ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl31h01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 80.5 bits (197), Expect = 9e-16 Identities = 36/37 (97%), Positives = 37/37 (100%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 DP+RRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI Sbjct: 863 DPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 899
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 68.9 bits (167), Expect = 3e-12 Identities = 29/37 (78%), Positives = 34/37 (91%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D R+NRCGAGVLPYEL+APSS PG+TCRGVPNS++I Sbjct: 882 DHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 57.4 bits (137), Expect = 8e-09 Identities = 22/37 (59%), Positives = 31/37 (83%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 +P +NRCGAG++PYEL+ P S PG+T RG+PNS++I Sbjct: 860 NPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 50.1 bits (118), Expect = 1e-06 Identities = 21/37 (56%), Positives = 27/37 (72%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D +NRCGAG+LPY+LM P S G+T G+PNS +I Sbjct: 888 DRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 50.1 bits (118), Expect = 1e-06 Identities = 21/37 (56%), Positives = 27/37 (72%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D +NRCGAG+LPY+LM P S G+T G+PNS +I Sbjct: 905 DRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 47.0 bits (110), Expect = 1e-05 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D + RNR G +PY L+ PSS G+TCRG+PNS++I Sbjct: 830 DESLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI 866
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 46.6 bits (109), Expect = 1e-05 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D RNRCG +PY L+ PSS G+T RG+PNS++I Sbjct: 821 DEKLRNRCGPVQMPYTLLLPSSKEGLTFRGIPNSISI 857
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D RNR G +PY L+ PSS G+T RG+PNS++I Sbjct: 817 DETLRNRYGPAKMPYTLLYPSSEEGLTFRGIPNSISI 853
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 DP+ RNR G LPY L+ SS G+T +G+PNS++I Sbjct: 828 DPSLRNRTGPVQLPYTLLHRSSEEGLTFKGIPNSISI 864
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 42.4 bits (98), Expect = 3e-04 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 DP+ +R G LPY L+ PSS G+T RG+PNS++I Sbjct: 828 DPSLYHRVGPVQLPYTLLHPSSKEGLTFRGIPNSISI 864
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 41.6 bits (96), Expect = 5e-04 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D +NR G +PY L+ PSS G+T RG+PNSV+I Sbjct: 823 DETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 41.6 bits (96), Expect = 5e-04 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D RNR G +PY L+ PSS G+T RG+PNS++I Sbjct: 825 DEKLRNRHGPVEMPYTLLYPSSKEGLTFRGIPNSISI 861
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -3 Query: 292 RNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 +NR GAGV+ YEL+ P+S G+T GVP S++I Sbjct: 864 KNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 40.8 bits (94), Expect = 8e-04 Identities = 19/37 (51%), Positives = 26/37 (70%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 D + NR G LPY L+ P+S G+TCRG+PNS++I Sbjct: 830 DQSLSNRLGPVQLPYTLLHPNS-EGLTCRGIPNSISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 40.8 bits (94), Expect = 8e-04 Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = -3 Query: 304 DPARR-NRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 DP+ + NR G LPY L+ PSS G+T RG+PNS++I Sbjct: 802 DPSLQGNRLGPVQLPYTLLYPSSEEGLTFRGIPNSISI 839
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 39.3 bits (90), Expect = 0.002 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 5/42 (11%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCR-----GVPNSVTI 194 D +RRNR GAGV+PY L+ P +G + + G+PNS++I Sbjct: 891 DDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 38.9 bits (89), Expect = 0.003 Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 6/43 (13%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 194 DP +NR G PY LM P++ GIT RG+PNS++I Sbjct: 821 DPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 37.4 bits (85), Expect = 0.009 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 10/47 (21%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPG----------ITCRGVPNSVTI 194 DP R+NR GAG++PY L+ PS G + G+PNS++I Sbjct: 890 DPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>DHX34_HUMAN (Q14147) Probable ATP-dependent RNA helicase DHX34 (EC 3.6.1.-)| (DEAH box protein 34) Length = 576 Score = 37.4 bits (85), Expect = 0.009 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -1 Query: 324 RSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRT 205 +SS TPP ++ AP CC SW RP A+ AE +RT Sbjct: 538 QSSPECCTPPASSLAAPRCCTHRSW--RPATATEAETTRT 575
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 37.4 bits (85), Expect = 0.009 Identities = 16/33 (48%), Positives = 24/33 (72%) Frame = -3 Query: 292 RNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 +NR G +PY L+ P+S G+T +G+PNSV+I Sbjct: 827 KNRSGPVNVPYTLLFPTSEEGLTGKGIPNSVSI 859
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 37.0 bits (84), Expect = 0.011 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 6/43 (13%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 194 DP R+NR G PY L+ P++ G++ RG+PNS++I Sbjct: 828 DPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 35.4 bits (80), Expect = 0.032 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = -3 Query: 289 NRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 NR G PY L+ P+S G+T +G+PNSV+I Sbjct: 829 NRTGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 860
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 35.4 bits (80), Expect = 0.032 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = -3 Query: 289 NRCGAGVLPYELMAPSSGPGITCRGVPNSVTI 194 NR G PY L+ P+S G+T +G+PNSV+I Sbjct: 830 NRSGPVNAPYTLLFPTSEGGLTGKGIPNSVSI 861
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 35.0 bits (79), Expect = 0.042 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 6/43 (13%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 194 DP +NR G PY L+ P++ G+T +G+PNS++I Sbjct: 820 DPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 34.7 bits (78), Expect = 0.055 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPS-SGPGITCRGVPNSVTI 194 D + RNR G +PY ++ P+ G+T RG+PNS++I Sbjct: 825 DSSLRNRNGPVKMPYTVLLPTCEDEGLTFRGIPNSISI 862
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 34.3 bits (77), Expect = 0.072 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGPGITCRGV 212 D RNR G +PY L+ PSS G+T RG+ Sbjct: 711 DETLRNRTGPAKMPYTLLYPSSEEGLTFRGI 741
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 33.1 bits (74), Expect = 0.16 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Frame = -3 Query: 304 DPARRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 194 D +NR G PY L+ P++ GIT +G+PNS++I Sbjct: 824 DAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 32.3 bits (72), Expect = 0.27 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 7/42 (16%) Frame = -3 Query: 298 ARRNRCGAGVLPYELMAPSS-------GPGITCRGVPNSVTI 194 A +NR G +PY L+ P++ G G+T G+PNS++I Sbjct: 836 ALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>ZDS_MAIZE (Q9ZTP4) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 570 Score = 31.2 bits (69), Expect = 0.61 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = -1 Query: 336 APRRRSSGATLTPP-GATAVAPACCRTS-SWRRRPGRASPAEASRTASP 196 APRR G L PP A+AVA TS +WR+R R P E P Sbjct: 15 APRRARPGTGLVPPRRASAVAARSTVTSPTWRQRSQRLFPPEPEHYRGP 63
>NET2_HUMAN (O00634) Netrin-2-like protein precursor| Length = 580 Score = 31.2 bits (69), Expect = 0.61 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = -1 Query: 333 PRRRSSGATLTPPGATAVAPACCRTSSWRRRP 238 PRR S A LT PG TA +P C R+ S R P Sbjct: 72 PRRAHSPALLTSPGGTA-SPLCWRSESLPRAP 102
>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 581 Score = 31.2 bits (69), Expect = 0.61 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPAC-CRTSSWRRRPGRASPAEAS-RTASPS 193 A+P + S T PPG + A A T R PGRASPA+AS ASP+ Sbjct: 39 ASPAQASPAGT--PPGRASPAQASPAGTPPGRASPGRASPAQASPARASPA 87 Score = 31.2 bits (69), Expect = 0.61 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPAC-CRTSSWRRRPGRASPAEASRTASP---SSPQRVN 175 A+P + S T PPG + A A + S PGRASPA+AS +P +SP R + Sbjct: 19 ASPAQASPAGT--PPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRAS 75 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 333 PRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPS 193 P R+S A +P G + R S + P RASPA AS + S S Sbjct: 50 PPGRASPAQASPAGTPPGRASPGRASPAQASPARASPALASLSRSSS 96
>PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase| priA) (Replication factor Y) Length = 811 Score = 30.8 bits (68), Expect = 0.80 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = +2 Query: 152 KNSHGPLQFTLCGL-DGDAVRDASAGDARPGRRRHELVRQHAG--ATAVAPGGVSVAPLD 322 K H PL TL G+ DGD + GD R R H+L+ Q AG A PG V + +D Sbjct: 629 KGHHFPL-ITLVGVVDGDL--GLTGGDLRASERTHQLLHQVAGRAGRAERPGRVLIQTVD 685
>Y1013_HAEIN (Q57151) Hypothetical protein HI1013| Length = 258 Score = 30.8 bits (68), Expect = 0.80 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +2 Query: 44 NQWRFGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTLCGLDGDAVRDASA 223 N+ F R E + F Y+ L+P +PAQ + + + HG GD + Sbjct: 13 NEVPFLDRFEAAAKAGFKYVEFLWPYDYPAQELKAILDKHGLKVVLFNTPAGDVNKGEWG 72 Query: 224 GDARPGR 244 G A PGR Sbjct: 73 GSAIPGR 79
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS-PQRVN 175 A P RS+ T T TA+ P+ ++W R +P TA+PSS P+ V+ Sbjct: 3192 ALPALRSTATTPTATSVTAI-PSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVH 3246 Score = 29.3 bits (64), Expect = 2.3 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS-PQRVN 175 A P RS+ T T TA+ P+ ++W R +P TA+PSS P+ V+ Sbjct: 4447 ALPALRSTATTPTATSFTAI-PSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVH 4501 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS-PQRVN 175 A P RS+ T T TA+ P+ ++W R +P TA+PSS P+ V+ Sbjct: 3720 ALPALRSTATTPTATSFTAI-PSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVH 3774 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS-PQRVN 175 A P RS+ T T TA+ P+ ++W R +P TA+PSS P+ V+ Sbjct: 1964 ALPALRSTATTPTATSFTAI-PSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVH 2018 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS 190 A P RS+ T T T + P+ ++W R +P TA+PSS Sbjct: 2493 ALPALRSTATTPTATSVTPI-PSSSLGTTWTRLSQTTTPTATMSTATPSS 2541
>HCN2_RAT (Q9JKA9) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 Length = 863 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/67 (35%), Positives = 31/67 (46%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGPWE 157 A R S+ P GA A +PA + P R PA +RTA+P SP R + + P Sbjct: 788 ASRPLSASQPSLPHGAPAPSPAASARPASSSTP-RLGPAPTTRTAAP-SPDRRDSASPGA 845 Query: 156 FFSLDIL 136 LD L Sbjct: 846 ASGLDPL 852
>ABF2_BACSU (P94552) Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) (Arabinosidase| 2) Length = 495 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 119 ETFPAQSISRLKNSHGPLQFTLCGLD 196 ETFP SIS K + G + T+C +D Sbjct: 395 ETFPQISISASKQAEGDINITICNID 420
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -1 Query: 333 PRRRSSGATLTP-PGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQR 181 PR R+ P P A A A A R P ASPA +S + PS+ R Sbjct: 137 PRSRAGSGPRPPTPAALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAAPR 188
>VGLG_SIGMA (P12647) Spike glycoprotein precursor| Length = 526 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +1 Query: 280 HSGCAGRGQRCAARSPPRRG 339 H GC G G RC +PP RG Sbjct: 212 HLGCMGGGSRCWKSAPPHRG 231
>PARE_HAEIN (P43703) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase| IV subunit B) Length = 632 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 127 PGPKYIEAEKFPRSASIHSLRARW*RCSG 213 P PKY ++ KF S H LRA+ CSG Sbjct: 169 PNPKYFDSAKFSVSRLRHLLRAKAVLCSG 197
>KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2| Length = 838 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/23 (65%), Positives = 15/23 (65%) Frame = +1 Query: 292 AGRGQRCAARSPPRRGALPPRTL 360 AG GQ CA RSPP R A PP L Sbjct: 709 AGAGQVCACRSPPTR-ARPPAPL 730
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 28.9 bits (63), Expect = 3.0 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +2 Query: 173 QFTLCGLDGDAVRDASAGDARPGRRRHELVRQHAGATAVAPGGVSVAPLDLLLG 334 +F L G D D R S +A PG + + Q TAV P+D LLG Sbjct: 197 EFCLAG-DSDTQRYTSYANANPGEKGGKFYAQFNKDTAVTSPKREFCPVDYLLG 249
>ASCL2_RAT (P19360) Achaete-scute homolog 2| Length = 260 Score = 28.9 bits (63), Expect = 3.0 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 163 A R SG LTP AT + C + S ASPA AS + + +SP R+ S P Sbjct: 179 AVRAALSGGLLTP--ATRPSDVCTQPS--------ASPASASLSCTSTSPDRLGCSEP 226
>BGAL_PSEHA (P81650) Beta-galactosidase (EC 3.2.1.23) (Lactase)| (Beta-D-galactoside galactohydrolase) Length = 1038 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 38 GPNQWRFGLR-GEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTL 184 G + W +G G+ N +F +LFP+ P S+ K S LQFTL Sbjct: 580 GKHYWAYGGDFGDELNDRQFCINGLLFPDRTPHPSLFEAKYSQQHLQFTL 629
>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) (Glycoprotein B) Length = 932 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +2 Query: 197 GDAVRDASAGDARPGRRRH----ELVRQHAGATAVAPGGVSVAPLDLLLGA 337 G A R A AGD R G+RRH ++ G A GG A LL A Sbjct: 5 GGAERAAGAGDGRRGQRRHLRPGRVLAALRGPAAPGAGGARAALAAALLWA 55
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = +2 Query: 197 GDAVRDASAGDARPGRRRH----ELVRQHAGATAVAPGGVSVAPLDLLLGA 337 G A R A AGD R G+RRH ++ G A GG A LL A Sbjct: 5 GGAERAAGAGDGRRGQRRHLRPGRVLAALRGPAAPGAGGARAALAAALLWA 55
>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)| Length = 388 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -1 Query: 318 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 163 S A A A A A +SS P + AEA++ SP S + SGP Sbjct: 115 SAAAAAAAAAAAAAAAAAASSSGGPGPAGPAAAEAAKQCSPCSAAAQSSSGP 166
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype| 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1) Length = 995 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 12/60 (20%) Frame = -1 Query: 321 SSGATLTPP--GATAVAPACCRT----------SSWRRRPGRASPAEASRTASPSSPQRV 178 ++G T PP G ++ +PA RT ++ PG P SRT SP SP V Sbjct: 445 TNGETRVPPQNGGSSESPAAPRTIKVEAAEEPEATRASGPGEPGPQAPSRTPSPHSPNPV 504
>C71A9_SOYBN (O81970) Cytochrome P450 71A9 (EC 1.14.-.-) (P450 CP1)| Length = 499 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 122 TFPAQSISRLKNSHGPLQFTLCG 190 T P QS+ L N HGPL F G Sbjct: 51 TLPHQSLQYLSNKHGPLMFLQLG 73
>HPAB3_PSESM (Q2QCI9) Effector protein hopAB3 (Avirulence protein avrPtoB)| [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)] Length = 579 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 17/72 (23%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSW-----------------RRRPGRASPAEAS 211 +AP R ++ +++ P + V P +SS +RRP AS A AS Sbjct: 220 SAPPRTAARSSVRTPERSTVPPTSTESSSGSNQRTLLGRFAGLMTPNQRRPSSASNASAS 279 Query: 210 RTASPSSPQRVN 175 + SP RVN Sbjct: 280 QRPVDRSPPRVN 291
>IF2_XANOR (Q5GXU9) Translation initiation factor IF-2| Length = 906 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = -1 Query: 339 AAPRRRSSGATLTPPGATAVAPACCRTSSWRR--RPGRASPAEASRTASPSSPQRVN 175 +AP A TP A A A SS R RPG ASP ASR ++P+ P N Sbjct: 184 SAPAPAPVAAAPTPSAAAPAARAPSSPSSAPRPSRPGGASP--ASRPSTPARPDDRN 238
>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3| (Voltage-gated potassium channel subunit Kv3.3) (KSHIIID) Length = 889 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -1 Query: 327 RRSSGATLTPP--GATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQ 184 R+++GA PP G + PA C TS+ ++PG A PS PQ Sbjct: 733 RKATGAPPLPPHAGVSQAPPASCPTSTPTQQPGYPPSGRA-----PSPPQ 777
>BGAL_KLEPN (P06219) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 1034 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +2 Query: 50 WRFGLR-GEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTLCGLDGDAVRDASAG 226 W +G G+ PN +F ++FP+ P S+ K++ QFTL VR S Sbjct: 593 WAYGGDFGDKPNDRQFCMNGLVFPDRTPHPSLVEAKHAQQYFQFTLLSTSPLRVRIISEY 652 Query: 227 DARP 238 RP Sbjct: 653 LFRP 656
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 291 ATAVAPACCRTSSWRRRPGRASPAEASRTASP 196 +T+ AP+ RT P RA+P +RTASP Sbjct: 157 STSTAPSPSRTLPSSSSPSRATPQLPTRTASP 188
>HCN2_MOUSE (O88703) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) (Hyperpolarization-activated cation channel 1) (HAC-1) Length = 863 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/67 (34%), Positives = 30/67 (44%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGPWE 157 A R S+ P G A +PA + P R PA +RTA+P SP R + + P Sbjct: 788 ASRPLSASQPSLPHGVPAPSPAASARPASSSTP-RLGPAPTARTAAP-SPDRRDSASPGA 845 Query: 156 FFSLDIL 136 LD L Sbjct: 846 ASGLDPL 852
>Y1336_HALSA (P20378) Hypothetical UPF0152 protein Vng1336c| Length = 151 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/70 (30%), Positives = 28/70 (40%) Frame = +2 Query: 131 AQSISRLKNSHGPLQFTLCGLDGDAVRDASAGDARPGRRRHELVRQHAGATAVAPGGVSV 310 A I + HG L F G +V DAS G+ R HE + H GG++ Sbjct: 10 AALIQSYVDDHGLLSFL-----GVSVEDASDGEMRLRIPYHEKLTNHGPGEGDVHGGIAA 64 Query: 311 APLDLLLGAA 340 +D G A Sbjct: 65 TLIDTAGGLA 74
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -1 Query: 318 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQRVN*SGP 163 S A A A A A +SS P + AEA++ SP S + SGP Sbjct: 115 SAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGP 166
>WN10B_PLEJO (P28132) Protein Wnt-10b (Fragment)| Length = 117 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 Query: 169 RTVGIFQPRYTLGRERLREKYVHIRESPLIWALATKAESP 50 + G+F PR L ++RL ++ V+ +SP TK +SP Sbjct: 38 KNTGVFHPR-RLKKKRLAKELVYFEKSPDFCERDTKVDSP 76
>OPGD1_RALSO (Q8XUX6) Glucans biosynthesis protein D 1 precursor| Length = 535 Score = 27.7 bits (60), Expect = 6.8 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Frame = -1 Query: 306 LTPPGATAVAPACCRT----SSWRRRPGRASPAEASRTASPSSPQRVN*SGPWEFFSL-- 145 LTP A+AV+PA T +W RR RA A R + + P + G W+ + Sbjct: 21 LTPSTASAVSPASAATEPFDEAWLRRRARALAAGPYRKRNTALPPPLAALG-WDAYQSIG 79 Query: 144 ----DILWAG 127 LWAG Sbjct: 80 ARADHALWAG 89
>NEOR_STRCY (P14501) Neomycin resistance protein| Length = 437 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 18/58 (31%) Frame = -1 Query: 327 RRSSGATL---TP----------PGATAVAPACCRTS-----SWRRRPGRASPAEASR 208 RRS ATL TP PGATA A A TS S R+RPGR +A R Sbjct: 187 RRSGPATLARSTPGFRPPTGARSPGATAGARATASTSSSSVRSGRQRPGRVHRQDAGR 244
>SWC5_USTMA (Q4P6D5) SWR1-complex protein 5| Length = 376 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -1 Query: 318 SGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQ 184 S +P T+ APA ++S P SPA S ++SPS PQ Sbjct: 245 SSQIASPTSTTSSAPAPSASAS---APLPTSPASTSTSSSPSRPQ 286
>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein| (ALG-2-interacting protein 1) (Fragment) Length = 401 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 312 ATLTPPGATAVAPACCRTSSWR--RRPGRASPAEASRTASPSSP 187 A PP A A APA T+S + PG A P +A P+ P Sbjct: 297 ANRVPPAAAATAPAGVGTASAAPPQTPGSAPPPQAQGPPYPTYP 340
>BVCP_NPVAC (P06545) DNA-binding protein (Arginine-rich protein 6.9 kDa) (Basic| viral core protein) (Nucleocapsid protein) Length = 54 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = -1 Query: 330 RRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTAS 199 RRR +T T G+T R+S +RRRPGR SR+ S Sbjct: 3 RRRRRSSTGTTYGSTRRR----RSSGYRRRPGRPRTYRRSRSRS 42
>PCP1_YEAST (P53259) Rhomboid protein 1, mitochondrial precursor (EC| 3.4.21.105) (Processing of cytochrome c peroxidase protein 1) (Mitochondrial distribution and morphology protein 37) Length = 346 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +2 Query: 17 N*IFSYLGPNQWRFGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQFTLCGLD 196 N +++ LG N FGL + P WRF Y+L + + IS + ++ +F G++ Sbjct: 144 NLVYALLGINVAVFGL-WQLPKCWRFLQKYMLLQKDYVTSKISIIGSAFSHQEFWHLGMN 202
>UNG_HHV11 (P10186) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 334 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 9/67 (13%) Frame = -1 Query: 336 APRRRSSGATLTPP---------GATAVAPACCRTSSWRRRPGRASPAEASRTASPSSPQ 184 +PRRR S TPP A P +S RPG A R++ P++ Sbjct: 10 SPRRRPSSPRRTPPRDGTPPQKADADDPTPGASNDASTETRPGSGGEPAACRSSGPAALL 69 Query: 183 RVN*SGP 163 +GP Sbjct: 70 AALEAGP 76
>ARMX2_HUMAN (Q7L311) Armadillo repeat-containing X-linked protein 2 (Protein| ALEX2) (ARM protein lost in epithelial cancers on chromosome X 2) Length = 632 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 11/61 (18%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRT-----------SSWRRRPGRASPAEASRTASPSS 190 APR + PPG A T + PG ASP EA+ P++ Sbjct: 166 APREAETSRAAVPPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPAT 225 Query: 189 P 187 P Sbjct: 226 P 226
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS 190 +PRRR S TPP P R+ S RR R+S + + ++S SS Sbjct: 314 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSS 362
>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 56 FGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQ 175 +G R P++W F+ L + +SISR K +HG Q Sbjct: 100 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQ 139
>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 56 FGLRGEGPNQWRFSYMYVLFPETFPAQSISRLKNSHGPLQ 175 +G R P++W F+ L + +SISR K +HG Q Sbjct: 98 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQ 137
>FUSA_BURCE (P24126) Fusaric acid resistance protein fusA precursor| Length = 530 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -1 Query: 297 PGATAVAPACCRTSSWRRRPGRASP 223 PG A+ P R + RRPGRA P Sbjct: 380 PGGRAIQPDDRRRAQGHRRPGRADP 404
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Frame = -1 Query: 306 LTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPS-----SPQRVN*SGPWEFFSL 145 +TPP + P+C R SS A S T +P+ SPQR+ PW SL Sbjct: 261 MTPPTTLTMCPSCERVSS----SAATVTAAPSTTTTPTVVGRPSPQRLT---PWTAISL 312
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS 190 +PRRR S TPP P R+ S RR R+S + + ++S SS Sbjct: 312 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS 360
>TKRA_ENTAG (P58000) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)| (2-ketoaldonate reductase) Length = 323 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/57 (24%), Positives = 27/57 (47%) Frame = +2 Query: 176 FTLCGLDGDAVRDASAGDARPGRRRHELVRQHAGATAVAPGGVSVAPLDLLLGAAHF 346 FT+ ++G + + RRRH+ ++QH G++A A + +G +F Sbjct: 23 FTVTAINGLSPETIAEHGGAGARRRHDRLQQHGGSSAAGENAKLRAASTISVGYDNF 79
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS 190 +PRRR S TPP P R+ S RR R+S + + ++S SS Sbjct: 316 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS 364
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 27.3 bits (59), Expect = 8.8 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -1 Query: 336 APRRRSSGATLTPPGATAVAPACCRTSSWRRRPGRASPAEASRTASPSS 190 +PRRR S TPP P R+ S RR R+S + + ++S SS Sbjct: 316 SPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,914,381 Number of Sequences: 219361 Number of extensions: 1146268 Number of successful extensions: 4107 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 3861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4083 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
