>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 232 tttcttctcagcctaaccgatgacccgcagttgctcgaaaaaggcggtgagcttcctcat 291
           |||||||||||| | || |||||||   |||||||| || || |||||||||||||||||
Sbjct: 796 tttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttcctcat 737

                    
Query: 292 gccctcctc 300
           | |||||||
Sbjct: 736 gtcctcctc 728

>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.074
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 96     tttgaattttctataaatgtgacatca 122
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188

>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 94    catttgaattttctataaatgt 115
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687

>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    atttgaattttctataaatgt 115
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 30       cactcacagatcaacatcatt 50
                |||||||||||||||||||||
Sbjct: 18717892 cactcacagatcaacatcatt 18717872



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 149     tatcaacttccaaacaaaaat 169
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822

>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 149    tatcaacttccaaacaaaaat 169
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064

>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   tatcaacttccaaacaaaaat 169
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457

>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    cactcacagatcaacatcatt 50
             |||||||||||||||||||||
Sbjct: 43643 cactcacagatcaacatcatt 43623

>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 232 tttcttctcagcctaaccgatgacccgcagttgctcgaaaaaggcggtgagcttcctcat 291
           |||||||||||| | || |||||||   ||||| || || || ||||||||||| |||||
Sbjct: 451 tttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagctttctcat 510

                    
Query: 292 gccctcctc 300
           | |||||||
Sbjct: 511 gtcctcctc 519

>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    aatgtgacatcaccaccatcc 131
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002

>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    ccatttgaattttctataaa 112
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189

>gb|AC147651.4| Homo sapiens BAC clone RP13-689E11 from 7, complete sequence
          Length = 162139

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 290  atgccctcctcttggacactgggg 313
            ||||| ||||||||||||||||||
Sbjct: 6538 atgccgtcctcttggacactgggg 6561

>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence
          Length = 187758

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   cttcctcatgccctcctctt 302
             ||||||||||||||||||||
Sbjct: 44294 cttcctcatgccctcctctt 44275

>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aacttccaaacaaaaatgcc 172
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766

>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  aacttccaaacaaaaatgcc 172
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668

>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gaattttctataaatgtgac 118
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743

>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     gaattttctataaatgtgac 118
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223

>dbj|AK155624.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730040C13
           product:unclassifiable, full insert sequence
          Length = 4454

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 283 cttcctcatgccctcctctt 302
           ||||||||||||||||||||
Sbjct: 750 cttcctcatgccctcctctt 769

>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  attttctataaatgtgacat 120
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980

>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    aacttccaaacaaaaatgcc 172
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621

>tpg|BK001273.1| TPA: TPA_exp: Mycoplasma fermentans strain PG18 composite
           integrative conjugal element ICEF-II, partial sequence
          Length = 17111

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   aaaaagttgcttttgaagtg 20
           ||||||||||||||||||||
Sbjct: 451 aaaaagttgcttttgaagtg 470

>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     tgaattttctataaatgtga 117
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076

>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     catttgaattttctataaat 113
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080

>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   attttctataaatgtgacat 120
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793

>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gaattttctataaatgtgac 118
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711

>gb|AY168960.1| Mycoplasma fermentans ORF472 gene, partial cds; integrative conjugal
            element ICEF-IIC, partial sequence
          Length = 4355

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaaagttgcttttgaagtg 20
            ||||||||||||||||||||
Sbjct: 1136 aaaaagttgcttttgaagtg 1155

>gb|AY168957.1| Mycoplasma fermentans hypothetical protein gene, partial cds; ORF406
            gene, complete cds; insertion sequence ISMi1, and
            integrative conjugal element ICEF-IIB, partial sequence
          Length = 5983

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaaagttgcttttgaagtg 20
            ||||||||||||||||||||
Sbjct: 3629 aaaaagttgcttttgaagtg 3648

>gb|AY168955.1| Mycoplasma fermentans strain PG18 ORF228 gene, complete cds;
            insertion sequence ISMf1, complete sequence; ORF700 gene,
            complete cds; ORF251 pseudogene and integrative conjugal
            element ICEF-IIA, partial sequence
          Length = 10979

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaaagttgcttttgaagtg 20
            ||||||||||||||||||||
Sbjct: 5572 aaaaagttgcttttgaagtg 5591

>gb|AY168953.1| Mycoplasma fermentans strain PG18 LicA (licA), and LepA (lepA),
            complete cds; insertion sequence ISMi1, partial sequence;
            integrative conjugal element ICEF-IA, complete sequence
          Length = 27891

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    aaaaagttgcttttgaagtg 20
            ||||||||||||||||||||
Sbjct: 3117 aaaaagttgcttttgaagtg 3136

>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   atgtgacatcaccaccatcc 131
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026

>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     gaattttctataaatgtgac 118
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377

>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    tgaattttctataaatgtga 117
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358

>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   gaattttctataaatgtgac 118
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699

>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     tttgaattttctataaatgt 115
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461

>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
              sequence
          Length = 202686

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gtggacactcaacactcaca 37
              ||||||||||||||||||||
Sbjct: 191713 gtggacactcaacactcaca 191732

>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete
             sequence
          Length = 196812

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   cttcctcatgccctcctctt 302
             ||||||||||||||||||||
Sbjct: 76295 cttcctcatgccctcctctt 76314


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,530,465
Number of Sequences: 3902068
Number of extensions: 3530465
Number of successful extensions: 68416
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68325
Number of HSP's gapped (non-prelim): 91
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)