musculus BAC clone RP24-211H19 from chromosome 1, complete sequence
          Length = 154484

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tttctcattccctgacctct 64
              ||||||||||||||||||||
Sbjct: 112173 tttctcattccctgacctct 112192
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>gb|AF076430.1|AF076430 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 371

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 221 aaaggcctgcacatattttc 202
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>gb|AF076424.1|AF076424 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 372

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 221 aaaggcctgcacatattttc 202
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>gb|AF076423.1|AF076423 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 820

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076422.1|AF076422 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 829

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076421.1|AF076421 Leucoagaricus gongylophorus clone 5 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 836

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 167 aaaggcctgcacatattttc 148
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>gb|AF076420.1|AF076420 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 881

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076418.1|AF076418 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 883

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076417.1|AF076417 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 876

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 211 aaaggcctgcacatattttc 192
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>gb|AF076400.1|AF076400 Leucoagaricus gongylophorus clone 8 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076399.1|AF076399 Leucoagaricus gongylophorus clone 7 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076398.1|AF076398 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 871

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076396.1|AF076396 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 830

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076393.1|AF076393 Leucoagaricus gongylophorus clone 1 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 974

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076391.1|AF076391 Leucoagaricus gongylophorus clone 6 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 818

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076389.1|AF076389 Leucoagaricus gongylophorus clone 4 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 762

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076388.1|AF076388 Leucoagaricus gongylophorus clone 3 5.8S ribosomal RNA gene, and
           internal transcribed spacer 2, partial sequence
          Length = 369

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>gb|AF076387.1|AF076387 Leucoagaricus gongylophorus clone 2 5.8S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 648

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaaggcctgcacatattttc 48
           ||||||||||||||||||||
Sbjct: 217 aaaggcctgcacatattttc 198
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>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 286   attcttcctcaaaactcaactgta 309
             |||||||| |||||||||||||||
Sbjct: 90541 attcttccacaaaactcaactgta 90518
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>gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosome 1, complete sequence
          Length = 202877

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     tttctcattccctgacctct 64
              ||||||||||||||||||||
Sbjct: 148842 tttctcattccctgacctct 148861
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>emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from PAC RP4-646P19 map 21q21
            region D21S189-LA297, complete sequence
          Length = 121360

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  aaaaaattcttcctcaaaac 300
            ||||||||||||||||||||
Sbjct: 1095 aaaaaattcttcctcaaaac 1076
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>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 282   aaaaattcttcctcaaaactcaac 305
             |||||||||||||| |||||||||
Sbjct: 58235 aaaaattcttcctctaaactcaac 58212
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>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
             sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   aattcttcctcaaaactcaa 304
             ||||||||||||||||||||
Sbjct: 23072 aattcttcctcaaaactcaa 23053
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>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete
            sequence
          Length = 160952

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 286  attcttcctcaaaactcaactgta 309
            |||||||| |||||||||||||||
Sbjct: 8941 attcttccacaaaactcaactgta 8918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,660,492
Number of Sequences: 3902068
Number of extensions: 5660492
Number of successful extensions: 116513
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116390
Number of HSP's gapped (non-prelim): 123
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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