ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predic... 127 3e-26
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
3dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
5dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
6gb|AY103740.1| Zea mays PCO120652 mRNA sequence 105 1e-19
7gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence 90 7e-15
8gb|AY109245.1| Zea mays PCO147899 mRNA sequence 86 1e-13
9gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
10gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
12dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
13dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
14dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
15dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
17gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomi... 44 0.36
18emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N... 44 0.36
19gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 1... 42 1.4
20gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cance... 42 1.4
21gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence 42 1.4
22gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, co... 42 1.4
23gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, comple... 42 1.4
24gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, co... 42 1.4
25gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, co... 42 1.4
26gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, compl... 40 5.6
27gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
28gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
29gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome... 40 5.6
30emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in... 40 5.6
31gb|BC048021.1| Xenopus laevis enzymatic glycosylation-regulating... 40 5.6
32ref|XM_737168.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.6
33gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, c... 40 5.6
34emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 i... 40 5.6
35gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, compl... 40 5.6
36gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, compl... 40 5.6
37ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA 40 5.6
38gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone... 40 5.6
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
40gb|AC106892.3| Homo sapiens BAC clone RP11-55L3 from 4, complete... 40 5.6
41gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, comple... 40 5.6
42gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete ... 40 5.6
43emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chro... 40 5.6
44emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, co... 40 5.6
45dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 5.6
46emb|AL132857.4|CNS01DTS Human chromosome 14 DNA sequence BAC R-8... 40 5.6
47dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 5.6 
>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score =  127 bits (64), Expect = 3e-26
 Identities = 76/80 (95%)
 Strand = Plus / Minus

                                                                        
Query: 341  ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
            |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 3111 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 3052

                                
Query: 401  ggtcttgctccttattctga 420
            ||||||||||||||||||||
Sbjct: 3051 ggtcttgctccttattctga 3032
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 3e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                            
Query: 341      ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
                |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 10020837 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 10020896

                                    
Query: 401      ggtcttgctccttattctga 420
                ||||||||||||||||||||
Sbjct: 10020897 ggtcttgctccttattctga 10020916
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>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score =  127 bits (64), Expect = 3e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                          
Query: 341    ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
              |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 101119 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 101178

                                  
Query: 401    ggtcttgctccttattctga 420
              ||||||||||||||||||||
Sbjct: 101179 ggtcttgctccttattctga 101198
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>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score =  127 bits (64), Expect = 3e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                         
Query: 341   ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
             |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 48394 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 48453

                                 
Query: 401   ggtcttgctccttattctga 420
             ||||||||||||||||||||
Sbjct: 48454 ggtcttgctccttattctga 48473
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>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score =  127 bits (64), Expect = 3e-26
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                          
Query: 341    ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
              |||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||
Sbjct: 115330 ttaactgcctcccttctgcttgagggtaatcttgtctcctaagctgagtgcgattccctg 115389

                                  
Query: 401    ggtcttgctccttattctga 420
              ||||||||||||||||||||
Sbjct: 115390 ggtcttgctccttattctga 115409
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>gb|AY103740.1| Zea mays PCO120652 mRNA sequence
          Length = 1013

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                       
Query: 341 ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
           ||||||||| |||||||||||||| ||||||||| | || ||||||||||||||||| ||
Sbjct: 631 ttaactgccacccttctgcttgagagtaatcttgtcacctaagctgagtgcaattccctg 572

                            
Query: 401 ggtcttgctccttattc 417
           |||||||||||||||||
Sbjct: 571 ggtcttgctccttattc 555
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>gb|BT017052.1| Zea mays clone EL01N0353H03.c mRNA sequence
          Length = 1032

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                       
Query: 341 ttaactgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttg 400
           ||||||||| || ||||||||||| || |||||| | || ||||||||||||||||| ||
Sbjct: 638 ttaactgccacctttctgcttgagagtgatcttgtcccctaagctgagtgcaattccctg 579

                            
Query: 401 ggtcttgctccttattc 417
           |||||||||||||||||
Sbjct: 578 ggtcttgctccttattc 562
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>gb|AY109245.1| Zea mays PCO147899 mRNA sequence
          Length = 751

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtct 405
           ||||||||||||| || ||||| |||||| |||| |||||||| ||||||||||||||||
Sbjct: 711 tgcctcccttctgttttagggtgatcttgtctcctaagctgagcgcaattccttgggtct 652

                          
Query: 406 tgctccttattctga 420
           |||| ||||| ||||
Sbjct: 651 tgcttcttatcctga 637
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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                         
Query: 345   ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
             |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 16550 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 16609

                             
Query: 405   ttgctccttattctga 420
             || |||| ||||||||
Sbjct: 16610 ttactccgtattctga 16625
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>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24
              map S20116S, complete sequence
          Length = 174210

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                          
Query: 345    ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
              |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 166015 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 166074

                              
Query: 405    ttgctccttattctga 420
              || |||| ||||||||
Sbjct: 166075 ttactccgtattctga 166090
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                           
Query: 345     ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
               |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 3648878 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3648937

                               
Query: 405     ttgctccttattctga 420
               || |||| ||||||||
Sbjct: 3648938 ttactccgtattctga 3648953
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>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full
            insert sequence
          Length = 3332

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 345  ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
            |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909

                            
Query: 405  ttgctccttattctga 420
            || |||| ||||||||
Sbjct: 2908 ttactccgtattctga 2893
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>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full
            insert sequence
          Length = 3332

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 345  ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
            |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 2968 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2909

                            
Query: 405  ttgctccttattctga 420
            || |||| ||||||||
Sbjct: 2908 ttactccgtattctga 2893
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>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full
            insert sequence
          Length = 3363

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 345  ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
            |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 2999 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 2940

                            
Query: 405  ttgctccttattctga 420
            || |||| ||||||||
Sbjct: 2939 ttactccgtattctga 2924
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>dbj|AK061958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F11, full
            insert sequence
          Length = 1741

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 345  ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
            |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 1377 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 1318

                            
Query: 405  ttgctccttattctga 420
            || |||| ||||||||
Sbjct: 1317 ttactccgtattctga 1302
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 67/76 (88%)
 Strand = Plus / Plus

                                                                           
Query: 345     ctgcctcccttctgcttgagggtaatcttgcctcccaagctgagtgcaattccttgggtc 404
               |||||||||||||| |||||||| |||||| | || |||||||| || ||||||||||||
Sbjct: 3657572 ctgcctcccttctgtttgagggtgatcttgtcgcctaagctgagggcgattccttgggtc 3657631

                               
Query: 405     ttgctccttattctga 420
               || |||| ||||||||
Sbjct: 3657632 ttactccgtattctga 3657647
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>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 306   ctacatgacacaattgcaacagattg 331
             |||||||| |||||||||||||||||
Sbjct: 20673 ctacatgagacaattgcaacagattg 20648
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>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains
              the SNAP91 gene for synaptosomal-associated protein, 91 kD
              homolog (mouse) (KIAA0656) and a CpG island, complete
              sequence
          Length = 167018

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 232    aatcttttgtacattataaaaa 253
              ||||||||||||||||||||||
Sbjct: 106168 aatcttttgtacattataaaaa 106189
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>gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 129 of 218 of the
            complete genome
          Length = 11901

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 95   gttttttgtcaaaaaaggcct 115
            |||||||||||||||||||||
Sbjct: 4932 gttttttgtcaaaaaaggcct 4912
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>gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51315

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   tcttctcatccctctctttaa 233
             |||||||||||||||||||||
Sbjct: 29023 tcttctcatccctctctttaa 29043
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>gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence
          Length = 39112

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 36   cgaaatacagtatctcaatcc 56
            |||||||||||||||||||||
Sbjct: 5828 cgaaatacagtatctcaatcc 5808
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>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence
          Length = 101116

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   tcttcctcttctcatccctct 227
             |||||||||||||||||||||
Sbjct: 82774 tcttcctcttctcatccctct 82794
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>gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, complete sequence
          Length = 169579

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 211   cctcttctcatccctctcttt 231
             |||||||||||||||||||||
Sbjct: 41686 cctcttctcatccctctcttt 41706
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>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence
          Length = 170801

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 207  tcttcctcttctcatccctct 227
            |||||||||||||||||||||
Sbjct: 7996 tcttcctcttctcatccctct 8016
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>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   atgacacaattgcaacagatt 330
             |||||||||||||||||||||
Sbjct: 73824 atgacacaattgcaacagatt 73844
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>gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, complete cds
          Length = 987

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 atggaagggagttgggagag 139
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117
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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    atcttttgtacattataaaa 252
              ||||||||||||||||||||
Sbjct: 157323 atcttttgtacattataaaa 157304
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   atcttttgtacattataaaa 252
             ||||||||||||||||||||
Sbjct: 28118 atcttttgtacattataaaa 28099
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>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence
          Length = 209579

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tcttcctcttctcatccctc 226
             ||||||||||||||||||||
Sbjct: 64584 tcttcctcttctcatccctc 64565
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>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete
              sequence
          Length = 135495

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    gtacattataaaaacatctt 259
              ||||||||||||||||||||
Sbjct: 118337 gtacattataaaaacatctt 118318
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>gb|BC048021.1| Xenopus laevis enzymatic glycosylation-regulating gene, mRNA (cDNA
            clone MGC:52826 IMAGE:4884583), complete cds
          Length = 3336

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  ttttgtacattataaaaaca 255
            ||||||||||||||||||||
Sbjct: 3216 ttttgtacattataaaaaca 3235
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>ref|XM_737168.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000048.02.0)
           partial mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 232 aatcttttgtacattataaaaaca 255
           |||||||||||||||| |||||||
Sbjct: 324 aatcttttgtacattagaaaaaca 347
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>gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, complete sequence
          Length = 150453

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   gggtaatcttgcctcccaag 383
             ||||||||||||||||||||
Sbjct: 95346 gggtaatcttgcctcccaag 95327
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>emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 in linkage group 10,
            complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  atggaagggagttgggagag 139
            ||||||||||||||||||||
Sbjct: 2324 atggaagggagttgggagag 2343
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>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tcacatctattcttacacca 92
              ||||||||||||||||||||
Sbjct: 114772 tcacatctattcttacacca 114791
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>gb|AC068207.6| Homo sapiens chromosome 8, clone RP11-26K8, complete sequence
          Length = 168843

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   cccttctgcttgagggtaat 370
             ||||||||||||||||||||
Sbjct: 29210 cccttctgcttgagggtaat 29229
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>ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 atggaagggagttgggagag 139
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117
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>gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone MGC:110381
           IMAGE:7410517), complete cds
          Length = 968

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 atggaagggagttgggagag 139
           ||||||||||||||||||||
Sbjct: 81  atggaagggagttgggagag 100
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 233      atcttttgtacattataaaa 252
                ||||||||||||||||||||
Sbjct: 17897369 atcttttgtacattataaaa 17897350
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>gb|AC106892.3| Homo sapiens BAC clone RP11-55L3 from 4, complete sequence
          Length = 164051

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tcttcctcttctcatccctc 226
              ||||||||||||||||||||
Sbjct: 129969 tcttcctcttctcatccctc 129950
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>gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, complete sequence
          Length = 110512

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    acaaacttcacatctattct 85
             ||||||||||||||||||||
Sbjct: 22462 acaaacttcacatctattct 22481
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>gb|AC006030.2| Homo sapiens BAC clone RP11-1P9 from 2, complete sequence
          Length = 89352

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   ctcccttctgcttgagggta 368
             ||||||||||||||||||||
Sbjct: 72452 ctcccttctgcttgagggta 72433
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>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete
            sequence
          Length = 97756

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  aatcttttgtacattataaa 251
            ||||||||||||||||||||
Sbjct: 6181 aatcttttgtacattataaa 6162
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>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   gtacattataaaaacatctt 259
             ||||||||||||||||||||
Sbjct: 72225 gtacattataaaaacatctt 72206
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>dbj|AP006305.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-53M8, complete sequence
          Length = 185588

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cccttctgcttgagggtaat 370
              ||||||||||||||||||||
Sbjct: 134566 cccttctgcttgagggtaat 134585
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>emb|AL132857.4|CNS01DTS Human chromosome 14 DNA sequence BAC R-896J10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 237    tttgtacattataaaaacatcttt 260
              ||||||||||||||||||| ||||
Sbjct: 106494 tttgtacattataaaaacaacttt 106517
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>dbj|AP000072.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene
           region, section 8/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 351 cccttctgcttgagggtaat 370
           ||||||||||||||||||||
Sbjct: 911 cccttctgcttgagggtaat 892


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,184,065
Number of Sequences: 3902068
Number of extensions: 4184065
Number of successful extensions: 80088
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79909
Number of HSP's gapped (non-prelim): 179
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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