ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl31f09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... 31 0.88
2HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (E... 30 1.2
3OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1 29 3.4
4SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 28 5.7
5SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 28 5.7
6TENS1_HUMAN (Q9HBL0) Tensin-1 28 7.5
7SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment) 28 7.5
8PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit... 28 7.5
9OR1D5_PANTR (Q9TUA6) Olfactory receptor 1D5 28 7.5
10OR1D5_PANPA (Q9TU95) Olfactory receptor 1D5 28 7.5
11AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC ... 27 9.8

>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220|
           antigen) [Contains: Insulin receptor alpha subunit;
           Insulin receptor beta subunit]
          Length = 1382

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +3

Query: 114 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSRTPQNATRSFLL---PFLCHFF 278
           F++ QD  H  + S +  C Q V+ N  CIP+     +    N   +  L   P +CH  
Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLL 342

Query: 279 TGQQPCDHI 305
            G++  D +
Sbjct: 343 EGEKTIDSV 351



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>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 93   PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSRTPQ 233
            P  S+A    +QDHS ++S   + P+  ++  S  P  NI    SSRT Q
Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826



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>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1|
          Length = 310

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 241 VAFCGVREL*MLFCGMHEMLSRTSCGQFIWMDVLLL 134
           ++FCG  E+  +FC +  +L  T CG+    +VL++
Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200



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>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 287 LSSEEMTQEWKKEASGCILWCTRTLNVILWDA*NVVQ 177
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 287 LSSEEMTQEWKKEASGCILWCTRTLNVILWDA*NVVQ 177
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 220  LVHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 318
            L HH+M  P  + FH   +SS  S+ ATT  +P+
Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245



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>SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment)|
          Length = 280

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 122 HPRSQQKNIHPNELSTTSPGQHFMHPT 202
           +P S Q   +PN L     G +FMHPT
Sbjct: 24  YPTSNQLKSYPNGLLNPFNGTNFMHPT 50



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>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 13/61 (21%)
 Frame = +3

Query: 123 IQDHSKRT--SIQMNCPQLVLDNISCIPQNN-----------IQSSRTPQNATRSFLLPF 263
           I++H K+   ++    P+ VL  +  +P  +           +Q   T  NATR FLLPF
Sbjct: 75  IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134

Query: 264 L 266
           L
Sbjct: 135 L 135



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>OR1D5_PANTR (Q9TUA6) Olfactory receptor 1D5|
          Length = 312

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 241 VAFCGVREL*MLFCGMHEMLSRTSC 167
           V FCG RE+  LFC M+ +L R +C
Sbjct: 166 VTFCGPREIHYLFCDMY-ILLRLAC 189



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>OR1D5_PANPA (Q9TU95) Olfactory receptor 1D5|
          Length = 312

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 241 VAFCGVREL*MLFCGMHEMLSRTSC 167
           V FCG RE+  LFC M+ +L R +C
Sbjct: 166 VTFCGPREIHYLFCDMY-ILLRLAC 189



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>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)|
           (Transaminase A)
          Length = 417

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 320 AFGASYVVARLLSSEEMTQEWKKE 249
           A+GA  +VA+LL + E+T++W K+
Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,236,450
Number of Sequences: 219361
Number of extensions: 960002
Number of successful extensions: 2438
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2438
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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