ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full... 389 e-105
2gb|AY109428.1| Zea mays CL501_1 mRNA sequence 68 2e-08
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 1e-06
4gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare str... 62 1e-06
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
6dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
7dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
8dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
9dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 7e-05
10gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, comple... 44 0.27
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
12dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
13dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
14emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, ... 42 1.1
15emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BA... 42 1.1
16emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chr... 42 1.1
17gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome... 40 4.2
18gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 40 4.2
19emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, comple... 40 4.2
20emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 i... 40 4.2
21emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G1... 40 4.2
22gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integr... 40 4.2
23gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 gen... 40 4.2
24emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 ... 40 4.2
25gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct... 40 4.2
26dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN f... 40 4.2
27gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's H... 40 4.2
28gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome... 40 4.2
29gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-... 40 4.2
30tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gen... 40 4.2
31gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9... 40 4.2
32dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
33gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, comple... 40 4.2
34emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chro... 40 4.2
35gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, co... 40 4.2
36dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
37emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 i... 40 4.2
38emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-5... 40 4.2
39gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence 40 4.2
40emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in... 40 4.2
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
42emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chrom... 40 4.2 
>gb|BT009089.1| Triticum aestivum clone wkm2c.pk0002.a3:fis, full insert mRNA
           sequence
          Length = 774

 Score =  389 bits (196), Expect = e-105
 Identities = 288/317 (90%), Gaps = 5/317 (1%)
 Strand = Plus / Minus

                                                                       
Query: 9   gatatacaatttatgcggcacaaaatgtccaggatgagtatccctaga---aaattctga 65
           ||||||||||||||||||||||||||||||||| ||||||||||||||   |||||||||
Sbjct: 695 gatatacaatttatgcggcacaaaatgtccaggttgagtatccctagaggaaaattctga 636

                                                                       
Query: 66  aaccaagaaactaacagcttaaatacggtaaagtagaagtaacacaataacaacacaata 125
           ||||||||||||||||| ||||||||||| |  ||  ||| | |||||||||||||||||
Sbjct: 635 aaccaagaaactaacagtttaaatacggtgatctaatagttatacaataacaacacaata 576

                                                                       
Query: 126 caattcacactaacttccatgaaacagcacagctgt--atgctcataactgaataatttt 183
           ||||||||||||||||||||| ||||||||  ||||  ||||||||||| ||||||||||
Sbjct: 575 caattcacactaacttccatggaacagcacgcctgtgtatgctcataaccgaataatttt 516

                                                                       
Query: 184 gacggaatatccatccttaagttacccgtcacttacttgataagagactccatagcttca 243
           ||||||||| | ||| | ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 515 gacggaataccgatcttcaagtttcccgtcacttaattgataagagactccatagcttca 456

                                                                       
Query: 244 aagaatagaggcacaaactccctgttgggagtcttcactgcacactttgcaccaggagca 303
           |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| ||
Sbjct: 455 aagaatagaggcacaaactccctgtttggagtcttgactgcacacttggcaccaggaaca 396

                            
Query: 304 ccaacggcagcagtaag 320
           ||||| |||||||||||
Sbjct: 395 ccaacagcagcagtaag 379
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>gb|AY109428.1| Zea mays CL501_1 mRNA sequence
          Length = 3187

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                       
Query: 226 agagactccatagcttcaaagaatagaggcacaaactccctgttgggagtcttcactgca 285
           |||| |||||||||||||||||| ||||| || | |||||| || || || || ||||||
Sbjct: 356 agagcctccatagcttcaaagaagagaggaaccatctccctatttggtgttttgactgca 415

                                             
Query: 286 cactttgcaccaggagcaccaacggcagcagtaa 319
           |||||  |||||||| ||||||| ||||| ||||
Sbjct: 416 cacttcacaccaggaacaccaaccgcagctgtaa 449
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                            
Query: 218      acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
                |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 13561552 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13561611

                                                           
Query: 278      tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
                | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 13561612 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 13561654
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>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                          
Query: 218    acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
              |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 121443 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 121502

                                                         
Query: 278    tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
              | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 121503 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 121545
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                            
Query: 218      acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
                |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 13557427 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 13557486

                                                           
Query: 278      tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
                | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 13557487 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 13557529
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>dbj|AK071247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087B10, full
            insert sequence
          Length = 1904

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                        
Query: 218  acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
            |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 1728 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1669

                                                       
Query: 278  tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
            | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 1668 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 1626
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>dbj|AK069084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007F10, full
            insert sequence
          Length = 1842

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                        
Query: 218  acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
            |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 1479 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 1420

                                                       
Query: 278  tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
            | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 1419 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 1377
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>dbj|AK059077.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A07, full
           insert sequence
          Length = 834

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Minus

                                                                       
Query: 218 acttgataagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtct 277
           |||||| |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| |
Sbjct: 546 acttgagaagagactccatggcttcgaagaagagagccaccatctccttgtttggagttt 487

                                                      
Query: 278 tcactgcacactttgcaccaggagcaccaacggcagcagtaag 320
           | || ||||||||  | |||||| |||| || |||||||||||
Sbjct: 486 tgaccgcacacttcacgccaggaacaccgactgcagcagtaag 444
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>dbj|AK068938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D19, full
            insert sequence
          Length = 2979

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 79/96 (82%)
 Strand = Plus / Minus

                                                                        
Query: 225  aagagactccatagcttcaaagaatagaggcacaaactccctgttgggagtcttcactgc 284
            |||||||||||| ||||| ||||| |||| ||| | |||| |||| ||||| || || ||
Sbjct: 2706 aagagactccatggcttcgaagaagagagccaccatctccttgtttggagttttgaccgc 2647

                                                
Query: 285  acactttgcaccaggagcaccaacggcagcagtaag 320
            ||||||  | |||||| |||| || |||||||||||
Sbjct: 2646 acacttcacgccaggaacaccgactgcagcagtaag 2611
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>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence
          Length = 95280

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 165   ctcataactgaataattttgac 186
             ||||||||||||||||||||||
Sbjct: 57533 ctcataactgaataattttgac 57512
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 31      aaatgtccaggatgagtatccc 52
               ||||||||||||||||||||||
Sbjct: 7266918 aaatgtccaggatgagtatccc 7266897
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>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
           BAC clone:OSJNBa0062A09
          Length = 173541

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 31  aaatgtccaggatgagtatccc 52
           ||||||||||||||||||||||
Sbjct: 881 aaatgtccaggatgagtatccc 860
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>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 31     aaatgtccaggatgagtatccc 52
              ||||||||||||||||||||||
Sbjct: 119023 aaatgtccaggatgagtatccc 119002
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>emb|AL161554.2|ATCHRIV54 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 54
          Length = 198715

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    ataacaacacaatacaattca 132
              |||||||||||||||||||||
Sbjct: 188407 ataacaacacaatacaattca 188427
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>emb|AL031187.1|ATT6K22 Arabidopsis thaliana DNA chromosome 4, BAC clone T6K22 (ESSAII project)
          Length = 89219

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 112   ataacaacacaatacaattca 132
             |||||||||||||||||||||
Sbjct: 45130 ataacaacacaatacaattca 45150
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>emb|AL807815.3| Mouse DNA sequence from clone RP23-207H16 on chromosome 4, complete
             sequence
          Length = 206914

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aaaggcaagatatacaattta 21
             |||||||||||||||||||||
Sbjct: 50133 aaaggcaagatatacaattta 50153
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>gb|AC127314.4| Mus musculus BAC clone RP23-217N4 from chromosome 18, complete sequence
          Length = 232320

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    aataacaacacaatacaatt 130
              ||||||||||||||||||||
Sbjct: 151220 aataacaacacaatacaatt 151239
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>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    aataacaacacaatacaatt 130
              ||||||||||||||||||||
Sbjct: 196667 aataacaacacaatacaatt 196648
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>emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, complete sequence
          Length = 31143

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    aattctgaaaccaagaaact 77
             ||||||||||||||||||||
Sbjct: 26630 aattctgaaaccaagaaact 26611
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>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7,
             complete sequence
          Length = 168455

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tagaagtaacacaataacaa 118
             ||||||||||||||||||||
Sbjct: 80485 tagaagtaacacaataacaa 80504
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>emb|AL078462.9|HSJ159G19 Human DNA sequence from clone RP1-159G19 on chromosome 6q14.1-14.3
             Contains the 3' part of a novel gene, complete sequence
          Length = 88509

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   aagtaacacaataacaacacaata 125
             |||||||||||||| |||||||||
Sbjct: 22962 aagtaacacaataataacacaata 22939
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>gb|AF517750.1| Mus musculus chromosome 18 NFS107 proviral integration site
          Length = 1655

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 aataacaacacaatacaatt 130
           ||||||||||||||||||||
Sbjct: 52  aataacaacacaatacaatt 71
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>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete
              sequence
          Length = 149978

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 218    acttgataagagactccatagcttcaaagaatagag 253
              |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 109697 acttgagaagagactccatggcttcgaagaagagag 109662
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>emb|BX324007.16| Zebrafish DNA sequence from clone CH211-233C16 in linkage group 16,
              complete sequence
          Length = 165294

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     gtaaagtagaagtaacacaa 112
              ||||||||||||||||||||
Sbjct: 116674 gtaaagtagaagtaacacaa 116693
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>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete
             sequence
          Length = 115747

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttccatgaaacagcacagct 159
             ||||||||||||||||||||
Sbjct: 33060 ttccatgaaacagcacagct 33041
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>dbj|AK136716.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched
           library, clone:9230028P05 product:unclassifiable, full
           insert sequence
          Length = 1057

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 ttccatgaaacagcacagct 159
           ||||||||||||||||||||
Sbjct: 543 ttccatgaaacagcacagct 562
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>gb|AC120670.8| Rattus norvegicus 2 BAC CH230-23N23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 228097

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ctagaaaattctgaaaccaa 71
             ||||||||||||||||||||
Sbjct: 16993 ctagaaaattctgaaaccaa 17012
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>gb|AC154501.2| Mus musculus BAC clone RP24-87F14 from chromosome 14, complete sequence
          Length = 215658

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   acaataacaacacaatacaattca 132
             |||||||||||| |||||||||||
Sbjct: 47726 acaataacaacaaaatacaattca 47749
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>gb|AF298202.1| Dictyostelium discoideum putative transposon DDT-B, complete
           sequence
          Length = 5471

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 aacacaataacaacacaata 125
           ||||||||||||||||||||
Sbjct: 797 aacacaataacaacacaata 778



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 106 aacacaataacaacacaata 125
           ||||||||||||||||||||
Sbjct: 752 aacacaataacaacacaata 733
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>tpg|BK001437.1| TPA: TPA_exp: Homo sapiens SULT6B1 (SULT6B1) gene, complete cds;
             alternatively spliced
          Length = 34001

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   atgctcataactgaataatt 181
             ||||||||||||||||||||
Sbjct: 22591 atgctcataactgaataatt 22610
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>gb|AC017067.4|AC017067 Homo sapiens BAC clone RP11-370B11 from 9, complete sequence
          Length = 191373

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    aaaattctgaaaccaagaaa 75
             ||||||||||||||||||||
Sbjct: 33949 aaaattctgaaaccaagaaa 33968
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 218      acttgataagagactccatagcttcaaagaatagag 253
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16491598 acttgagaagagactccatggcttcgaagaagagag 16491563
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>gb|AC007899.3| Homo sapiens BAC clone RP11-531C11 from 2, complete sequence
          Length = 118195

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   atgctcataactgaataatt 181
             ||||||||||||||||||||
Sbjct: 13587 atgctcataactgaataatt 13606
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>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete
             sequence
          Length = 213629

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttccatgaaacagcacagct 159
             ||||||||||||||||||||
Sbjct: 57543 ttccatgaaacagcacagct 57524
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>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence
          Length = 232529

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    agaggcacaaactccctgtt 269
              ||||||||||||||||||||
Sbjct: 146507 agaggcacaaactccctgtt 146488
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>dbj|AK066946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G05, full
           insert sequence
          Length = 575

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 218 acttgataagagactccatagcttcaaagaatagag 253
           |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 399 acttgagaagagactccatggcttcgaagaagagag 364
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>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20,
              complete sequence
          Length = 158302

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    acaataacaacacaatacaa 128
              ||||||||||||||||||||
Sbjct: 126271 acaataacaacacaatacaa 126290
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>emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-550M19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175725

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   tagaggcacaaactccctgt 268
             ||||||||||||||||||||
Sbjct: 98529 tagaggcacaaactccctgt 98548
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>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence
          Length = 122469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   cacactttgcaccaggagca 303
             ||||||||||||||||||||
Sbjct: 47122 cacactttgcaccaggagca 47103
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>emb|BX004808.5| Zebrafish DNA sequence from clone CH211-51B23 in linkage group 16,
             complete sequence
          Length = 184760

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gtaaagtagaagtaacacaa 112
             ||||||||||||||||||||
Sbjct: 47402 gtaaagtagaagtaacacaa 47383



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gtaaagtagaagtaacacaa 112
             ||||||||||||||||||||
Sbjct: 46938 gtaaagtagaagtaacacaa 46919
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 218      acttgataagagactccatagcttcaaagaatagag 253
                |||||| |||||||||||| ||||| ||||| ||||
Sbjct: 16499839 acttgagaagagactccatggcttcgaagaagagag 16499804
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>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete
             sequence
          Length = 233417

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   ttccatgaaacagcacagct 159
             ||||||||||||||||||||
Sbjct: 85626 ttccatgaaacagcacagct 85645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,949,238
Number of Sequences: 3902068
Number of extensions: 2949238
Number of successful extensions: 59321
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59139
Number of HSP's gapped (non-prelim): 179
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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