>gb|AY359936.1| Trachelomonas grandis large subunit ribosomal RNA gene, partial
           sequence
          Length = 1448

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 209 agcaactctactcctgagtgc 229
           |||||||||||||||||||||
Sbjct: 306 agcaactctactcctgagtgc 286

>gb|AC087490.6| Homo sapiens chromosome 15, clone RP11-810H22, complete sequence
          Length = 183342

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 137   atctgggagaaaataacaacaaaat 161
             |||| ||||||||||||||||||||
Sbjct: 63489 atctaggagaaaataacaacaaaat 63465

>gb|AC021439.9| Homo sapiens chromosome 15, clone RP11-484P15, complete sequence
          Length = 206030

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 137    atctgggagaaaataacaacaaaat 161
              |||| ||||||||||||||||||||
Sbjct: 192132 atctaggagaaaataacaacaaaat 192108

>gb|AC134460.4| Mus musculus BAC clone RP23-373D18 from chromosome 10, complete sequence
          Length = 174545

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     ggattgtgtcggttcagatg 107
              ||||||||||||||||||||
Sbjct: 165780 ggattgtgtcggttcagatg 165761

>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence
          Length = 262581

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   gggagaaaataacaacaaaa 160
             ||||||||||||||||||||
Sbjct: 28267 gggagaaaataacaacaaaa 28286

>emb|Z70206.1|CEC49F8 Caenorhabditis elegans Cosmid C49F8, complete sequence
          Length = 39435

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   gggagaaaataacaacaaaa 160
             ||||||||||||||||||||
Sbjct: 17996 gggagaaaataacaacaaaa 18015

>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence
          Length = 209021

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aatctgggagaaaataacaa 155
              ||||||||||||||||||||
Sbjct: 183695 aatctgggagaaaataacaa 183714

>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   ctactcctgagtgcaataaa 235
             ||||||||||||||||||||
Sbjct: 32634 ctactcctgagtgcaataaa 32653

>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of
              the Ptprd gene for receptor type protein tyrosine
              phosphatase D and a CpG island, complete sequence
          Length = 199012

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    aatctgggagaaaataacaa 155
              ||||||||||||||||||||
Sbjct: 141052 aatctgggagaaaataacaa 141071

>gb|AC024864.1|AC024864 Caenorhabditis elegans clone Y74C9A, complete sequence
          Length = 47629

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   gagaaaataacaacaaaatc 162
             ||||||||||||||||||||
Sbjct: 16253 gagaaaataacaacaaaatc 16272

>gb|AC024206.1| Caenorhabditis elegans cosmid Y74C9A, complete sequence
          Length = 47629

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   gagaaaataacaacaaaatc 162
             ||||||||||||||||||||
Sbjct: 16253 gagaaaataacaacaaaatc 16272

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 8       agcaacagtattatcaccaa 27
               ||||||||||||||||||||
Sbjct: 1986887 agcaacagtattatcaccaa 1986906

>gb|AC153883.6| Mus musculus 10 BAC RP23-368G20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181524

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     ggattgtgtcggttcagatg 107
              ||||||||||||||||||||
Sbjct: 154373 ggattgtgtcggttcagatg 154392

>emb|AL049870.3|CNS0000S Human chromosome 14 DNA sequence BAC R-857B24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205035

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ctgggagaaaataacaacaa 158
             ||||||||||||||||||||
Sbjct: 41667 ctgggagaaaataacaacaa 41686

>gb|AC153533.4| Mus musculus 10 BAC RP23-474K10 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187069

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ggattgtgtcggttcagatg 107
             ||||||||||||||||||||
Sbjct: 77082 ggattgtgtcggttcagatg 77101

>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence
          Length = 215582

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    gggagaaaataacaacaaaa 160
              ||||||||||||||||||||
Sbjct: 105737 gggagaaaataacaacaaaa 105718


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,419,733
Number of Sequences: 3902068
Number of extensions: 2419733
Number of successful extensions: 43911
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43884
Number of HSP's gapped (non-prelim): 27
length of query: 244
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 222
effective length of database: 17,147,199,772
effective search space: 3806678349384
effective search space used: 3806678349384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)