>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0028C22, complete sequence
          Length = 154228

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                          
Query: 373    atcagcactctatacggactgcgccgctttgtgtcgatatgaacttgggcttcctgatca 432
              ||||||| ||||| || || |||||||||||||| || |||||||||||||||||||| |
Sbjct: 114483 atcagcattctatccgaaccgcgccgctttgtgttgagatgaacttgggcttcctgataa 114424

                                
Query: 433    cctgctcc-agcactgga 449
              |||||||| |||||||||
Sbjct: 114423 cctgctccaagcactgga 114406

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                            
Query: 373      atcagcactctatacggactgcgccgctttgtgtcgatatgaacttgggcttcctgatca 432
                ||||||| ||||| || || |||||||||||||| || |||||||||||||||||||| |
Sbjct: 19787216 atcagcattctatccgaaccgcgccgctttgtgttgagatgaacttgggcttcctgataa 19787157

                                  
Query: 433      cctgctcc-agcactgga 449
                |||||||| |||||||||
Sbjct: 19787156 cctgctccaagcactgga 19787139

>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                         
Query: 373   atcagcactctatacggactgcgccgctttgtgtcgatatgaacttgggcttcctgatca 432
             ||||||| ||||| || || |||||||||||||| || |||||||||||||||||||| |
Sbjct: 11656 atcagcattctatccgaaccgcgccgctttgtgttgagatgaacttgggcttcctgataa 11597

                               
Query: 433   cctgctcc-agcactgga 449
             |||||||| |||||||||
Sbjct: 11596 cctgctccaagcactgga 11579

>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0450E05
          Length = 176553

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                          
Query: 373    atcagcactctatacggactgcgccgctttgtgtcgatatgaacttgggcttcctgatca 432
              ||||||| ||||| || || |||||||||||||| || |||||||||||||||||||| |
Sbjct: 132902 atcagcattctatccgaaccgcgccgctttgtgttgagatgaacttgggcttcctgataa 132843

                                
Query: 433    cctgctcc-agcactgga 449
              |||||||| |||||||||
Sbjct: 132842 cctgctccaagcactgga 132825

>dbj|AK065778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036C01, full
            insert sequence
          Length = 2727

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                        
Query: 373  atcagcactctatacggactgcgccgctttgtgtcgatatgaacttgggcttcctgatca 432
            ||||||| ||||| || || |||||||||||||| || |||||||||||||||||||| |
Sbjct: 2372 atcagcattctatccgaaccgcgccgctttgtgttgagatgaacttgggcttcctgataa 2313

                              
Query: 433  cctgctcc-agcactgga 449
            |||||||| |||||||||
Sbjct: 2312 cctgctccaagcactgga 2295

>emb|AJ890024.1| Zea mays partial mRNA for putative translation initiation factor
           IF-2 (if-2 gene), cultivar A69Y, from endosperm tissue
          Length = 640

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 51/56 (91%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 405 gtcgatatgaacttgggcttcctgatcacctgctcca-gcactggatggtatcccc 459
           ||||| ||||||||||||||||| ||||||||||||| |||||| ||| |||||||
Sbjct: 518 gtcgagatgaacttgggcttcctaatcacctgctccacgcactgtatgatatcccc 463

>gb|AC118935.7| Mus musculus chromosome 5, clone RP24-172P15, complete sequence
          Length = 168119

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 114   attgcagaacttatgaaaactg 135
             ||||||||||||||||||||||
Sbjct: 19382 attgcagaacttatgaaaactg 19403

>emb|AL355357.13| Human DNA sequence from clone RP11-69I22 on chromosome 6, complete
              sequence
          Length = 116261

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    gaaaactgcaagaatatatga 148
              |||||||||||||||||||||
Sbjct: 104289 gaaaactgcaagaatatatga 104269

>gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromosome 6, complete
            sequence
          Length = 197430

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 128  gaaaactgcaagaatatatga 148
            |||||||||||||||||||||
Sbjct: 2429 gaaaactgcaagaatatatga 2409

>gb|AC182427.3| Pan troglodytes BAC clone CH251-692F19 from chromosome 6, complete
             sequence
          Length = 168190

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   gaaaactgcaagaatatatga 148
             |||||||||||||||||||||
Sbjct: 74650 gaaaactgcaagaatatatga 74630

>ref|NM_069932.2| Caenorhabditis elegans C42C1.5 (guanyltransferase) mRNA, complete
           cds
          Length = 1440

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 312 ttcaaacaaatggttgaattc 332
           |||||||||||||||||||||
Sbjct: 370 ttcaaacaaatggttgaattc 390

>gb|AF043695.2| Caenorhabditis elegans cosmid C42C1, complete sequence
          Length = 44686

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   ttcaaacaaatggttgaattc 332
             |||||||||||||||||||||
Sbjct: 18984 ttcaaacaaatggttgaattc 18964

>ref|XM_711369.1| Candida albicans SC5314 p100-like putative TFIIE-interacting
            transcriptional coactivator (CaO19_7328), mRNA
          Length = 2706

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 297  caaaattttggtcagttcaaacaa 320
            |||||||||| |||||||||||||
Sbjct: 2032 caaaattttgctcagttcaaacaa 2055

>gb|AC133161.4| Mus musculus BAC clone RP24-534C7 from chromosome 1, complete sequence
          Length = 157891

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tgactccagtttcctctctc 165
             ||||||||||||||||||||
Sbjct: 42564 tgactccagtttcctctctc 42545

>gb|AC124951.19| Medicago truncatula clone mth2-7p23, complete sequence
          Length = 124973

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 144   tatgactccagtttcctctctcaaatgt 171
             |||||||||| ||| |||||||||||||
Sbjct: 26131 tatgactccatttttctctctcaaatgt 26104

>gb|AC158580.3| Mus musculus chromosome 1, clone RP24-97G17, complete sequence
          Length = 159618

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   tgactccagtttcctctctc 165
             ||||||||||||||||||||
Sbjct: 33174 tgactccagtttcctctctc 33193

>emb|Z98752.16|HS138B7 Human DNA sequence from clone RP1-138B7 on chromosome 20q13.12 Contains
             the 3' end of the L3MBTL gene for l(3)mbt-like
             (Drosophila), the SGK2 gene for serum/glucocorticoid
             regulated kinase 2, the 5' end of the C20orf9 gene (NGD5,
             CGI-53), an HSPC194 pseudogene and a CpG island, complete
             sequence
          Length = 84323

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   gccaaagcatctcaatcttt 207
             ||||||||||||||||||||
Sbjct: 39858 gccaaagcatctcaatcttt 39839

>gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, complete sequence
          Length = 175283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    tagccttccctctacattgattgc 118
             ||||||||||||||||| ||||||
Sbjct: 41307 tagccttccctctacatggattgc 41330

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    tcgataggtgctgggtgttg 243
              ||||||||||||||||||||
Sbjct: 267250 tcgataggtgctgggtgttg 267269

>ref|NM_207852.1| Eremothecium gossypii AAL043Cp (AAL043C), mRNA
          Length = 1617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  tcgataggtgctgggtgttg 243
            ||||||||||||||||||||
Sbjct: 1225 tcgataggtgctgggtgttg 1206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,937,475
Number of Sequences: 3902068
Number of extensions: 3937475
Number of successful extensions: 72500
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72447
Number of HSP's gapped (non-prelim): 53
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)