ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl32a01 |
|---|---|
| Clone Library Name | barley_pub |
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 273 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256
>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1108 Score = 43.5 bits (101), Expect = 2e-04 Identities = 21/65 (32%), Positives = 34/65 (52%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 E E EK+R K E+QK + L + M S Y EK P +++E++ KL ++ + Sbjct: 1036 EAEQEKIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFEKES 1095 Query: 269 KKLDA 255 +L A Sbjct: 1096 ARLAA 1100
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 42.7 bits (99), Expect = 4e-04 Identities = 22/59 (37%), Positives = 33/59 (55%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 273 E E+ KL K+ +++K LS+K+ Y+EK P VQE+D KL +L + EA Sbjct: 1151 EKEVPKLMGKKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVKEA 1209
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 42.4 bits (98), Expect = 5e-04 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 273 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 42.4 bits (98), Expect = 5e-04 Identities = 24/57 (42%), Positives = 30/57 (52%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 273 EL KL+ KR E Q+ L ++ AS Y K P VQE D KL +LR + EA Sbjct: 1199 ELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255
>SYV_ACIAD (Q6F8F0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 971 Score = 39.7 bits (91), Expect = 0.003 Identities = 21/65 (32%), Positives = 38/65 (58%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 + EL +L+K D++QK ++ K+ G+ KAP +V E + KL F +QL I ++ Sbjct: 906 KAELGRLQKDLDKVQKQHDQIASKLANEGFVAKAPAAVVEGEKVKLAEFADQLVKIKQSM 965 Query: 269 KKLDA 255 +++ A Sbjct: 966 EQIAA 970
>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 878 Score = 37.7 bits (86), Expect = 0.013 Identities = 19/56 (33%), Positives = 31/56 (55%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 282 E E E+L K+ ++ L+QK+ G+ KAP V ++ KLTAF+ + V+ Sbjct: 812 EKEKERLNKELKKVLAEIERLNQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867
>SYV_CLOTE (Q891R5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 37.4 bits (85), Expect = 0.017 Identities = 19/63 (30%), Positives = 35/63 (55%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 E E+E+L K+R++++K + +K+ + +KAP +V E+ K + E L + E Sbjct: 817 EKEMERLNKEREKLEKEIERVDKKLSNENFVKKAPEAVVNEEKAKGEKYKEMLEAVLERI 876 Query: 269 KKL 261 K L Sbjct: 877 KSL 879
>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 35.4 bits (80), Expect = 0.066 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 E E+ +L K+ ++++K + +K+ G+ KAP V EE+ +K + E+ + Sbjct: 816 EEEIARLEKEENKLEKEVERVQKKLSNQGFLAKAPEKVIEEERKKEADYLEKRAAVRARI 875 Query: 269 KKL 261 K+L Sbjct: 876 KEL 878
>SYV_GEOKA (Q5KWL3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 34.7 bits (78), Expect = 0.11 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 282 E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 816 EEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 34.7 bits (78), Expect = 0.11 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 282 E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 816 EEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + K Sbjct: 883 ETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAK 942 Query: 263 L 261 L Sbjct: 943 L 943
>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + K Sbjct: 883 ETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQTQLSK 942 Query: 263 L 261 L Sbjct: 943 L 943
>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/61 (29%), Positives = 31/61 (50%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 E +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + K Sbjct: 883 ETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAK 942 Query: 263 L 261 L Sbjct: 943 L 943
>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 899 Score = 34.3 bits (77), Expect = 0.15 Identities = 19/63 (30%), Positives = 36/63 (57%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 E ++L K+ +++K S+K+ + KAP +V E+D +KL E+L ++ + +K Sbjct: 835 EQKRLNKEIAKVEKDVLMFSKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILKQGLEK 894 Query: 263 LDA 255 L A Sbjct: 895 LAA 897
>HLYB_TREHY (Q54316) Hemolysin B| Length = 828 Score = 30.4 bits (67), Expect(2) = 0.18 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = -3 Query: 437 EKLRKKRDEIQKLQHALSQKME-ASGYREKAPPSVQEEDMRKLTAFFEQL---RVIGEAE 270 E K RDEI LQ LS+K E REK ++E+D+R + + + R++ Sbjct: 446 EDAAKIRDEITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSES 505 Query: 269 KKL 261 K+L Sbjct: 506 KRL 508 Score = 22.3 bits (46), Expect(2) = 0.18 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -2 Query: 234 VGSLFLLGPTGI---FVWKLILHLFFADGGGVTFIENS 130 +GS LGPTG+ + K++ F D + I+ S Sbjct: 547 LGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMS 584
>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 865 Score = 33.9 bits (76), Expect = 0.19 Identities = 20/53 (37%), Positives = 29/53 (54%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 291 E E E+L++ ++IQK L +K+ + EKAP V EE KL E+L Sbjct: 802 EKEKERLKQIMEKIQKEIDRLEKKLANKDFVEKAPEEVVEETKEKLNTNRERL 854
>SYV_CLOAB (Q97GG8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 33.5 bits (75), Expect = 0.25 Identities = 16/56 (28%), Positives = 32/56 (57%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGE 276 E+E+L K++D+++ + +K+ G+ +KAP SV E + K + + L + E Sbjct: 820 EIERLSKEKDKLKAEIQRVDKKLSNKGFVDKAPESVVEAERVKGEKYKKMLEAVEE 875
>SYV_CHRVO (Q7NUM8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 282 E +LRK++ +++ L+ K+E GY +KAP + E D +L ++L I Sbjct: 878 ETARLRKEQGKVEAELAKLTAKLEKPGYVDKAPAHLVERDKAQLAELNDKLEKI 931
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.7 bits (73), Expect = 0.43 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = -3 Query: 446 VELEKLRKKRD----EIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 279 +++E+ R++++ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 278 EA 273 EA Sbjct: 856 EA 857
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.7 bits (73), Expect = 0.43 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = -3 Query: 446 VELEKLRKKRD----EIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 279 +++E+ R++++ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 278 EA 273 EA Sbjct: 856 EA 857
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.7 bits (73), Expect = 0.43 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = -3 Query: 446 VELEKLRKKRD----EIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG 279 +++E+ R++++ E+ L +K+ + G+REKAP V E + +L EQ I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLRENLEQAERIR 855 Query: 278 EA 273 EA Sbjct: 856 EA 857
>SYV_PASMU (Q9CMK5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 954 Score = 32.3 bits (72), Expect = 0.56 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 E EL +L K+ ++ Q + K+ + KAPP+V E++ K+ + E L + + Sbjct: 889 EAELARLNKEIEKYQGEIQRIENKLANEAFVAKAPPAVIEKERAKMAEYAEGLNKLKQQY 948 Query: 269 KKLDA 255 ++A Sbjct: 949 LAIEA 953
>SYV_BACLD (Q65GK8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 32.0 bits (71), Expect = 0.73 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 315 E+ +L+K+ D++ K + +K+ G+ +KAP V EE+ K Sbjct: 818 EISRLQKELDKLTKEVERVQKKLSNEGFMKKAPAHVIEEERAK 860
>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 31.6 bits (70), Expect = 0.95 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 E+ +L K+ D++ K + +K+ G+ KAP V EE+ K + + + + E + Sbjct: 818 EVARLEKELDKLNKEVERIEKKLNNQGFLAKAPSHVVEEEKAKQQDYAAKRQTVIERIAE 877 Query: 263 LDA 255 L A Sbjct: 878 LKA 880
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 324 E ++E+L++K ++ QKL L ++E ++ PP Q D Sbjct: 561 EKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQRPPDPQPSD 602
>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -3 Query: 434 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQ---EEDMRKLTAFFEQLRVIGEAEKK 264 KLR+ DE LQ L ++MEA E+ ++ + +KL F + V+ E +K+ Sbjct: 1337 KLRQLEDERNSLQDQLDEEMEAKQNLERHVSTLNIQLSDSKKKLQDFASTIEVMEEGKKR 1396 Query: 263 L 261 L Sbjct: 1397 L 1397
>GRAP1_MOUSE (Q8VD04) GRIP1-associated protein 1 (GRASP-1) (HCMV-interacting| protein) Length = 806 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -3 Query: 443 ELEKLRKKRDEI-QKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEK 267 EL LR++ E+ +LQH ++ E G ++ +QE +R + EQL+ IG+ ++ Sbjct: 320 ELNMLREQTSELASELQHRQAEYEELMGQKDDLNSQLQES-LRANSRLLEQLQEIGQEKE 378 Query: 266 KL 261 +L Sbjct: 379 QL 380
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 30.4 bits (67), Expect = 2.1 Identities = 17/65 (26%), Positives = 32/65 (49%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 + EL +L K+ +Q + K+ + + +KAPP+V E++ KL + L E Sbjct: 883 DAELARLNKEIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFTEQH 942 Query: 269 KKLDA 255 ++ A Sbjct: 943 ARIAA 947
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEA-SGY-----REKAPPSVQEEDMRKLTAFFEQL 291 E +L + KK++E+ KLQH +K+EA SG +E+ S++EE + +F + Sbjct: 111 EAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDI 169
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/61 (32%), Positives = 33/61 (54%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 ELEK+RK+ + ++KME E+A S++ E+ + L A E ++ E E+K Sbjct: 1525 ELEKVRKQLE---------AEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575 Query: 263 L 261 L Sbjct: 1576 L 1576
>Y157_AQUAE (O66547) Hypothetical protein aq_157 precursor| Length = 162 Score = 29.6 bits (65), Expect = 3.6 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIG-EAEK 267 ELEK +K E QK AL + +E+ EKA +E+ +++ ++LR + EA+ Sbjct: 49 ELEKYQKLIQEKQKKLEALKKSLESKALSEKA----KEKKAKEIEQLEDELRKLQVEAQS 104 Query: 266 KL 261 KL Sbjct: 105 KL 106
>HMMR_RAT (P97779) Hyaluronan-mediated motility receptor (Intracellular| hyaluronic acid-binding protein) (Receptor for hyaluronan-mediated motility) Length = 498 Score = 29.6 bits (65), Expect = 3.6 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQH-------ALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 291 +V EKL +R E +KLQ L Q+ E S + ++ S QEE + F EQL Sbjct: 104 QVLTEKLLLERQEYEKLQQNELQSQSLLQQEKELSAHLQQQLCSFQEEMTSERNVFKEQL 163 Query: 290 RVIGEAEKKLDA 255 ++ A +LDA Sbjct: 164 KL---ALDELDA 172
>SYV_OCEIH (Q8EPN2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 883 Score = 29.6 bits (65), Expect = 3.6 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 315 E EL K K+ + +QK K+ G+ KAP SV EE+ RK Sbjct: 827 ENELAKWTKEVERVQK-------KLSNQGFVSKAPESVVEEEKRK 864
>CALD1_CHICK (P12957) Caldesmon (CDM)| Length = 771 Score = 29.6 bits (65), Expect = 3.6 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -3 Query: 446 VELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEK 267 VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K + R AEK Sbjct: 522 VELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKKRMKEEIERRRAEAAEK 577 Query: 266 K 264 + Sbjct: 578 R 578
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1934 Score = 29.6 bits (65), Expect = 3.6 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 ELEK+RK+ + ++KME E+A S++ E+ L A E ++ E E+K Sbjct: 1524 ELEKIRKQLE---------AEKMELQSALEEAEASLEHEEGNILRAQLEFNQIKAEIERK 1574 Query: 263 L 261 L Sbjct: 1575 L 1575
>CALD1_MELGA (P13505) Caldesmon, smooth muscle (CDM) (Fragment)| Length = 274 Score = 29.6 bits (65), Expect = 3.6 Identities = 19/61 (31%), Positives = 35/61 (57%) Frame = -3 Query: 446 VELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEK 267 VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K + R AEK Sbjct: 25 VELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKKRMKEEIERRRAEAAEK 80 Query: 266 K 264 + Sbjct: 81 R 81
>SYV_STAHJ (Q4L703) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 876 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQ 294 E+ +L K+ D++QK + +K+ + KAP V E+ K + E+ Sbjct: 814 EIARLEKELDKLQKELDRVDKKLSNENFVNKAPEKVINEEKEKQQRYQEK 863
>SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 312 E EL +L K+ + K L K+ + + KAPP+V E++ +L Sbjct: 856 EAELTRLDKEIQRLDKELPRLEGKLGDASFLSKAPPAVVEKEKARL 901
>SYV_CLOPE (Q8XJ42) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGE 276 E ELE+L K++ +++ + +K+ + KAP +V E+ K + E L + E Sbjct: 817 EKELERLNKEKTKLEGEILRVEKKLSNERFVSKAPEAVVNEERAKGVKYKEMLEAVLE 874
>JIP3_MOUSE (Q9ESN9) C-jun-amino-terminal kinase-interacting protein 3| (JNK-interacting protein 3) (JIP-3) (JNK MAP kinase scaffold protein 3) (Mitogen-activated protein kinase 8-interacting protein 3) (JNK/SAPK-associated protein 1) (JSAP1) (Sunday drive Length = 1337 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = +2 Query: 86 KRKAVVRNWSFIVPFEFSINVTPPPSAKKRCSINFQTKMPVGPNRNREPTQKHCQIT 256 K+K+ + W F FS + +PPP+ + S+N K P ++ + CQI+ Sbjct: 568 KKKSTI--WQFFSRL-FSSSSSPPPAKRSYPSVNIHYKSPTAAGFSQRRSHALCQIS 621
>CALD1_RAT (Q62736) Non-muscle caldesmon (CDM) (L-caldesmon)| Length = 531 Score = 29.3 bits (64), Expect = 4.7 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -3 Query: 446 VELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEK 267 +ELE+L+KKR+E +K+ Q+ + KA +EE+ R+L E+ R EA + Sbjct: 302 LELEELKKKREERRKVLEEEEQRRKQEEADRKAR---EEEEKRRLKEEIERRR--AEAAE 356 Query: 266 K 264 K Sbjct: 357 K 357
>INCE_CHICK (P53352) Inner centromere protein| Length = 877 Score = 29.3 bits (64), Expect = 4.7 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAE 270 ++E + R+++DE + Q AL Q+ E ++E +EE+ + EQ + E E Sbjct: 599 KMEEAEARRRQDEEARKQKALQQEEEERRHKELMQKK-KEEEQERARKIAEQRQAEQERE 657 Query: 269 KKLDA 255 K+L A Sbjct: 658 KQLAA 662
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 29.3 bits (64), Expect = 4.7 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 ELEK+RK+ + ++K+E E+A S++ E+ + L A E ++ E E+K Sbjct: 1525 ELEKIRKQLE---------AEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575 Query: 263 L 261 L Sbjct: 1576 L 1576
>CCNE1_MOUSE (Q61457) G1/S-specific cyclin-E1| Length = 491 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Frame = +2 Query: 2 EPSRPSISHFREVAFE----VDTQHSQINIIYK---RKAVVRNWSFIVPFEFSINVTPPP 160 E + HFR V E + T + ++++ K +KA++ + I P S+ +TPPP Sbjct: 338 EMGSSKLKHFRGVPMEDSHNIQTHTNSLDLLDKAQAKKAILSEQNRISPPP-SVVLTPPP 396 Query: 161 SAKK 172 S+KK Sbjct: 397 SSKK 400
>RAD50_THEMA (Q9X1X1) Probable DNA double-strand break repair rad50 ATPase| Length = 852 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 18/75 (24%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYR-----------------EKAPPSVQEEDM 321 E +L++ RKK +I++ +H++SQK+ A+ + ++ Q E+M Sbjct: 522 EEKLDEKRKKLRKIEEERHSISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEM 581 Query: 320 RKLTA-FFEQLRVIG 279 +L + FF++LR IG Sbjct: 582 DQLKSDFFDRLRKIG 596
>CDC37_RAT (Q63692) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 28.9 bits (63), Expect = 6.2 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 342 +VELE+LR + +++K + + QK+E +EK P Sbjct: 79 QVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>CDC37_MOUSE (Q61081) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 28.9 bits (63), Expect = 6.2 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 342 +VELE+LR + +++K + + QK+E +EK P Sbjct: 79 QVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1939 Score = 28.9 bits (63), Expect = 6.2 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 ELEK+RK+ + +KME E+A S++ E+ + L A E ++ E E+K Sbjct: 1527 ELEKVRKQLEV---------EKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577 Query: 263 L 261 L Sbjct: 1578 L 1578
>SYV_COXBU (Q83DD0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 920 Score = 28.9 bits (63), Expect = 6.2 Identities = 12/46 (26%), Positives = 27/46 (58%) Frame = -3 Query: 449 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 312 + E+ +L+K+ ++QK + +K++ Y ++AP V E++ L Sbjct: 855 QTEIARLKKEISKLQKEEEKSLKKLDNPNYLQRAPQEVVEKERLSL 900
>SYV_PSEU2 (Q4ZXI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 263 L 261 + Sbjct: 945 I 945
>SYV_PSESM (Q887M3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPDVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 263 L 261 + Sbjct: 945 I 945
>SYV_PSE14 (Q48MF2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -3 Query: 443 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 264 EL +L K+ +Q + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 263 L 261 + Sbjct: 945 I 945
>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3| domains) (Adapter protein CMS) Length = 639 Score = 28.5 bits (62), Expect = 8.1 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +3 Query: 162 PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLLSLTDDPQLLEKGGELPHVLL 332 P+K + + K Q V I +TE ++K+ R F T++ +L K GE+ H++ Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300 Query: 333 LDTG 344 +TG Sbjct: 301 KETG 304
>PALM_CHICK (Q9YGL6) Paralemmin| Length = 386 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -3 Query: 449 EVELE-KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 324 + E+E K R+ D+ ++LQH S+ + E AP S EED Sbjct: 24 QTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEED 66 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,040,175 Number of Sequences: 219361 Number of extensions: 1206139 Number of successful extensions: 4184 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 4063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4181 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
