Clone Name | rbastl31f09 |
---|---|
Clone Library Name | barley_pub |
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 30.8 bits (68), Expect = 0.88 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +3 Query: 114 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSRTPQNATRSFLL---PFLCHFF 278 F++ QD H + S + C Q V+ N CIP+ + N + L P +CH Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLL 342 Query: 279 TGQQPCDHI 305 G++ D + Sbjct: 343 EGEKTIDSV 351
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Frame = +3 Query: 93 PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSRTPQ 233 P S+A +QDHS ++S + P+ ++ S P NI SSRT Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>OR9Q1_HUMAN (Q8NGQ5) Olfactory receptor 9Q1| Length = 310 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = -3 Query: 241 VAFCGVREL*MLFCGMHEMLSRTSCGQFIWMDVLLL 134 ++FCG E+ +FC + +L T CG+ +VL++ Sbjct: 166 LSFCGTSEIDFIFCDLPPLLKLT-CGESYTQEVLII 200
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 287 LSSEEMTQEWKKEASGCILWCTRTLNVILWDA*NVVQ 177 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 287 LSSEEMTQEWKKEASGCILWCTRTLNVILWDA*NVVQ 177 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1 Query: 220 LVHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 318 L HH+M P + FH +SS S+ ATT +P+ Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245
>SMOX1_SCHMA (Q26600) Homeobox protein SMOX-1 (Fragment)| Length = 280 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 122 HPRSQQKNIHPNELSTTSPGQHFMHPT 202 +P S Q +PN L G +FMHPT Sbjct: 24 YPTSNQLKSYPNGLLNPFNGTNFMHPT 50
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 13/61 (21%) Frame = +3 Query: 123 IQDHSKRT--SIQMNCPQLVLDNISCIPQNN-----------IQSSRTPQNATRSFLLPF 263 I++H K+ ++ P+ VL + +P + +Q T NATR FLLPF Sbjct: 75 IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134 Query: 264 L 266 L Sbjct: 135 L 135
>OR1D5_PANTR (Q9TUA6) Olfactory receptor 1D5| Length = 312 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 241 VAFCGVREL*MLFCGMHEMLSRTSC 167 V FCG RE+ LFC M+ +L R +C Sbjct: 166 VTFCGPREIHYLFCDMY-ILLRLAC 189
>OR1D5_PANPA (Q9TU95) Olfactory receptor 1D5| Length = 312 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -3 Query: 241 VAFCGVREL*MLFCGMHEMLSRTSC 167 V FCG RE+ LFC M+ +L R +C Sbjct: 166 VTFCGPREIHYLFCDMY-ILLRLAC 189
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/24 (45%), Positives = 19/24 (79%) Frame = -2 Query: 320 AFGASYVVARLLSSEEMTQEWKKE 249 A+GA +VA+LL + E+T++W K+ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKD 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,236,450 Number of Sequences: 219361 Number of extensions: 960002 Number of successful extensions: 2438 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 2298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2438 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)