Clone Information

BLAST Search Result

Clone Name	rbastl31f03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)	115	5e-26
2	LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)	100	2e-21
3	LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase...	99	4e-21
4	LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)	97	1e-20
5	LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena...	94	1e-19
6	LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)	80	2e-15
7	LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)	80	2e-15
8	LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)	79	4e-15
9	LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)	75	7e-14
10	LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)	75	7e-14
11	LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)	75	7e-14
12	LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)	74	2e-13
13	LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)	74	2e-13
14	LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)	74	2e-13
15	LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)	69	7e-12
16	LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)	68	9e-12
17	LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)	68	9e-12
18	LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)	68	1e-11
19	LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)	67	3e-11
20	LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur...	53	4e-07
21	LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1...	52	5e-07
22	LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC...	49	6e-06
23	LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC...	47	2e-05
24	LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC...	46	4e-05
25	LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)	45	6e-05
26	LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13...	41	0.002
27	LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)	40	0.002
28	CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Panc...	33	0.25
29	ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor AT...	32	0.93
30	GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f...	31	1.2
31	ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor AT...	31	1.2
32	ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor AT...	31	1.2
33	SPI1_SOLTU (P58514) Serine protease inhibitor 1 precursor (PSPI-...	31	1.6
34	TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	30	2.1
35	SPI7_SOLTU (P30941) Serine protease inhibitor 7 precursor (PIG) ...	30	2.1
36	SPI6_SOLTU (Q41433) Probable serine protease inhibitor 6 precurs...	30	2.1
37	SPI2_SOLTU (P58515) Serine protease inhibitor 2 (PSPI-21) (PSPI-...	30	2.1
38	ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-...	30	3.5
39	HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic ...	29	4.6
40	ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog	29	4.6
41	VNUA_PRVKA (P33485) Probable nuclear antigen	25	5.4
42	ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoce...	29	6.0
43	YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor	29	6.0
44	PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantot...	29	6.0
45	C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Paraspo...	29	6.0
46	SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like prot...	29	6.0
47	AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)	28	7.9
48	CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor	28	7.9

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score =  115 bits (288), Expect = 5e-26
 Identities = 57/71 (80%), Positives = 61/71 (85%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            DAKAL+AFKRFGSRLV+IE RI DMN + ALKNRNGPV MPYMLLYPNTSD   EK  GL
Sbjct: 807  DAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGL 866

Query: 264  TAMGIPNSVSI 232
            TAMGIPNS+SI
Sbjct: 867  TAMGIPNSISI 877

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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score =  100 bits (249), Expect = 2e-21
 Identities = 50/71 (70%), Positives = 54/71 (76%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            D KALE FKRF  RLVEIE +++ MN DP LKNRNGP   PYMLLYPNTSD  G  A GL
Sbjct: 793  DPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKG-AAAGL 851

Query: 264  TAMGIPNSVSI 232
            TA GIPNS+SI
Sbjct: 852  TAKGIPNSISI 862

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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            DAKALEAFKRFG+RL EIE R++ MNKDP  KNR GP   PY LLYPNTSD  G+ A GL
Sbjct: 801  DAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGL 859

Query: 264  TAMGIPNSVSI 232
            +A GIPNS+SI
Sbjct: 860  SARGIPNSISI 870

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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 48/71 (67%), Positives = 55/71 (77%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            DA+ALEAF+RF  RLVEIE +++ MN D  LKNRNGP   PYMLLYPNTSD  G  A G+
Sbjct: 797  DARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTG-AAAGI 855

Query: 264  TAMGIPNSVSI 232
            TA GIPNS+SI
Sbjct: 856  TAKGIPNSISI 866

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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 94.4 bits (233), Expect = 1e-19
 Identities = 47/71 (66%), Positives = 55/71 (77%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            D KALEAFKRF  +LVEIE ++L+MNKDP LKNR GP   PY L++PNTSD  G  A G+
Sbjct: 794  DPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKG-AAEGI 852

Query: 264  TAMGIPNSVSI 232
            TA GIPNS+SI
Sbjct: 853  TARGIPNSISI 863

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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 40/71 (56%), Positives = 50/71 (70%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           DA  LEAFKRFG +L EIEK++++ NKD  L+NR GP  MPY LLYP++ +       GL
Sbjct: 790 DAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSEE-------GL 842

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 843 TFRGIPNSISI 853

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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 39/71 (54%), Positives = 51/71 (71%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D +ALEAFK+FG++L EIEK++   N D  L+NR+GPV MPY LLYP++ +       GL
Sbjct: 798 DKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE-------GL 850

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 851 TFRGIPNSISI 861

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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 79.3 bits (194), Expect = 4e-15
 Identities = 40/69 (57%), Positives = 49/69 (71%)
 Frame = -3

Query: 438 KALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGLTA 259
           KAL+AFKRFG +L EIE++I+  NKD +L+NRNGPV MPY +L P   D       GLT 
Sbjct: 800 KALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDE------GLTF 853

Query: 258 MGIPNSVSI 232
            GIPNS+SI
Sbjct: 854 RGIPNSISI 862

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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 37/71 (52%), Positives = 49/71 (69%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D +ALEAFKRFG++L +IE ++ + N D  L+NR GPV MPY LL P++ +       GL
Sbjct: 794 DTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSKE-------GL 846

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 847 TFRGIPNSISI 857

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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D+   EAFKRFG +L EIE+++   N D +L+NR GPV MPY LLYP++ +       GL
Sbjct: 803 DSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSEE-------GL 855

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 856 TCRGIPNSISI 866

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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 75.1 bits (183), Expect = 7e-14
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D KALEAFKRFGS+L  IE +I   N DP+L+NR GPV +PY LL+ ++ +       GL
Sbjct: 801 DKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEE-------GL 853

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 854 TFKGIPNSISI 864

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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 36/71 (50%), Positives = 50/71 (70%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D+KAL+AF++FG++L EIE+++   N D +L NR GPV +PY LL+PN+         GL
Sbjct: 803 DSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSE--------GL 854

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 855 TCRGIPNSISI 865

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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 37/72 (51%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALK-NRNGPVMMPYMLLYPNTSDANGEKALG 268
           D+KAL+AF++FG++L EIE++++  N DP+L+ NR GPV +PY LLYP++ +       G
Sbjct: 775 DSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE-------G 827

Query: 267 LTAMGIPNSVSI 232
           LT  GIPNS+SI
Sbjct: 828 LTFRGIPNSISI 839

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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 35/71 (49%), Positives = 52/71 (73%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D+KAL+AF++FG++L EIE ++ + N DP+L +R GPV +PY LL+P++ +       GL
Sbjct: 801 DSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE-------GL 853

Query: 264 TAMGIPNSVSI 232
           T  GIPNS+SI
Sbjct: 854 TFRGIPNSISI 864

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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           + +ALEAF++FG ++ EIEK I + N D  LKNR G V MPY LL+P++         G+
Sbjct: 796 EKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG-------GV 848

Query: 264 TAMGIPNSVSI 232
           T  GIPNSVSI
Sbjct: 849 TGRGIPNSVSI 859

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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 36/71 (50%), Positives = 46/71 (64%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D + L AF+RFG  L +IE RI+ MN   + KNR+GPV +PY LL+P + +       GL
Sbjct: 796 DKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSEE-------GL 848

Query: 264 TAMGIPNSVSI 232
           T  GIPNSVSI
Sbjct: 849 TGKGIPNSVSI 859

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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           DA  LEAFKRFG +L EIEK+++  N D  L+NR GP  MPY LLYP++ +       GL
Sbjct: 684 DAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSEE-------GL 736

Query: 264 TAMGI 250
           T  GI
Sbjct: 737 TFRGI 741

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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 36/71 (50%), Positives = 44/71 (61%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D + L AF RFG +L +IEK+I+  N D  L NR+GPV  PY LL+P +         GL
Sbjct: 798 DKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG-------GL 850

Query: 264 TAMGIPNSVSI 232
           T  GIPNSVSI
Sbjct: 851 TGKGIPNSVSI 861

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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 35/71 (49%), Positives = 45/71 (63%)
 Frame = -3

Query: 444 DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
           D + L AF+RFG++L +IEK+I+  N +  L NR GPV  PY LL+P +         GL
Sbjct: 797 DKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG-------GL 849

Query: 264 TAMGIPNSVSI 232
           T  GIPNSVSI
Sbjct: 850 TGKGIPNSVSI 860

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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 35/71 (49%), Positives = 41/71 (57%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            DA    A+  F +RL EIE  I   NKD  LKNR G  ++PY L+ P  SDA      G+
Sbjct: 878  DAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKP-FSDA------GV 930

Query: 264  TAMGIPNSVSI 232
            T MGIPNS SI
Sbjct: 931  TGMGIPNSTSI 941

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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 32/71 (45%), Positives = 39/71 (54%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            DA    A+  F +RL EIE  I   NKD  LKNR G  ++PY L+ P +         G+
Sbjct: 861  DAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDS-------GV 913

Query: 264  TAMGIPNSVSI 232
            T MGIPNS SI
Sbjct: 914  TGMGIPNSTSI 924

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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 26/71 (36%), Positives = 45/71 (63%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            D +  +AF+ F  ++ +I +++ + NKD + +NR+G  ++PY+LL P   + N   A  +
Sbjct: 864  DGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP--LNGNPMDAKTV 921

Query: 264  TAMGIPNSVSI 232
              MGIPNS+SI
Sbjct: 922  MEMGIPNSISI 932

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>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = -3

Query: 429  EAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYP---NTSDANGEKALGLTA 259
            +AF+ F     +I +++ + N DP  KNR+G  M+PY+LL P   + +D +      +  
Sbjct: 868  QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVME 927

Query: 258  MGIPNSVSI 232
            MGIPNS+SI
Sbjct: 928  MGIPNSISI 936

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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:3)
          Length = 896

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 28/65 (43%), Positives = 36/65 (55%)
 Frame = -3

Query: 426  AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGLTAMGIP 247
            AF++F  RL E E  I   N +P  KNR G  ++PY LL P +         G+T  GIP
Sbjct: 839  AFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEP-------GVTGRGIP 891

Query: 246  NSVSI 232
            NS+SI
Sbjct: 892  NSISI 896

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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 25/71 (35%), Positives = 39/71 (54%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            D  AL A + F + +   E+ I   N DP+ +NR G  ++PY L+ P++         G+
Sbjct: 836  DPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGP-------GI 888

Query: 264  TAMGIPNSVSI 232
            T  G+PNSV+I
Sbjct: 889  TCRGVPNSVTI 899

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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = -3

Query: 426  AFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGLTAMGIP 247
            AF+RF  +L  +E  I + N +  LKNR G  ++ Y LL P +         G+T MG+P
Sbjct: 839  AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEH-------GVTGMGVP 891

Query: 246  NSVSI 232
             S+SI
Sbjct: 892  YSISI 896

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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/71 (35%), Positives = 36/71 (50%)
 Frame = -3

Query: 444  DAKALEAFKRFGSRLVEIEKRILDMNKDPALKNRNGPVMMPYMLLYPNTSDANGEKALGL 265
            D  A+ A   F + +   E+ I   N D   KNR G  ++PY LL P++         G+
Sbjct: 855  DEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPP-------GV 907

Query: 264  TAMGIPNSVSI 232
            T  G+PNS+SI
Sbjct: 908  TCRGVPNSISI 918

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>CMGA_PIG (P04404) Chromogranin A precursor (CgA) [Contains: Pancreastatin;|
           Parastatin; WE-14] (Fragment)
          Length = 446

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 442 RQGARGVQEVRQPAGG--DREADPRHEQGPGAQEPERARDDALHAAVPQ 302
           R GA+  ++   P+ G  DRE  P  EQGP A+  E    +A   AVP+
Sbjct: 185 RPGAQAEEDHEGPSQGPVDREKGPSAEQGPQAEREEEEEAEAGEKAVPE 233

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>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (MXBP protein)
          Length = 487

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)
 Frame = +2

Query: 35  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 184
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 185 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 307
           G   T+  + RP S Q           SP+  +P   +  G
Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323

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>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +1

Query: 37  LSSPYQHHLRHNHHFPSSTNPW---QLVTATTQKPMKSNTIH 153
           L+  Y HH  H+HH PS  +P+    L  A    P ++  +H
Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214

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>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (HB16)
          Length = 487

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
 Frame = +2

Query: 35  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 184
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 185 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 307
           G   T+  + RP S Q           SP+  +P      G
Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323

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>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2)
          Length = 487

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%)
 Frame = +2

Query: 35  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 184
           H P  + ++    ++   P IPG   PQP +S+ K+           Q T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282

Query: 185 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 274
           G   T+  + RP S Q           SP+
Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312

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>SPI1_SOLTU (P58514) Serine protease inhibitor 1 precursor (PSPI-21)|
           (PSPI-21-6.3) [Contains: Serine protease inhibitor 1
           chain A; Serine protease inhibitor 1 chain B]
          Length = 221

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +2

Query: 266 SPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLF--------MSRIRFSISTSRL 409
           SP++ +P A+ V  Y+S  G    P RF+ + S F        +  I+F+ISTS+L
Sbjct: 69  SPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124

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>TRUB_GLOVI (Q7MBB8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 292

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 221 CSAQMETLLGMPMAVSPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLFMSRIRFSIST 400
           C A++  +LG           P A+ VL  +   G  T   RFLS G ++ + +RF +ST
Sbjct: 18  CIARLRRVLGERRIGHGGTLDPAATGVLPVAV--GRATRLLRFLSEGKVYRATVRFGLST 75

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>SPI7_SOLTU (P30941) Serine protease inhibitor 7 precursor (PIG) (PIGEN1)|
           (Allergen Sola t 4) (STPIB) (STPIA) (pKEN14-28) (pF4)
          Length = 221

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +2

Query: 266 SPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLF--------MSRIRFSISTSRL 409
           SP++ +P A+ +  Y+S  G    P RF+ + S F        +  I+F+ISTS+L
Sbjct: 69  SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124

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>SPI6_SOLTU (Q41433) Probable serine protease inhibitor 6 precursor (AM66)|
          Length = 221

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +2

Query: 266 SPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLF--------MSRIRFSISTSRL 409
           SP++ +P A+ +  Y+S  G    P RF+ + S F        +  I+F+ISTS+L
Sbjct: 69  SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 124

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>SPI2_SOLTU (P58515) Serine protease inhibitor 2 (PSPI-21) (PSPI-21-5.2)|
           [Contains: Serine protease inhibitor 2 chain A; Serine
           protease inhibitor 2 chain B]
          Length = 186

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
 Frame = +2

Query: 266 SPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLF--------MSRIRFSISTSRL 409
           SP++ +P A+ +  Y+S  G    P RF+ + S F        +  I+F+ISTS+L
Sbjct: 41  SPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTSKL 96

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>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1)
          Length = 487

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
 Frame = +2

Query: 35  HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 184
           H P  + ++    ++   P IPG   PQP +S+ K      +TQ     T  DT +   S
Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282

Query: 185 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 307
           G    +  + RP S Q           SP+  +P   +  G
Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323

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>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein|
           ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein
           ERA-1-399)
          Length = 331

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 37  LSSPYQHHLRHNHHFPSS 90
           +SSP+ HH  H+HH P +
Sbjct: 56  ISSPHHHHHHHHHHHPQT 73

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>ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog|
          Length = 343

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 430 RGVQEVRQPAGGDREADPRHEQGPGAQEPERARDDALHAAVPQH 299
           R V+E+ + A  +RE   RH+Q    QE ++  +   H+++ QH
Sbjct: 276 RAVKEINEQARREREEQERHKQ--QQQEKQQKIEQQTHSSIHQH 317

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 25.0 bits (53), Expect(2) = 5.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 16  RVLIHASLSSPYQHHLRHNHHFPSSTNPWQLVTATT 123
           R+ + ++ ++   HH +H+HH P   +     T TT
Sbjct: 10  RLSLPSTTTTRDHHHQQHHHHPPPPPSRTHFTTITT 45



 Score = 22.3 bits (46), Expect(2) = 5.4
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = +3

Query: 99  LATSYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDH 221
           L  S+  HP    + H+ P   R    P D   P    +DH
Sbjct: 65  LFLSFPPHPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDH 105

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>ADRB3_MACMU (Q28524) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3|
           adrenoreceptor)
          Length = 418

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 366 CSCRGSASRSPPAGCRTS*TPRAPWRP 446
           C C G   R P A  R + +PRAP RP
Sbjct: 361 CHCGGRLPREPCAADRPASSPRAPLRP 387

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>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor|
          Length = 1459

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 254  PMAVSPSAFSPLASDVLGYSSM*GIIT 334
            PM + P  FSP+ SDV G   M G+ T
Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457

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>PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid|
           kinase 1) (hPanK1) (hPanK)
          Length = 598

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 439 QGARGVQEVRQPAGGDREADPRHEQGP 359
           +G +G +EV + AGG  E   RH Q P
Sbjct: 71  RGGQGAEEVGESAGGGEERRVRHPQAP 97

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>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal|
           delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal
           protoxin) (79 kDa crystal protein)
          Length = 706

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 130 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 222
           P+ +NTI      PI+  RTD +RKK T+ +
Sbjct: 74  PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104

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>SMG7_MOUSE (Q5RJH6) Protein SMG7 (SMG-7 homolog) (EST1-like protein C)|
          Length = 1138

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 236  ETLLGMPMAVSPSAFSPLASDVLGYSSM*GIITGPFRFLSAGSLFMSRIRFSISTSRLP 412
            E +   P  + P+   PLAS + G S    ++  P   +S  S F+S   FS++  R P
Sbjct: 889  ELIFSNPPDLYPALLGPLAS-LPGRSLFKSLLEKPSELMSHSSSFLSLTGFSVNQERYP 946

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>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)|
          Length = 566

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
 Frame = +1

Query: 37  LSSPYQHHLRHNHHFPSS--------TNPWQLVTATTQKPMKSN 144
           + SP Q  L+H HH P+S        TN +Q+ T  + + +++N
Sbjct: 1   MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44

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>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor|
          Length = 1025

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 445 GRQGARGVQEVRQPAGGDREADPRHEQG 362
           G +G RG   VR P G   EA P+ +QG
Sbjct: 427 GERGPRGTPGVRGPRGDPGEAGPQGDQG 454


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.131    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,397,233
Number of Sequences: 219361
Number of extensions: 1072939
Number of successful extensions: 4266
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 3796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result