>CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related
            mesenchymal modulator) (CReMM) (Chromatin remodeling
            factor CHROM1) (Peroxisomal proliferator-activated
            receptor A-inter
          Length = 2897

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 275  SSFSTCSHSGGEWLSCSSCVCALAGSAGAETTQGSSSNA 391
            SS S+CSHS     S SS  C+ A S+ + +T  SSS++
Sbjct: 2151 SSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSS 2189

>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 275  SSFSTCSHSGGEWLSCSSCVCALAGSAGAETTQGSSSNA 391
            SS S+CSHS     S SS  C+ A S+ + ++  SSS++
Sbjct: 2151 SSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSS 2189

>DAX1_RAT (P70503) Nuclear receptor 0B1 (Nuclear receptor DAX-1)|
          Length = 472

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 293 SHSGGEWLSCSSCVCALAGSAGAETTQ 373
           +H GGEW   S C   + G  G ++TQ
Sbjct: 167 AHRGGEWWQLSYCTHNVGGPEGLQSTQ 193

>MSX2_HUMAN (P35548) Homeobox protein MSX-2 (Hox-8)|
          Length = 267

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 231 NQMPFTSNGFLGEKSPPSAHAPIPAVSGLAARHACARLQVPLVPRQHRALQA 386
           + +PF+    + +K PP   +P+PA S  A     A L+ PL+   H A +A
Sbjct: 43  SSLPFSVEALMSDKKPPKEASPLPAESASAG----ATLR-PLLLSGHGAREA 89

>TONB_HAEDU (O51810) Protein tonB|
          Length = 279

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -1

Query: 420 DSKTASQYVSALLEEPCVVSAPAEPASA--HTHDEQLSHSP 304
           DS  + + V+ALLE+P V  AP E  S    T DE+    P
Sbjct: 39  DSPLSIELVAALLEQPQVAVAPEEVTSTEPETFDEEPEPEP 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,987,385
Number of Sequences: 219361
Number of extensions: 1385190
Number of successful extensions: 3601
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3601
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)